Human Germ Cell Tumors are Developmental Cancers: Impact of Epigenetics on Pathobiology and Clinic.
João LoboAd J M GillisCarmen JerónimoRui M HenriqueLeendert H J LooijengaPublished in: International journal of molecular sciences (2019)
Current (high throughput omics-based) data support the model that human (malignant) germ cell tumors are not initiated by somatic mutations, but, instead through a defined locked epigenetic status, representative of their cell of origin. This elegantly explains the role of both genetic susceptibility as well as environmental factors in the pathogenesis, referred to as 'genvironment'. Moreover, it could also explain various epidemiological findings, including the rising incidence of this type of cancer in Western societies. In addition, it allows for identification of clinically relevant and informative biomarkers both for diagnosis and follow-up of individual patients. The current status of these findings will be discussed, including the use of high throughput DNA methylation profiling for determination of differentially methylated regions (DMRs) as well as chromosomal copy number variation (CNV). Finally, the potential value of methylation-specific tumor DNA fragments (i.e., XIST promotor) as well as embryonic microRNAs as molecular biomarkers for cancer detection in liquid biopsies will be presented.
Keyphrases
- copy number
- dna methylation
- germ cell
- high throughput
- genome wide
- single cell
- mitochondrial dna
- endothelial cells
- papillary thyroid
- gene expression
- end stage renal disease
- current status
- ejection fraction
- pluripotent stem cells
- induced pluripotent stem cells
- primary care
- chronic kidney disease
- newly diagnosed
- single molecule
- peritoneal dialysis
- squamous cell carcinoma
- childhood cancer
- risk factors
- stem cells
- high resolution
- mesenchymal stem cells
- bone marrow
- cell free
- mass spectrometry
- risk assessment
- patient reported
- cross sectional
- loop mediated isothermal amplification
- ultrasound guided
- climate change
- human health
- young adults
- solid phase extraction
- sensitive detection