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Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds.

Varinder SinghSomdutt MujwarManjinder SinghRajesh Kumar GoelSheikh Fayaz Ahmad
Published in: Molecules (Basel, Switzerland) (2023)
Neurodegenerative diseases, such as Alzheimer's and Parkinson's, pose a significant global health challenge, emphasizing the need for novel neuroprotective agents. Basil ( Ocimum spp.) has been recognized for its therapeutic potential, and numerous studies have reported neuroprotective effects. In this manuscript, we present a computational protocol to extricate the underlying mechanism of action of basil compounds in neuroprotective effects. Molecular docking-based investigation of the chemical interactions between selected bioactive compounds from basil and key neuroprotective targets, including AChE, GSK3β, γ-secretase, and sirtuin2. Our results demonstrate that basil compound myricerone caffeoyl ester possesses a high affinity of -10.01 and -8.85 kcal/mol against GSK3β and γ-secretase, respectively, indicating their potential in modulating various neurobiological processes. Additionally, molecular dynamics simulations were performed to explore the protein-ligand complexes' stability and to analyze the bound basil compounds' dynamic behavior. This comprehensive computational investigation enlightens the putative mechanistic basis for the neuroprotective effects of basil compounds, providing a rationale for their therapeutic use in neurodegenerative disorders after further experimental validation.
Keyphrases
  • molecular dynamics simulations
  • molecular docking
  • global health
  • cerebral ischemia
  • signaling pathway
  • randomized controlled trial
  • public health
  • pi k akt
  • blood brain barrier
  • case control
  • amino acid