FastRemap: a tool for quickly remapping reads between genome assemblies.

Jeremie S Kim Can FirtinaMeryem Banu CavlakDamla Senol Cali Can Alkan Onur Mutlu

Published in: Bioinformatics (Oxford, England) (2022)

FastRemap is written in C++. Source code and user manual are freely available at: github.com/CMU-SAFARI/FastRemap. Docker image available at: https://hub.docker.com/r/alkanlab/fastremap. Also available in Bioconda at: https://anaconda.org/bioconda/fastremap-bio.

Keyphrases

deep learning
genome wide
bioinformatics analysis
gene expression
dna methylation