Genome-wide association meta-analysis of corneal curvature identifies novel loci and shared genetic influences across axial length and refractive error.
Qiao FanAlfred PozarickijNicholas Y Q TanXiaobo GuoVirginie J M VerhoevenVeronique VitartJeremy A GuggenheimMasahiro MiyakeJ Willem L TidemanAnthony P KhawajaLiang ZhangStuart MacgregorRené HöhnPeng ChenGinevra BiinoJuho WedenojaSeyed Ehsan SaffariMilly S TedjaJing XieCarla Costa LançaYa-Xing WangSrujana SahebjadaJohanna MazurAlireza MirshahiNicholas G MartinSeyhan YazarCraig E PennellMaurice K H YapAnnechien E G HaarmanClair A EnthovenJanRoelof Pollingnull nullnull nullAlex W HewittVincent W V JaddoeCornelia M van DuijnCaroline HaywardOzren PolasekE-Shyong TaiHosoda YoshikatsuPirro G HysiTerri L YoungAkitaka TsujikawaJie Jing WangPaul MitchellNorbert PfeifferOlavi PärssinenPaul J FosterMaurizio FossarelloShea Ping YipCathy WilliamsChristopher J HammondJost Bruno JonasMingguang HeDavid A MackeyTien-Yin WongCaroline C W KlaverSeang-Mei SawPaul N BairdChing-Yu ChengPublished in: Communications biology (2020)
Corneal curvature, a highly heritable trait, is a key clinical endophenotype for myopia - a major cause of visual impairment and blindness in the world. Here we present a trans-ethnic meta-analysis of corneal curvature GWAS in 44,042 individuals of Caucasian and Asian with replication in 88,218 UK Biobank data. We identified 47 loci (of which 26 are novel), with population-specific signals as well as shared signals across ethnicities. Some identified variants showed precise scaling in corneal curvature and eye elongation (i.e. axial length) to maintain eyes in emmetropia (i.e. HDAC11/FBLN2 rs2630445, RBP3 rs11204213); others exhibited association with myopia with little pleiotropic effects on eye elongation. Implicated genes are involved in extracellular matrix organization, developmental process for body and eye, connective tissue cartilage and glycosylation protein activities. Our study provides insights into population-specific novel genes for corneal curvature, and their pleiotropic effect in regulating eye size or conferring susceptibility to myopia.
Keyphrases
- genome wide
- optical coherence tomography
- extracellular matrix
- genome wide association
- cataract surgery
- wound healing
- dna methylation
- systematic review
- copy number
- gene expression
- electronic health record
- small molecule
- artificial intelligence
- randomized controlled trial
- binding protein
- bioinformatics analysis
- deep learning