Priestia megaterium Metabolism: Isolation, Identification of Naringenin Analogues and Genes Elevated Associated with Nanoparticle Intervention.
Nada S Al-TheyabHatem A AbuelizzGadah Abdulaziz Al-HamoudAhmad M AldossaryMingtao LiangPublished in: Current issues in molecular biology (2023)
The impact of gold nanoparticles (AuNPs) on the biosynthetic manipulation of Priestia megaterium metabolism where an existing gene cluster is enhanced to produce and enrich bioactive secondary metabolites has been studied previously. In this research, we aimed to isolate and elucidate the structure of metabolites of compounds 1 and 2 which have been analyzed previously in P. megaterium crude extract. This was achieved through a PREP-ODS C18 column with an HPLC-UV/visible detector. Then, the compounds were subjected to nuclear magnetic resonance (NMR), electrospray ionization mass spectrometry (ESI-MS), and Fourier-transform infrared spectroscopy (FT-IR) techniques. Furthermore, bioinformatics and transcriptome analysis were used to examine the gene expression for which the secondary metabolites produced in the presence of AuNPs showed significant enhancement in transcriptomic responses. The metabolites of compounds 1 and 2 were identified as daidzein and genistein, respectively. The real-time polymerase chain reaction (RT-PCR) technique was used to assess the expression of three genes ( csoR , CHS , and yjiB ) from a panel of selected genes known to be involved in the biosynthesis of the identified secondary metabolites. The expression levels of two genes ( csoR and yijB ) increased in response to AuNP intervention, whereas CHS was unaffected.
Keyphrases
- ms ms
- genome wide
- bioinformatics analysis
- magnetic resonance
- genome wide identification
- mass spectrometry
- gene expression
- gold nanoparticles
- randomized controlled trial
- poor prognosis
- dna methylation
- liquid chromatography
- genome wide analysis
- high performance liquid chromatography
- high resolution
- transcription factor
- oxidative stress
- magnetic resonance imaging
- computed tomography
- long non coding rna
- copy number
- single cell
- tandem mass spectrometry
- reduced graphene oxide
- solid phase extraction
- molecular dynamics simulations