The frequency and pathogenicity of BRCA1 and BRCA2 variants in the general Japanese population.
Masashi IdogawaTasuku MariyaYumi TanakaTsuyoshi SaitoHiroshi NakaseTakashi TokinoAkihiro SakuraiPublished in: Journal of human genetics (2024)
Hereditary breast and ovarian cancer syndrome (HBOC) resulting from pathogenic variants of BRCA1 or BRCA2 is the most common and well-documented hereditary tumor. Although founder variants have been identified in population-based surveys in various countries, the types of variants are not uniform across races and regions. Recently, the Tohoku Medical Megabank Organization (ToMMo) released whole-genome sequence data including approximately 54,000 individuals from the general population of the Tohoku area in Japan. We analyzed these data and comprehensively identified the prevalence of BRCA1/2 pathogenic and truncating variants. We believe that an accurate understanding of the unique distribution and characteristics of pathogenic BRCA1/2 variants in Japan through this analysis will enable better surveillance and intervention for HBOC patients, not only in Japan but also worldwide.
Keyphrases
- copy number
- breast cancer risk
- end stage renal disease
- healthcare
- electronic health record
- randomized controlled trial
- public health
- chronic kidney disease
- newly diagnosed
- risk factors
- gene expression
- big data
- machine learning
- cross sectional
- staphylococcus aureus
- prognostic factors
- data analysis
- artificial intelligence