From DNA Copy Number Gains and Tumor Dependencies to Novel Therapeutic Targets for High-Risk Neuroblastoma.
Bieke DecaestekerKaat DurinkNadine Van RoyBram De WildeChristophe Van NesteStéphane Van HaverStephen S RobertsKatleen De PreterVermeirssen VanessaFrank SpelemanPublished in: Journal of personalized medicine (2021)
Neuroblastoma is a pediatric tumor arising from the sympatho-adrenal lineage and a worldwide leading cause of childhood cancer-related deaths. About half of high-risk patients die from the disease while survivors suffer from multiple therapy-related side-effects. While neuroblastomas present with a low mutational burden, focal and large segmental DNA copy number aberrations are highly recurrent and associated with poor survival. It can be assumed that the affected chromosomal regions contain critical genes implicated in neuroblastoma biology and behavior. More specifically, evidence has emerged that several of these genes are implicated in tumor dependencies thus potentially providing novel therapeutic entry points. In this review, we briefly review the current status of recurrent DNA copy number aberrations in neuroblastoma and provide an overview of the genes affected by these genomic variants for which a direct role in neuroblastoma has been established. Several of these genes are implicated in networks that positively regulate MYCN expression or stability as well as cell cycle control and apoptosis. Finally, we summarize alternative approaches to identify and prioritize candidate copy-number driven dependency genes for neuroblastoma offering novel therapeutic opportunities.
Keyphrases
- copy number
- genome wide
- mitochondrial dna
- dna methylation
- cell cycle
- circulating tumor
- bioinformatics analysis
- cell free
- genome wide identification
- single molecule
- oxidative stress
- poor prognosis
- end stage renal disease
- ejection fraction
- current status
- stem cells
- cell proliferation
- endoplasmic reticulum stress
- newly diagnosed
- transcription factor
- cell death
- peritoneal dialysis
- replacement therapy
- patient reported