Amanda R Stahlke (A R Stahlke)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 15

Top Topics

Top Venues

Genome biology and evolution

G3 (Bethesda, Md.)

Evolutionary applications

Molecular ecology

This page only lists publications with an associated author ORCID identifier.

Publications

David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
Jennifer Chang, Amanda R Stahlke, Sivanandan Chudalayandi, Benjamin D Rosen, Anna K Childers, Andrew J Severin
"polishCLR: a Nextflow workflow for polishing PacBio CLR genome assemblies". Genome biology and evolution (2023)
Jennifer Chang, Amanda R Stahlke, Sivanandan Chudalayandi, Benjamin D Rosen, Anna K Childers, Andrew J Severin
polishCLR: A Nextflow Workflow for Polishing PacBio CLR Genome Assemblies. Genome biology and evolution 15 (3) (2023)
Jennifer Chang, Amanda R Stahlke, Sivanandan Chudalayandi, Benjamin D Rosen, Anna K Childers, Andrew J Severin
polishCLR: A Nextflow Workflow for Polishing PacBio CLR Genome Assemblies. Genome biology and evolution 15 (3) (2023)
Eliza I Clark, Ellyn V Bitume, Dan W Bean, Amanda R Stahlke, Paul A Hohenlohe, Ruth A Hufbauer
Evolution of reproductive life-history and dispersal traits during the range expansion of a biological control agent. Evolutionary applications 15 (12) (2022)
Zachary P Cohen, Lindsey C Perkin, Sheina B Sim, Amanda R Stahlke, Scott M Geib, Anna K Childers, Timothy P L Smith, Charles Suh
Insight into weevil biology from a reference quality genome of the boll weevil, Anthonomus grandis grandis Boheman (Coleoptera: Curculionidae). G3 (Bethesda, Md.) (2022)
George P Tiley, Tobias van Elst, Helena Teixeira, Dominik Schüßler, Jordi Salmona, Marina B Blanco, José M Ralison, Blanchard Randrianambinina, Rodin M Rasoloarison, Amanda R Stahlke, Paul A Hohenlohe, Lounès Chikhi, Edward E Louis, Ute Radespiel, Anne D Yoder
Population genomic structure in Goodman's mouse lemur reveals long-standing separation of Madagascar's Central Highlands and eastern rainforests. Molecular ecology 31 (19) (2022)
Eliza I Clark, Ellyn V Bitume, Dan W Bean, Amanda R Stahlke, Paul A Hohenlohe, Ruth A Hufbauer
Evolution of reproductive life-history and dispersal traits during the range expansion of a biological control agent. Evolutionary applications 15 (12) (2022)
Amanda R Stahlke, Jennifer Chang, Luke R Tembrock, Sheina B Sim, Sivanandan Chudalayandi, Scott M Geib, Brian E Scheffler, Omaththage P Perera, Todd M Gilligan, Anna K Childers, Kevin J Hackett, Brad Steven Coates
A chromosome-scale genome assembly of a Helicoverpa zea strain resistant to Bacillus thuringiensis Cry1Ac insecticidal protein. Genome biology and evolution (2022)
Amanda R Stahlke, Ellyn V Bitume, Zeynep A Özsoy, Dan W Bean, Anne Veillet, Meaghan I Clark, Eliza I Clark, Patrick Moran, Ruth A Hufbauer, Paul A Hohenlohe
Hybridization and range expansion in tamarisk beetles ( Diorhabda spp.) introduced to North America for classical biological control. Evolutionary applications 15 (1) (2021)
Christopher P Kozakiewicz, Lauren Ricci, Austin H Patton, Amanda R Stahlke, Sarah A Hendricks, Mark J Margres, Manuel Ruiz-Aravena, David G Hamilton, Rodrigo Hamede, Hamish McCallum, Menna E Jones, Paul A Hohenlohe, Andrew Storfer
Comparative landscape genetics reveals differential effects of environment on host and pathogen genetic structure in Tasmanian devils (Sarcophilus harrisii) and their transmissible tumour. Molecular ecology 29 (17) (2020)
Amanda R Stahlke, A Z Ozsoy, D W Bean, P A Hohenlohe
Mitochondrial Genome Sequences of Diorhabda carinata and Diorhabda carinulata, Two Beetle Species Introduced to North America for Biological Control. Microbiology resource announcements 8 (35) (2019)
Andrew Storfer, Paul A Hohenlohe, Mark J Margres, Austin H Patton, Alexandra K Fraik, Matthew Lawrance, Lauren E Ricci, Amanda R Stahlke, Hamish I McCallum, Menna E Jones
The devil is in the details: Genomics of transmissible cancers in Tasmanian devils. PLoS pathogens 14 (8) (2018)