Senescence of human pancreatic beta cells enhances functional maturation through chromatin reorganization and promotes interferon responsiveness.
Milan PatraAgnes KlochendlerReba CondiottiBinyamin KaffeSharona ElgavishZeina DrawshyDana AvrahamiMasashi NaritaMatan HofreeYotam DrierEran MeshorerYuval DorIttai Ben-PorathPublished in: Nucleic acids research (2024)
Senescent cells can influence the function of tissues in which they reside, and their propensity for disease. A portion of adult human pancreatic beta cells express the senescence marker p16, yet it is unclear whether they are in a senescent state, and how this affects insulin secretion. We analyzed single-cell transcriptome datasets of adult human beta cells, and found that p16-positive cells express senescence gene signatures, as well as elevated levels of beta-cell maturation genes, consistent with enhanced functionality. Senescent human beta-like cells in culture undergo chromatin reorganization that leads to activation of enhancers regulating functional maturation genes and acquisition of glucose-stimulated insulin secretion capacity. Strikingly, Interferon-stimulated genes are elevated in senescent human beta cells, but genes encoding senescence-associated secretory phenotype (SASP) cytokines are not. Senescent beta cells in culture and in human tissue show elevated levels of cytoplasmic DNA, contributing to their increased interferon responsiveness. Human beta-cell senescence thus involves chromatin-driven upregulation of a functional-maturation program, and increased responsiveness of interferon-stimulated genes, changes that could increase both insulin secretion and immune reactivity.
Keyphrases
- endothelial cells
- induced apoptosis
- genome wide
- cell cycle arrest
- single cell
- dna damage
- gene expression
- induced pluripotent stem cells
- endoplasmic reticulum stress
- type diabetes
- dendritic cells
- signaling pathway
- pluripotent stem cells
- cell death
- transcription factor
- metabolic syndrome
- rna seq
- stem cells
- genome wide identification
- mesenchymal stem cells
- copy number
- stress induced
- young adults
- poor prognosis
- pi k akt
- bioinformatics analysis