Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop)

Keyphrases

Publications

volume 13769, 2023

Bhakti Baheti, Sarthak Pati, Bjoern H Menze, Spyridon Bakas
Leveraging 2D Deep Learning ImageNet-trained models for Native 3D Medical Image Analysis. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 13769 (2023)

volume 12962, 2022

Siddhesh P Thakur, Sarthak Pati, Ravi Panchumarthy, Deepthi Karkada, Junwen Wu, Dmitry Kurtaev, Chiharu Sako, Prashant Shah, Spyridon Bakas
Optimization of Deep Learning Based Brain Extraction in MRI for Low Resource Environments. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 12962 (2022)

volume 2021, 2022

Qiran Jia, Hai Shu
BiTr-Unet: a CNN-Transformer Combined Network for MRI Brain Tumor Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 2021 (2022)

volume 12658, 2021

Sarthak Pati, Vaibhav Sharma, Heena Aslam, Siddhesh P Thakur, Hamed Akbari, Andreas Mang, Shashank Subramanian, George Biros, Christos Davatzikos, Spyridon Bakas
Estimating Glioblastoma Biophysical Growth Parameters Using Deep Learning Regression. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 12658 (2021)
Xiaofeng Liu, Fangxu Xing, Chao Yang, C-C Jay Kuo, Georges El Fakhri, Jonghye Woo
Symmetric-Constrained Irregular Structure Inpainting for Brain MRI Registration with Tumor Pathology. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 12658 (2021)

volume 2020, 2021

Chenggang Lyu, Hai Shu
A Two-Stage Cascade Model with Variational Autoencoders and Attention Gates for MRI Brain Tumor Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 2020 (2021)

volume 11993, 2020

Sarthak Pati, Ashish Singh, Saima Rathore, Aimilia Gastounioti, Mark Bergman, Phuc Ngo, Sung Min Ha, Dimitrios Bounias, James Minock, Grayson Murphy, Hongming Li, Amit Bhattarai, Adam Wolf, Patmaa Sridaran, Ratheesh Kalarot, Hamed Akbari, Aristeidis Sotiras, Siddhesh P Thakur, Ragini Verma, Russell T Shinohara, Paul Yushkevich, Yong Fan, Despina Kontos, Christos Davatzikos, Spyridon Bakas
The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11993 (2020)

volume 11992, 2020

Siddhesh P Thakur, Jimit Doshi, Sarthak Pati, Sung Min Ha, Chiharu Sako, Sanjay Talbar, Uday Kulkarni, Christos Davatzikos, Guray Erus, Spyridon Bakas
Skull-Stripping of Glioblastoma MRI Scans Using 3D Deep Learning. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11992 (2020)
Caleb M Grenko, Angela N Viaene, MacLean P Nasrallah, Michael D Feldman, Hamed Akbari, Spyridon Bakas
Towards Population-Based Histologic Stain Normalization of Glioblastoma. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11992 (2020)
Po-Yu Kao, Jeffereson W Chen, B S Manjunath
Predicting Clinical Outcome of Stroke Patients with Tractographic Feature. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11992 (2020)

volume 11383, 2019

Samar S M Elsheikh, Spyridon Bakas, Nicola J Mulder, Emile R Chimusa, Christos Davatzikos, Alessandro Crimi
Multi-stage Association Analysis of Glioblastoma Gene Expressions with Texture and Spatial Patterns. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11383 (2019)
Micah J Sheller, G Anthony Reina, Brandon Edwards, Jason Martin, Spyridon Bakas
Multi-Institutional Deep Learning Modeling Without Sharing Patient Data: A Feasibility Study on Brain Tumor Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11383 (2019)
Xu Han, Spyridon Bakas, Roland Kwitt, Stephen Aylward, Hamed Akbari, Michel Bilello, Christos Davatzikos, Marc Niethammer
Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 11383 (2019)

volume 10670, 2018

Matt Higger, Martha Shenton, Sylvain Bouix
Pairwise, Ordinal Outlier Detection of Traumatic Brain Injuries. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10670 (2018)
Zeina Shboul, Lasitha Vidyaratne, Mahbubul Alam, Syed M S Reza, Khan M Iftekharuddin
Glioblastoma and Survival Prediction. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10670 (2018)
Saima Rathore, Spyridon Bakas, Sarthak Pati, Hamed Akbari, Ratheesh Kalarot, Patmaa Sridharan, Martin Rozycki, Mark Bergman, Birkan Tunc, Ragini Verma, Michel Bilello, Christos Davatzikos
Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10670 (2018)
Greg M Fleishman, Alessandra Valcarcel, Dzung L Pham, Snehashis Roy, Peter A Calabresi, Paul Yushkevich, Russell T Shinohara, Ipek Oguz
Joint Intensity Fusion Image Synthesis Applied to Multiple Sclerosis Lesion Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10670 (2018)
Ipek Oguz, Aaron Carass, Dzung L Pham, Snehashis Roy, Nagesh Subbana, Peter A Calabresi, Paul A Yushkevich, Russell T Shinohara, Jerry L Prince
Dice Overlap Measures for Objects of Unknown Number: Application to Lesion Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10670 (2018)

volume 10154, 2017

Ke Zeng, Spyridon Bakas, Aristeidis Sotiras, Hamed Akbari, Martin Rozycki, Saima Rathore, Sarthak Pati, Christos Davatzikos
Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10154 (2017)
Subhranil Koley, Chandan Chakraborty, Caterina Mainero, Bruce Fischl, Iman Aganj
A Fast Approach to Automatic Detection of Brain Lesions. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop) 10154 (2017)