Genome-Wide Identification of SnRK1 Catalytic α Subunit and FLZ Proteins in Glycyrrhiza inflata Bat. Highlights Their Potential Roles in Licorice Growth and Abiotic Stress Responses.
Chao YangGuangyu ShiYuping LiMing LuoHongxia WangJihua WangLing YuanYing WangYongqing LiPublished in: International journal of molecular sciences (2022)
Sucrose non-fermenting-1-related protein kinase-1 (SnRK1) and its scaffolding proteins, FCS-like zinc finger proteins (FLZs), are well conserved in land plants and involved in various processes of plant growth and stress responses. Glycyrrhiza inflata Bat. is a widely used licorice species with strong abiotic stress resistance, in which terpenoids and flavonoids are the major bioactive components. Here, we identified 2 SnRK1 catalytic α subunit encoding genes ( GiSnRK1 α 1 and GiSnRK1α2 ) and 21 FLZ genes in G. inflata . Polygenetic analysis showed that the 21 GiFLZs could be divided into three groups. A total of 10 representative GiFLZ proteins interact with GiSnRK1α1, and they display overlapped subcellular localization (mainly in the nucleus and the cytoplasm) when transiently expressed in Nicotiana benthamiana leaf cells. Coinciding with the existence of various phytohormone-responsive and stress-responsive cis-regulatory elements in the GiSnRK1 α and GiFLZ gene promoters, GiFLZs are actively responsive to methyl jasmonic acid (MeJA) and abscisic acid (ABA) treatments, and several GiFLZs and GiSnRK1 α 1 are regulated by drought and saline-alkaline stresses. Interestingly, GiSnRK1 α and 20 of 21 GiFLZs (except for GiFLZ2 ) show higher expression in the roots than in the leaves. These data provide comprehensive information on the SnRK1 catalytic α subunit and the FLZ proteins in licorice for future functional characterization.
Keyphrases
- genome wide identification
- transcription factor
- protein kinase
- genome wide
- plant growth
- cancer therapy
- arabidopsis thaliana
- climate change
- induced apoptosis
- poor prognosis
- healthcare
- gene expression
- cross sectional
- risk assessment
- long non coding rna
- machine learning
- health information
- social media
- bioinformatics analysis