Metagenomic and metatranscriptomic analysis of human prostate microbiota from patients with prostate cancer.
Ye FengVarune Rohan RamnarineRobert BellStanislav VolikElai DavicioniVanessa M HayesShancheng RenColin C CollinsPublished in: BMC genomics (2019)
This is the first study of the human prostate microbiome employing an integrated metagenomics and metatranscriptomics approach. In this Chinese cohort, both metagenome and metatranscriptome analyses showed a non-sterile microenvironment in the prostate of PCa patients, but we did not find links between the microbiome and local progression of PCa. However, the correlated expression of Pseudomonas genes and human small RNA genes may provide tantalizing preliminary evidence that Pseudomonas infection may impede metastasis.
Keyphrases
- prostate cancer
- endothelial cells
- induced pluripotent stem cells
- radical prostatectomy
- pluripotent stem cells
- stem cells
- end stage renal disease
- genome wide
- poor prognosis
- ejection fraction
- prognostic factors
- gene expression
- staphylococcus aureus
- peritoneal dialysis
- pseudomonas aeruginosa
- dna methylation
- patient reported outcomes