Functional & integrative genomics

Keyphrases

Publications

volume 24, number 4, 2024

Poulami Chatterjee, Sandipan Mukherjee, Pralay Majumder
Shaping Drosophila eggs: unveiling the roles of Arpc1 and cpb in morphogenesis. Functional & integrative genomics 24 (4) (2024)
Abhishek Ghosh, Kaomud Tyagi, Anil Kumar Dubey, Andrew D Sweet, Devkant Singha, Prathana Goswami, Vikas Kumar
Purifying selection drove the adaptation of mitochondrial genes along with correlation of gene rearrangements and evolutionary rates in two subfamilies of Whitefly (Insecta: Hemiptera). Functional & integrative genomics 24 (4) (2024)
Meng Yang, Yuhan Deng, Yu Ma, Chunli Song, Zhenhua Wu, Xiayimaierdan Yibulayin, Xiaohong Sun, Yunquan Guo, Dan He
Comprehensive pan-cancer analysis reveals that C5orf34 regulates the proliferation and mortality of lung cancer. Functional & integrative genomics 24 (4) (2024)
Narendra Kumar Sharma, Pragya Dwivedi, Ravi Bhushan, Pawan Kumar Maurya, Abhishek Kumar, Tikam Chand Dakal
Engineering circular RNA for molecular and metabolic reprogramming. Functional & integrative genomics 24 (4) (2024)
Jian-Ying Tang, Lu Yang, Qing-Jian Wu, Ying Yang, Yuan-Yuan Su, Yi-Rong Chen, Jiao Mu
Circ-IP6K2 suppresses tumor progression by modulating the miR-1292-5p/CAMK2N1 signal in clear cell renal cell carcinoma. Functional & integrative genomics 24 (4) (2024)
Tao Han, Ying Bai, Yafeng Liu, Yunjia Dong, Chao Liang, Lu Gao, Jiawei Zhou, Jianqiang Guo, Jing Wu, Dong Hu
Integrated multi-omics analysis and machine learning to refine molecular subtypes, prognosis, and immunotherapy in lung adenocarcinoma. Functional & integrative genomics 24 (4) (2024)
Hamza Sohail, Iqra Noor, Xuewen Xu, Rahat Sharif, Xuehao Chen, Xiaodong Yang
Reviving resilience: MEcPP-mediated ASK1-IMPα-9-TRP2 stress-responsive module. Functional & integrative genomics 24 (4) (2024)
Wantao Wu, Gang Peng, Kaiyue Wang, Yijian Yang, Zhikun Liu, Gelei Xiao
Single-cell analysis identified PDIA3 as regulator of malignant characteristics and macrophage function in human cancers. Functional & integrative genomics 24 (4) (2024)
Xiaofeng Yang, Cuicui Xu, Chenghao Liu, Xiangwei Wu, Xueling Chen, Jun Hou, Lianghai Wang
TGF-β1-Induced LINC01094 promotes epithelial-mesenchymal transition in hepatocellular carcinoma through the miR-122-5p/TGFBR2-SAMD2-SMAD3 Axis. Functional & integrative genomics 24 (4) (2024)
Linah Wetthasinghe, Hien Fuh Ng, Yun Fong Ngeow, Kee Seang Chew, Way Seah Lee
Navigating the intricacies of RT-qPCR data analysis in gene expression studies. Functional & integrative genomics 24 (4) (2024)
Firat Ozcelik, Mehmet Sait Dundar, A Baki Yildirim, Gary Henehan, Oscar Vicente, José A Sánchez-Alcázar, Nuriye Gokce, Duygu T Yildirim, Nurdeniz Nalbant Bingol, Dijana Plaseska Karanfilska, Matteo Bertelli, Lejla Pojskic, Mehmet Ercan, Miklos Kellermayer, Izem Olcay Sahin, Ole K Greiner-Tollersrud, Busra Tan, Donald Martin, Robert Marks, Satya Prakash, Mustafa Yakubi, Tommaso Beccari, Ratnesh Lal, Sehime G Temel, Isabelle Fournier, M Cerkez Ergoren, Adam Mechler, Michel Salzet, Michele Maffia, Dancho Danalev, Qun Sun, Lembit Nei, Daumantas Matulis, Dana Tapaloaga, Andres Janecke, James Bown, Karla Santa Cruz, Iza Radecka, Celal Ozturk, Ozkan Ufuk Nalbantoglu, Sebnem Ozemri Sag, Kisung Ko, Reynir Arngrimsson, Isabel Belo, Hilal Akalin, Munis Dundar
The impact and future of artificial intelligence in medical genetics and molecular medicine: an ongoing revolution. Functional & integrative genomics 24 (4) (2024)
Zi-Qian Liang, Wei Zhang, Da-Tong Zeng, Jun-Hong Chen, Jia-Yuan Luo, Lin Shi, Kang-Lai Wei, Gang Chen
Upregulation of hsa-miR-141-3p promotes uterine cervical carcinoma progression via targeting dual-specificity protein phosphatase 1. Functional & integrative genomics 24 (4) (2024)
Min Kong, Zhiheng Chen, Zhiqiang Lin, Ping Yin, Qin Zhao
SIGMAR1 targets AMPK/ULK1 pathway to inhibit SH-SY5Y cell apoptosis by regulating endoplasmic reticulum stress and autophagy. Functional & integrative genomics 24 (4) (2024)
Xiaofeng Yang, Cuicui Xu, Chenghao Liu, Xiangwei Wu, Xueling Chen, Jun Hou, Lianghai Wang
TGF-β1-Induced LINC01094 promotes epithelial-mesenchymal transition in hepatocellular carcinoma through the miR-122-5p/TGFBR2-SAMD2-SMAD3 Axis. Functional & integrative genomics 24 (4) (2024)

volume 24, number 5, 2024

Mahdi Rafiyian, Russel J Reiter, Sayyed Mehdi Rasooli Manesh, Reza Asemi, Mehran Sharifi, Sotoudeh Mohammadi, Mohammad Ali Mansournia, Zatollah Asemi
Programmed cell death and melatonin: A comprehensive review. Functional & integrative genomics 24 (5) (2024)
S Daisy Precilla, Indrani Biswas, T S Anitha, B Agieshkumar
Microproteins unveiling new dimensions in cancer. Functional & integrative genomics 24 (5) (2024)
Kashif Shahzad, Meng Zhang, Iqra Mubeen, Xuexian Zhang, Liping Guo, Tingxiang Qi, Juanjuan Feng, Huini Tang, Xiuqin Qiao, Jianyong Wu, Chaozhu Xing
Integrative analyses of long and short-read RNA sequencing reveal the spliced isoform regulatory network of seedling growth dynamics in upland cotton. Functional & integrative genomics 24 (5) (2024)
Nazish Akhtar, Mo Shadab, Nourien Bhatti, Moh Sajid Ansarì, M B Siddiqui
Biotechnological frontiers in harnessing allelopathy for sustainable crop production. Functional & integrative genomics 24 (5) (2024)
Wanjin Chen, Ming Tan, Hui Zhang, Tingting Gao, Jihua Ren, Shengtao Cheng, Juan Chen
Signaling molecules in the microenvironment of hepatocellular carcinoma. Functional & integrative genomics 24 (5) (2024)
Fatemeh Ebadi Meinag, Mina Fatahi, Vahid Vahedian, Nazila Fathi Maroufi, Bashir Mosayyebi, Elham Ahmadi, Mohammad Rahmati
Modulatory effects of miRNAs in doxorubicin resistance: A mechanistic view. Functional & integrative genomics 24 (5) (2024)
Yu Fan, Po Wang, Changchun Jiang, Jinyu Chen, Meili Zhao, Jiahui Liu
Tet1-mediated activation of the Ampk signaling by Trpv1 DNA hydroxymethylation exerts neuroprotective effects in a rat model of Parkinson's disease. Functional & integrative genomics 24 (5) (2024)
Hong-Leong Cheah, Marimuthu Citartan, Li-Pin Lee, Siti Aminah Ahmed, Mohd Zaki Salleh, Lay Kek Teh, Thean-Hock Tang
Exploring the transcription start sites and other genomic features facilitates the accurate identification and annotation of small RNAs across multiple stress conditions in Mycobacterium tuberculosis. Functional & integrative genomics 24 (5) (2024)
Rushikesh Sanjay Mane, Bishun Deo Prasad, Sangita Sahni, Zeba Quaiyum, V K Sharma
Biotechnological studies towards improvement of finger millet using multi-omics approaches. Functional & integrative genomics 24 (5) (2024)
Saikat Mazumder, Debasmita Bhattacharya, Dibyajit Lahiri, Moupriya Nag
Milletomics: a metabolomics centered integrated omics approach toward genetic progression. Functional & integrative genomics 24 (5) (2024)
Manoj Kumar Gupta, Gayatri Gouda, Ramakrishna Vadde
Deciphering the role of FOXP4 in long COVID: exploring genetic associations, evolutionary conservation, and drug identification through bioinformatics analysis. Functional & integrative genomics 24 (5) (2024)
Max Roberto Batista de Araújo, Fernanda Diniz Prates, Juliana Nunes Ramos, Eduarda Guimarães Sousa, Sérgio Bokermann, Cláudio Tavares Sacchi, Ana Luíza Mattos-Guaraldi, Karoline Rodrigues Campos, Mireille Ângela Bernardes Sousa, Verônica Viana Vieira, Marlon Benedito Nascimento Santos, Carlos Henrique Camargo, Lincoln de Oliveira Sant'Anna, Louisy Sanches Dos Santos, Vasco Ariston de Carvalho Azevedo
Infection by a multidrug-resistant Corynebacterium diphtheriae strain: prediction of virulence factors, CRISPR-Cas system analysis, and structural implications of mutations conferring rifampin resistance. Functional & integrative genomics 24 (5) (2024)
Xiaoxiao Wei, Zhangfu Li, Heng Zheng, Xiaolian Li, Yuntao Lin, Hongyu Yang, Yuehong Shen
Long non-coding RNA MAGEA4-AS1 binding to p53 enhances MK2 signaling pathway and promotes the proliferation and metastasis of oral squamous cell carcinoma. Functional & integrative genomics 24 (5) (2024)
Kasmika Borah, Himanish Shekhar Das, Soumita Seth, Koushik Mallick, Zubair Rahaman, Saurav Mallik
A review on advancements in feature selection and feature extraction for high-dimensional NGS data analysis. Functional & integrative genomics 24 (5) (2024)
Max Roberto Batista de Araújo, Fernanda Diniz Prates, Juliana Nunes Ramos, Eduarda Guimarães Sousa, Sérgio Bokermann, Cláudio Tavares Sacchi, Ana Luíza Mattos-Guaraldi, Karoline Rodrigues Campos, Mireille Ângela Bernardes Sousa, Verônica Viana Vieira, Marlon Benedito Nascimento Santos, Carlos Henrique Camargo, Lincoln de Oliveira Sant'Anna, Louisy Sanches Dos Santos, Vasco Ariston de Carvalho Azevedo
Infection by a multidrug-resistant Corynebacterium diphtheriae strain: prediction of virulence factors, CRISPR-Cas system analysis, and structural implications of mutations conferring rifampin resistance. Functional & integrative genomics 24 (5) (2024)
Shuangjia Wang, Hao Yu, Ping Guo, Liuxing Feng, Zhimin Li
C-FOS inhibition promotes pancreatic cancer cell ferroptosis by transcriptionally regulating the expression of SLC7A11. Functional & integrative genomics 24 (5) (2024)
Jeevitha Rajanathadurai, Elumalai Perumal, Jospin Sindya
Advances in targeting cancer epigenetics using CRISPR-dCas9 technology: A comprehensive review and future prospects. Functional & integrative genomics 24 (5) (2024)
Wenjing Yong, Yu Jian, Qi Wang, Kuilin Fei, Ping Li
AC092100.1 promotes angiogenesis in pre-eclampsia through YTHDC2/VEGFA signaling. Functional & integrative genomics 24 (5) (2024)
Ed Cha, Sung Ho Hong, Taj Rai, Vy La, Pranav Madabhushi, Darren Teramoto, Cameron Fung, Pauline Cheng, Yu Chen, Angelo Keklikian, Jeffrey Liu, William Fang, Finosh G Thankam
Ischemic cardiac stromal fibroblast-derived protein mediators in the infarcted myocardium and transcriptomic profiling at single cell resolution. Functional & integrative genomics 24 (5) (2024)
Wantao Wu, Gang Peng, Kaiyue Wang, Yijian Yang, Zhikun Liu, Gelei Xiao
Correction to: Single‑cell analysis identified PDIA3 as regulator of malignant characteristics and macrophage function in human cancers. Functional & integrative genomics 24 (5) (2024)
Fatemeh Ebadi Meinag, Mina Fatahi, Vahid Vahedian, Nazila Fathi Maroufi, Bashir Mosayyebi, Elham Ahmadi, Mohammad Rahmati
Modulatory effects of miRNAs in doxorubicin resistance: A mechanistic view. Functional & integrative genomics 24 (5) (2024)
Jingang Zhao, Yangyang Ma, Xiaodong Zheng, Zhen Sun, Hongxiang Lin, Chuanjun Du, Jing Cao
Bladder cancer: non-coding RNAs and exosomal non-coding RNAs. Functional & integrative genomics 24 (5) (2024)
Sarah Soliman, Salah Abdalla, Amal Zedan, Shymaa Enany
Genomic profiling of pan-drug resistant proteus mirabilis Isolates reveals antimicrobial resistance and virulence gene landscape. Functional & integrative genomics 24 (5) (2024)
Max Roberto Batista de Araújo, Fernanda Diniz Prates, Juliana Nunes Ramos, Eduarda Guimarães Sousa, Sérgio Bokermann, Cláudio Tavares Sacchi, Ana Luíza Mattos-Guaraldi, Karoline Rodrigues Campos, Mireille Ângela Bernardes Sousa, Verônica Viana Vieira, Marlon Benedito Nascimento Santos, Carlos Henrique Camargo, Lincoln de Oliveira Sant'Anna, Louisy Sanches Dos Santos, Vasco Ariston de Carvalho Azevedo
Infection by a multidrug-resistant Corynebacterium diphtheriae strain: prediction of virulence factors, CRISPR-Cas system analysis, and structural implications of mutations conferring rifampin resistance. Functional & integrative genomics 24 (5) (2024)
Qiqolei Yuan, Nengyuan Lv, Qianying Chen, Siyi Shen, Yahui Wang, Jinyi Tong
Application of single cell sequencing technology in ovarian cancer research (review). Functional & integrative genomics 24 (5) (2024)
Hengrui Liu, Jieling Weng, Christopher L-H Huang, Antony P Jackson
Is the voltage-gated sodium channel β3 subunit (SCN3B) a biomarker for glioma? Functional & integrative genomics 24 (5) (2024)
Akmal Zubair, Bushra Bibi, Faiza Habib, Arooba Sujan, Muhammad Ali
Clinical trials and recent progress in HIV vaccine development. Functional & integrative genomics 24 (5) (2024)
Pradnya Kamble, Prinsa R Nagar, Kaushikkumar A Bhakhar, Prabha Garg, M Elizabeth Sobhia, Srivatsava Naidu, Prasad V Bharatam
Cancer pharmacoinformatics: Databases and analytical tools. Functional & integrative genomics 24 (5) (2024)
Shanshan Zhao, Chen Song, Fengxi Chen, Man Li
LncRNA XIST/miR-455-3p/HOXC4 axis promotes breast cancer development by activating TGF-β/SMAD signaling pathway. Functional & integrative genomics 24 (5) (2024)
Sina Taghvimi, Elahe Soltani Fard, Seyyed Hossein Khatami, Sara Zafaranchi Z M, Mortaza Taheri-Anganeh, Ahmad Movahedpour, Hassan Ghasemi
lncRNA HOTAIR and Cardiovascular diseases. Functional & integrative genomics 24 (5) (2024)
Xiao Tian, Yun Zhang, MiaoMiao Peng, YuXi Hou
Regulatory axis of circular RNA DTNB, microRNA-485-5p, and myeloid cell leukemia 1 attenuates inflammation and apoptosis in caerulein-treated AR42J cells. Functional & integrative genomics 24 (5) (2024)
Tam Thi Thanh Tran, Liem Huu Minh Le, Trang Thi Nguyen, Thanh Chi Nguyen, Trang Thi Huyen Hoang, Phat Tien Do, Huong Thi Mai To
QTL-seq identifies genomic region associated with the crown root development under Jasmonic acid response. Functional & integrative genomics 24 (5) (2024)
Muhammad Khuram Razzaq, Muhammad Naveed Babur, Muhammad Jawad Akbar Awan, Ghulam Raza, Mehwish Mobeen, Ali Aslam, Kadambot H M Siddique
Revolutionizing soybean genomics: How CRISPR and advanced sequencing are unlocking new potential. Functional & integrative genomics 24 (5) (2024)
Qiqolei Yuan, Nengyuan Lv, Qianying Chen, Siyi Shen, Yahui Wang, Jinyi Tong
Application of single cell sequencing technology in ovarian cancer research (review). Functional & integrative genomics 24 (5) (2024)
Qiqolei Yuan, Nengyuan Lv, Qianying Chen, Siyi Shen, Yahui Wang, Jinyi Tong
Application of single cell sequencing technology in ovarian cancer research (review). Functional & integrative genomics 24 (5) (2024)
Ali Tevfik Uncu, Aysenur Soyturk Patat, Ayse Ozgur Uncu
Whole-genome sequencing and identification of antimicrobial peptide coding genes in parsley (Petroselinum crispum), an important culinary and medicinal Apiaceae species. Functional & integrative genomics 24 (5) (2024)