Scott M Geib (S M Geib, Scott Geib)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 33

Top Venues

G3 (Bethesda, Md.)

Briefings in bioinformatics

Molecular ecology

Molecular ecology resources

USDA Agricultural Research Service

Pennsylvania State University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

USDA Agricultural Research Service Apr 01 2010

United States

Research Entomologist :: Tropical Crop Commodity Protection Research Unit

Education History

Pennsylvania State University - Aug 01 2008

United States

PHD :: Entomology

Publications

David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
Kelsey A Coffman, Angela N Kauwe, N E Gillette, Gaelen R Burke, Scott M Geib
Host range of a parasitoid wasp is linked to host susceptibility to its mutualistic viral symbiont. Molecular ecology (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Kelsey A Coffman, Angela N Kauwe, N E Gillette, Gaelen R Burke, Scott M Geib
Host range of a parasitoid wasp is linked to host susceptibility to its mutualistic viral symbiont. Molecular ecology 33 (17) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
Sheina B Sim, Carlos Congrains, Sandra M Velasco-Cuervo, Renee L Corpuz, Angela N Kauwe, Brian E Scheffler, Scott M Geib
Genome report: chromosome-scale genome assembly of the West Indian fruit fly Anastrepha obliqua (Diptera: Tephritidae). G3 (Bethesda, Md.) 14 (4) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Sheina B Sim, Carlos Congrains, Sandra M Velasco-Cuervo, Renee L Corpuz, Angela N Kauwe, Brian E Scheffler, Scott M Geib
Genome report: chromosome-scale genome assembly of the West Indian fruit fly Anastrepha obliqua (Diptera: Tephritidae). G3 (Bethesda, Md.) 14 (4) (2024)
Sheina B Sim, Carlos Congrains, Sandra M Velasco-Cuervo, Renee L Corpuz, Angela N Kauwe, Brian E Scheffler, Scott M Geib
Genome report: chromosome-scale genome assembly of the West Indian fruit fly Anastrepha obliqua (Diptera: Tephritidae). G3 (Bethesda, Md.) 14 (4) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
FAIR Header Reference genome: a TRUSTworthy standard. Briefings in bioinformatics 25 (3) (2024)
Adam Wright, Mark D Wilkinson, Christopher John Mungall, Scott Cain, Stephen Richards, Paul W Sternberg, Ellen Provin, Jonathan L Jacobs, Scott M Geib, Daniela Raciti, Karen Yook, Lincoln D Stein, David C Molik
DATA RESOURCES AND ANALYSES FAIR Header Reference genome: A TRUSTworthy standard. bioRxiv : the preprint server for biology (2023)
Carlos Congrains, Julian R Dupuis, Erick J Rodriguez, Allen L Norrbom, Gary Steck, Bruce Sutton, Norma Nolazco, Reinaldo A de Brito, Scott M Geib
Phylogenomic analysis provides diagnostic tools for the identification of Anastrepha fraterculus (Diptera: Tephritidae) species complex. Evolutionary applications 16 (9) (2023)
Qiang Huang, Sheina B Sim, Scott M Geib, Anna Childers, Junfeng Liu, Xiuxiu Wei, Wensu Han, Francisco Posada-Florez, Allen Z Xue, Zheng Li, Jay D Evans
Identification of sex chromosomes and primary sex ratio in the small hive beetle, a worldwide parasite of honey bees. GigaScience 12 (2023)
Oksana V Vernygora, Carlos Congrains, Scott M Geib, Julian R Dupuis
HiMAP2: Identifying phylogenetically informative genetic markers from diverse genomic resources. Molecular ecology resources (2023)
Kim L Vertacnik, Danielle K Herrig, R Keating Godfrey, Tom Hill, Scott M Geib, Robert L Unckless, David Ralph Nelson, Catherine R Linnen
Evolution of five environmentally responsive gene families in a pine-feeding sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae). Ecology and evolution 13 (10) (2023)
Daniel F Paulo, Alex Y Cha, Angela N Kauwe, Keena Curbelo, Renee L Corpuz, Tyler J Simmonds, Sheina B Sim, Scott M Geib
A Unified Protocol for CRISPR/Cas9-Mediated Gene Knockout in Tephritid Fruit Flies Led to the Recreation of White Eye and White Puparium Phenotypes in the Melon Fly. Journal of economic entomology (2022)
Amanda R Stahlke, Jennifer Chang, Luke R Tembrock, Sheina B Sim, Sivanandan Chudalayandi, Scott M Geib, Brian E Scheffler, Omaththage P Perera, Todd M Gilligan, Anna K Childers, Kevin J Hackett, Brad Steven Coates
A chromosome-scale genome assembly of a Helicoverpa zea strain resistant to Bacillus thuringiensis Cry1Ac insecticidal protein. Genome biology and evolution (2022)
Anna K Childers, Scott M Geib, Sheina B Sim, Monica F Poelchau, Brad S Coates, Tyler J Simmonds, Erin D Scully, Timothy P L Smith, Christopher P Childers, Renee L Corpuz, Kevin J Hackett, Brian Scheffler
The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research. Insects 12 (7) (2021)
M Renee Bellinger, Roshan Paudel, Steven Starnes, Lukas Kambic, Michael B Kantar, Thomas K Wolfgruber, Kurt H Lamour, Scott M Geib, Sheina B Sim, Susan C Miyasaka, Martin Helmkampf, Michael Shintaku
Taro Genome Assembly and Linkage Map Reveal QTLs for Resistance to Taro Leaf Blight. G3 (Bethesda, Md.) 10 (8) (2020)
Xiaohong Han, Ciding Lu, Scott M Geib, Junxian Zheng, Songqing Wu, Feiping Zhang, Guanghong Liang
Characterization of Dendrolimus houi Lajonquiere (Lepidoptera: Lasiocampidae) Transcriptome across All Life Stages. Insects 10 (12) (2019)
Julian R Dupuis, Raul Ruiz-Arce, Norman B Barr, Donald B Thomas, Scott M Geib
Range-wide population genomics of the Mexican fruit fly: Toward development of pathway analysis tools. Evolutionary applications 12 (8) (2019)
Jonathan Bradley Reil, Camiel Doorenweerd, Michael San Jose, Sheina B Sim, Scott M Geib, Daniel Rubinoff
Transpacific coalescent pathways of coconut rhinoceros beetle biotypes: Resistance to biological control catalyses resurgence of an old pest. Molecular ecology 27 (22) (2018)
Julian R Dupuis, Richard S Peigler, Scott M Geib, Daniel Rubinoff
Phylogenomics supports incongruence between ecological specialization and taxonomy in a charismatic clade of buck moths. Molecular ecology 27 (22) (2018)
Julian R Dupuis, Forest T Bremer, Angela Kauwe, Michael San Jose, Luc Leblanc, Daniel Rubinoff, Scott M Geib
HiMAP: Robust phylogenomics from highly multiplexed amplicon sequencing. Molecular ecology resources (2018)
Erin D Scully, Scott M Geib, Charles J Mason, John E Carlson, Ming Tien, Han-Yi Chen, Scott Harding, Chung-Jui Tsai, Kelli Hoover
Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis). Scientific reports 8 (1) (2018)
Chiou Ling Chang, Scott M Geib
Comparative Proteomic Profiling between Each of Two Consecutive Developmental Stages of the Solanum Fruit Fly, Bactrocera latifrons (Hendel). International journal of molecular sciences 19 (7) (2018)
Scott M Geib, Guang Hong Liang, Terence D Murphy, Sheina B Sim
Whole Genome Sequencing of the Braconid Parasitoid Wasp Fopius arisanus, an Important Biocontrol Agent of Pest Tepritid Fruit Flies. G3 (Bethesda, Md.) 7 (8) (2017)
Sheina B Sim, Scott M Geib
A Chromosome-Scale Assembly of the Bactrocera cucurbitae Genome Provides Insight to the Genetic Basis of white pupae. G3 (Bethesda, Md.) 7 (6) (2017)
Sheina B Sim, Raul Ruiz-Arce, Norman B Barr, Scott M Geib
A New Diagnostic Resource for Ceratitis capitata Strain Identification Based on QTL Mapping. G3 (Bethesda, Md.) 7 (11) (2017)
Jon Y Suzuki, Teresita D Amore, Bernarda Calla, Nathan A Palmer, Erin D Scully, Scott E Sattler, Gautam Sarath, Joanne S Lichty, Roxana Y Myers, Lisa M Keith, Tracie K Matsumoto, Scott M Geib
Organ-specific transcriptome profiling of metabolic and pigment biosynthesis pathways in the floral ornamental progenitor species Anthurium amnicola Dressler. Scientific reports 7 (1) (2017)
Julian R Dupuis, Forest T Bremer, Thibaut Jombart, Sheina B Sim, Scott M Geib
mvmapper: Interactive spatial mapping of genetic structures. Molecular ecology resources 18 (2) (2017)

Scott M Geib.css-eqlu8i{font-size:small;padding-left:4px;} (S M Geib, Scott Geib)

Publication Activity (10 Years)

Top Topics

Top Venues

Scott M Geib (S M Geib, Scott Geib)