Evolutionary applications

Keyphrases

Publications

volume 16, number 5, 2023

Ramona E Irimia, Daniel Montesinos, Anurag Chaturvedi, Ian Sanders, José L Hierro, Gastón Sotes, Lohengrin A Cavieres, Özkan Eren, Christopher J Lortie, Kristine French, Adrian Christopher Brennan
Trait evolution during a rapid global weed invasion despite little genetic differentiation. Evolutionary applications 16 (5) (2023)
Chloé Haberkorn, Jean-Philippe David, Hélène Henri, Jean-Marie Delpuech, Romain Lasseur, Fabrice Vavre, Julien Varaldi
A major 6 Mb superlocus is involved in pyrethroid resistance in the common bed bug Cimex lectularius . Evolutionary applications 16 (5) (2023)
Lu-Wen Zhang, Jun-Qiong Chen, Ru-Meng Zhao, Jun Zhong, Long-Hui Lin, Hong Li, Xiang Ji, Yan-Fu Qu
Genomic insights into local adaptation in the Asiatic toad Bufo gargarizans , and its genomic offset to climate warming. Evolutionary applications 16 (5) (2023)
Baohua Chen, Zhixiong Zhou, Yue Shi, Jie Gong, Chengyu Li, Tao Zhou, Yun Li, Dianchang Zhang, Peng Xu
Genome-wide evolutionary signatures of climate adaptation in spotted sea bass inhabiting different latitudinal regions. Evolutionary applications 16 (5) (2023)
Carolyne Houle, Philippine Gossieaux, Louis Bernatchez, Céline Audet, Dany Garant
Transgenerational effects on body size and survival in Brook charr ( Salvelinus fontinalis ). Evolutionary applications 16 (5) (2023)

volume 16, number 6, 2023

James F Fleming, Alberto Valero-Gracia, Torsten H Struck
Identifying and addressing methodological incongruence in phylogenomics: A review. Evolutionary applications 16 (6) (2023)
Muhammad Arsalan Iqbal, Frieder Hadlich, Henry Reyer, Michael Oster, Nares Trakooljul, Eduard Murani, Alvaro Perdomo-Sabogal, Klaus Wimmers, Siriluck Ponsuksili
RNA-Seq-based discovery of genetic variants and allele-specific expression of two layer lines and broiler chicken. Evolutionary applications 16 (6) (2023)
James F Fleming, Alberto Valero-Gracia, Torsten H Struck
Identifying and addressing methodological incongruence in phylogenomics: A review. Evolutionary applications 16 (6) (2023)
Louis Blois, Marina de Miguel, Pierre-François Bert, Nabil Girollet, Nathalie Ollat, Bernadette Rubio, Vincent Segura, Kai P Voss-Fels, Joachim Schmid, Elisa Marguerit
Genetic structure and first genome-wide insights into the adaptation of a wild relative of grapevine, Vitis berlandieri . Evolutionary applications 16 (6) (2023)
Angela P Fuentes-Pardo, Edward D Farrell, Mats E Pettersson, C Grace Sprehn, Leif Andersson
The genomic basis and environmental correlates of local adaptation in the Atlantic horse mackerel ( Trachurus trachurus ). Evolutionary applications 16 (6) (2023)
Muhammad Arsalan Iqbal, Frieder Hadlich, Henry Reyer, Michael Oster, Nares Trakooljul, Eduard Murani, Alvaro Perdomo-Sabogal, Klaus Wimmers, Siriluck Ponsuksili
RNA-Seq-based discovery of genetic variants and allele-specific expression of two layer lines and broiler chicken. Evolutionary applications 16 (6) (2023)
Miguel Baltazar-Soares, John Robert Britton, Adrian Pinder, Andrew J Harrison, Andrew D Nunn, Bernardo R Quintella, Catarina S Mateus, Jonathan D Bolland, Jamie R Dodd, Pedro R Almeida, Victoria Dominguez Almela, Demetra Andreou
Seascape genomics reveals limited dispersal and suggests spatially varying selection among European populations of sea lamprey ( Petromyzon marinus ). Evolutionary applications 16 (6) (2023)
Agustin Barria, Carolina Peñaloza, Athina Papadopoulou, Mahirah Mahmuddin, Andrea Doeschl-Wilson, John A H Benzie, Ross D Houston, Pamela Wiener
Genetic differentiation following recent domestication events: A study of farmed Nile tilapia ( Oreochromis niloticus ) populations. Evolutionary applications 16 (6) (2023)
Miguel Baltazar-Soares, John Robert Britton, Adrian Pinder, Andrew J Harrison, Andrew D Nunn, Bernardo R Quintella, Catarina S Mateus, Jonathan D Bolland, Jamie R Dodd, Pedro R Almeida, Victoria Dominguez Almela, Demetra Andreou
Seascape genomics reveals limited dispersal and suggests spatially varying selection among European populations of sea lamprey ( Petromyzon marinus ). Evolutionary applications 16 (6) (2023)
Farida Samad-Zada, Evan P Kelemen, Sandra M Rehan
The impact of geography and climate on the population structure and local adaptation in a wild bee. Evolutionary applications 16 (6) (2023)
Louis Blois, Marina de Miguel, Pierre-François Bert, Nabil Girollet, Nathalie Ollat, Bernadette Rubio, Vincent Segura, Kai P Voss-Fels, Joachim Schmid, Elisa Marguerit
Genetic structure and first genome-wide insights into the adaptation of a wild relative of grapevine, Vitis berlandieri . Evolutionary applications 16 (6) (2023)
Matthew A Campbell, Matthew C Hale, Chase S Jalbert, Kristine Dunker, Adam J Sepulveda, J Andrés López, Jeffrey A Falke, Peter A H Westley
Genomics reveal the origins and current structure of a genetically depauperate freshwater species in its introduced Alaskan range. Evolutionary applications 16 (6) (2023)
Agustin Barria, Carolina Peñaloza, Athina Papadopoulou, Mahirah Mahmuddin, Andrea Doeschl-Wilson, John A H Benzie, Ross D Houston, Pamela Wiener
Genetic differentiation following recent domestication events: A study of farmed Nile tilapia ( Oreochromis niloticus ) populations. Evolutionary applications 16 (6) (2023)
Matthew A Campbell, Matthew C Hale, Chase S Jalbert, Kristine Dunker, Adam J Sepulveda, J Andrés López, Jeffrey A Falke, Peter A H Westley
Genomics reveal the origins and current structure of a genetically depauperate freshwater species in its introduced Alaskan range. Evolutionary applications 16 (6) (2023)
Roxane Lassis, Marco Festa-Bianchet, Joanie Van de Walle, Fanie Pelletier
Genetic rescue from protected areas is modulated by migration, hunting rate, and timing of harvest. Evolutionary applications 16 (6) (2023)
Farida Samad-Zada, Evan P Kelemen, Sandra M Rehan
The impact of geography and climate on the population structure and local adaptation in a wild bee. Evolutionary applications 16 (6) (2023)
Angela P Fuentes-Pardo, Edward D Farrell, Mats E Pettersson, C Grace Sprehn, Leif Andersson
The genomic basis and environmental correlates of local adaptation in the Atlantic horse mackerel ( Trachurus trachurus ). Evolutionary applications 16 (6) (2023)
Roxane Lassis, Marco Festa-Bianchet, Joanie Van de Walle, Fanie Pelletier
Genetic rescue from protected areas is modulated by migration, hunting rate, and timing of harvest. Evolutionary applications 16 (6) (2023)

volume 16, number 7, 2023

Claire E Schraidt, Amanda S Ackiss, Wesley A Larson, Mark D Rowe, Tomas O Höök, Mark Redpath Christie
Dispersive currents explain patterns of population connectivity in an ecologically and economically important fish. Evolutionary applications 16 (7) (2023)
Rodrigo K Hamede, Nicholas M Fountain-Jones, Fernando Arce, Menna Jones, Andrew Storfer, Paul A Hohenlohe, Hamish McCallum, Benjamin Roche, Beata Ujvari, Frederic Thomas
The tumour is in the detail: Local phylogenetic, population and epidemiological dynamics of a transmissible cancer in Tasmanian devils. Evolutionary applications 16 (7) (2023)
Cecilia Helmerson, Peggy Weist, Marine Servane Ono Brieuc, Marius F Maurstad, Franziska Maria Schade, Jan Dierking, Christoph Petereit, Halvor Knutsen, Julian Metcalfe, David A Righton, Carl André, Uwe Krumme, Sissel Jentoft, Reinhold Hanel
Evidence of hybridization between genetically distinct Baltic cod stocks during peak population abundance(s). Evolutionary applications 16 (7) (2023)
Luke Lear, Elze Hesse, Laura Newsome, William Gaze, Angus Buckling, Michiel Vos
The effect of metal remediation on the virulence and antimicrobial resistance of the opportunistic pathogen Pseudomonas aeruginosa . Evolutionary applications 16 (7) (2023)
Sneha Suresh, Alice Mirasole, Timothy Ravasi, Salvatrice Vizzini, Celia Schunter
Brain transcriptome of gobies inhabiting natural CO 2 seeps reveal acclimation strategies to long-term acidification. Evolutionary applications 16 (7) (2023)
Alexander Blake, Dustin J Marshall
Copepod life history evolution under high- and low-food regimes. Evolutionary applications 16 (7) (2023)
Karoline Hasti Rutle, Rasmus Skern-Mauritzen, Frank Nilsen, Alejandro Mateos-Rivera, Anne Grete Sørvik Eide, Eeva Jansson, Maria Quintela, Francois Besnier, Fernando Allyon, Helene Børretzen Fjørtoft, Kevin Alan Glover
Aquaculture-driven evolution of the salmon louse mtDNA genome. Evolutionary applications 16 (7) (2023)
Alesandro Souza Santos, Eliana Cazetta, Deborah Faria, Thâmara Moura Lima, Maria Teresa Gomes Lopes, Carolina da Silva Carvalho, Alessandro Alves Pereira, José Carlos Morante-Filho, Fernanda Amato Gaiotto
Tropical forest loss and geographic location drive the functional genomic diversity of an endangered palm tree. Evolutionary applications 16 (7) (2023)
Jean-Pascal Capp, Frederic Thomas, Andriy Marusyk, Antoine M Dujon, Sophie Tissot, Robert A Gatenby, Benjamin Roche, Beata Ujvari, James DeGregori, Joel S Brown, Aurora M Nedelcu
The paradox of cooperation among selfish cancer cells. Evolutionary applications 16 (7) (2023)
Noelia Pérez-Pereira, Humberto Quesada, Armando Caballero
An empirical evaluation of the estimation of inbreeding depression from molecular markers under suboptimal conditions. Evolutionary applications 16 (7) (2023)

volume 16, number 8, 2023

Ewen Crequer, Jeanne Ropars, Jean-Luc Jany, Thibault Caron, Monika Coton, Alodie Snirc, Jean-Philippe Vernadet, Antoine Branca, Tatiana Giraud, Emmanuel Coton
A new cheese population in Penicillium roqueforti and adaptation of the five populations to their ecological niche. Evolutionary applications 16 (8) (2023)
Ann J Ropp, Kimberly S Reece, Richard A Snyder, Jingwei Song, Ellen E Biesack, Jan R McDowell
Fine-scale population structure of the northern hard clam ( Mercenaria mercenaria ) revealed by genome-wide SNP markers. Evolutionary applications 16 (8) (2023)
Laure Olazcuaga, Beatrice Lincke, Sarah DeLacey, Lily F Durkee, Brett A Melbourne, Ruth A Hufbauer
Population demographic history and evolutionary rescue: Influence of a bottleneck event. Evolutionary applications 16 (8) (2023)
Madilyn M Gamble, Ryan G Calsbeek
Sex-specific heritabilities for length at maturity among Pacific salmonids and their consequences for evolution in response to artificial selection. Evolutionary applications 16 (8) (2023)
Gemma Palomar, Guillaume Wos, Robby Stoks, Szymon Sniegula
Latitude-specific urbanization effects on life history traits in the damselfly Ischnura elegans . Evolutionary applications 16 (8) (2023)
Benjamin Mayne, Oliver Berry, Simon Jarman
Calibrating epigenetic clocks with training data error. Evolutionary applications 16 (8) (2023)
Tyler H Lantiegne, Craig F Purchase
Can cryptic female choice prevent invasive hybridization in external fertilizing fish? Evolutionary applications 16 (8) (2023)
Erika M King, Megan V McPhee, Scott C Vulstek, Curry J Cunningham, Joshua R Russell, David A Tallmon
Alternative life-history strategy contributions to effective population size in a naturally spawning salmon population. Evolutionary applications 16 (8) (2023)
Andy Boëns, Bruno Ernande, Pierre Petitgas, Christophe Lebigre
Different mechanisms underpin the decline in growth of anchovies and sardines of the Bay of Biscay. Evolutionary applications 16 (8) (2023)

volume 16, number 9, 2023

Ying-Chu Lo, Jade Bruxaux, Ricardo C Rodríguez de la Vega, Samuel O'Donnell, Alodie Snirc, Monika Coton, Mélanie Le Piver, Stéphanie Le Prieur, Daniel Roueyre, Joëlle Dupont, Jos Houbraken, Robert Debuchy, Jeanne Ropars, Tatiana Giraud, Antoine Branca
Domestication in dry-cured meat Penicillium fungi: Convergent specific phenotypes and horizontal gene transfers without strong genetic subdivision. Evolutionary applications 16 (9) (2023)
Barbara L Langille, Tony Kess, Matthew Brachmann, Cameron M Nugent, Amber Messmer, Steven J Duffy, Melissa K Holborn, Mallory Van Wyngaarden, Tim Martin Knutsen, Matthew Kent, Danny Boyce, Robert S Gregory, Johanne Gauthier, Elizabeth A Fairchild, Michael Pietrak, Stephen Eddy, Carlos Garcia de Leaniz, Sofia Consuegra, Ben Whittaker, Paul Bentzen, Ian R Bradbury
Fine-scale environmentally associated spatial structure of lumpfish ( Cyclopterus lumpus ) across the Northwest Atlantic. Evolutionary applications 16 (9) (2023)
Carlos Congrains, Julian R Dupuis, Erick J Rodriguez, Allen L Norrbom, Gary Steck, Bruce Sutton, Norma Nolazco, Reinaldo A de Brito, Scott M Geib
Phylogenomic analysis provides diagnostic tools for the identification of Anastrepha fraterculus (Diptera: Tephritidae) species complex. Evolutionary applications 16 (9) (2023)
Xianliang Zhu, Rong Zou, Huizhen Qin, Shengfeng Chai, Jianmin Tang, Yingying Li, Xiao Wei
Genome-wide diversity evaluation and core germplasm extraction in ex situ conservation: A case of golden Camellia tunghinensis . Evolutionary applications 16 (9) (2023)
Hamish A Burnett, Vanessa C Bieker, Mathilde Le Moullec, Bart Peeters, Jørgen Rosvold, Åshild Ønvik Pedersen, Love Dalen, Leif Egil Loe, Henrik Jensen, Brage Bremset Hansen, Michael D Martin
Contrasting genomic consequences of anthropogenic reintroduction and natural recolonization in high-arctic wild reindeer. Evolutionary applications 16 (9) (2023)
Sarah Jean Lehnert, Ian R Bradbury, Brendan F Wringe, Mallory Van Wyngaarden, Paul Bentzen
Multifaceted framework for defining conservation units: An example from Atlantic salmon ( Salmo salar ) in Canada. Evolutionary applications 16 (9) (2023)
Chiara Pedrazzini, Hermann Strasser, Niklaus Zemp, Rolf Holderegger, Franco Widmer, Jürg Enkerli
Spatial and temporal patterns in the population genomics of the European cockchafer Melolontha melolontha in the Alpine region. Evolutionary applications 16 (9) (2023)
Hugo J Scharfenstein, Carlos Alvarez-Roa, Lesa M Peplow, Patrick Buerger, Wing Yan Chan, Madeleine J H van Oppen
Chemical mutagenesis and thermal selection of coral photosymbionts induce adaptation to heat stress with trait trade-offs. Evolutionary applications 16 (9) (2023)