Molecular description of ANGPT2 associated colorectal carcinoma.
Marine JaryReyhan HasanovaAngélique VienotKamal AsgarovRomain LoyonCharline TiroleAdeline BouardEmeline OrillardElodie KlajerStefano KimJulien ViotElise ColleOlivier AdotéviOlivier BouchéThierry LecomteChristophe BorgJean P FeugeasPublished in: International journal of cancer (2020)
Angiopoietin-2 (ANGPT2) is a prognostic factor in metastatic colorectal cancer (CRC). Nevertheless, it remains to be elucidated which molecular characteristics make up the ANGPT2-related poor-prognosis CRC subset. Public transcriptomic datasets were collected from Gene Expression Omnibus GEO and with the TCGAbiolinks R-package for the TCGA. After appropriate normalization, differential expression analysis was performed using Benjamini and Hochberg method for false discovery rate. Plasma from two prospective clinical trials were used to investigate the clinical impact of ANGPT2-related biomarkers. In the 935 samples included in four annotated platforms (GPL) and derived from localized CRC, ANGPT2hi expression conferred a worst overall survival (HR = 1.20; p = 0.02). CRC stage, ANGPT2hi expression but not Consortium Molecular Subtype (CMS) predict overall survival in multivariate analysis. ANGPT2 expression was not correlated with a specific CMS nor to RAS, RAF, MSI, p53, CIN, CIMP genomic alterations. Gene expression analysis revealed that ANGPT2hi CRC subset is characterized by angiogenesis-related gene expression, presence of myeloid cells, stromal organization and resistance to chemotherapy. A prognostic model was proposed using seric levels of ANGPT2, STC1 and CD138 in 97 mCRC patients. Our results provide evidence that ANGPT2 is a prognostic factor in localized CRC and defined a specific CRC subset with potential clinical implementation.
Keyphrases
- poor prognosis
- prognostic factors
- gene expression
- long non coding rna
- clinical trial
- healthcare
- metastatic colorectal cancer
- dna methylation
- bone marrow
- small molecule
- induced apoptosis
- primary care
- copy number
- newly diagnosed
- high throughput
- emergency department
- randomized controlled trial
- immune response
- mental health
- ejection fraction
- acute myeloid leukemia
- risk assessment
- rna seq
- single molecule
- transcription factor
- quality improvement
- patient reported outcomes
- signaling pathway
- pi k akt
- cell cycle arrest
- endoplasmic reticulum stress
- cell death
- drug induced
- wound healing
- electronic health record
- rectal cancer
- adverse drug