Bruno Contreras-Moreira

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2022
Publications (10 Years): 8

Top Venues

F1000Research

Plants (Basel, Switzerland)

The plant genome

The Plant journal : for cell and molecular biology

European Bioinformatics Institute - EMBL

This page only lists publications with an associated author ORCID identifier.

Affiliation History

European Bioinformatics Institute - EMBL Oct 01 2018

United Kingdom

Ensembl Plants Project Leader

Estación Experimental de Aula Dei - CSIC Sep 01 2007 - Sep 30 2018

Spain

Group leader :: Computational and Structural Biology lab

Fundación Agencia Aragonesa para la Investigación y el Desarrollo Sep 01 2007 - Sep 30 2018

Spain

Group leader :: Computational and Structural Biology lab

Centro de Ciencias Genómicas - UNAM Oct 01 2004

Mexico

postdoc with Julio Collado-Vides, part of RegulonDB team

Centro Nacional de Biotecnología - CSIC

Spain

posdoc with Alfonso Valencia :: Protein Design Group

Cancer Research UK & University College London

United Kingdom

PhD student with Paul Bates :: Biomolecular Modelling Lab

Publications

Rubén Sancho, Pilar Catalán, Bruno Contreras-Moreira, Thomas E Juenger, David L Des Marais
Patterns of pan-genome occupancy and gene coexpression under water-deficit in Brachypodium distachyon. Molecular ecology 31 (20) (2022)
Ruben Sancho, Luis A Inda, Antonio Díaz-Pérez, David L Des Marais, Sean P Gordon, John P Vogel, Joanna Lusinska, Robert Hasterok, Bruno Contreras-Moreira, Pilar Catalan
Tracking the ancestry of known and 'ghost' homeologous subgenomes in model grass Brachypodium polyploids. The Plant journal : for cell and molecular biology 109 (6) (2022)
Sebastian Beier, Anne Fiebig, Cyril Pommier, Isuru Liyanage, Matthias Lange, Paul J Kersey, Stephan Weise, Richard Finkers, Baron Koylass, Timothee Cezard, Mélanie Courtot, Bruno Contreras-Moreira, Guy Naamati, Sarah Dyer, Uwe Scholz
Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR. F1000Research 11 (2022)
Walter Santana-Garcia, Jaime A Castro-Mondragon, Mónica Padilla-Gálvez, Nga Thi Thuy Nguyen, Ana Elizondo-Salas, Najla Ksouri, François Gerbes, Denis Thieffry, Pierre Vincens, Bruno Contreras-Moreira, Jacques van Helden, Morgane Thomas-Chollier, Alejandra Medina-Rivera
RSAT 2022: regulatory sequence analysis tools. Nucleic acids research (2022)
Sebastian Beier, Anne Fiebig, Cyril Pommier, Isuru Liyanage, Matthias Lange, Paul J Kersey, Stephan Weise, Richard Finkers, Baron Koylass, Timothee Cezard, Mélanie Courtot, Bruno Contreras-Moreira, Guy Naamati, Sarah Dyer, Uwe Scholz
Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR. F1000Research 11 (2022)
Maria Angeles Decena, Sergio Gálvez-Rojas, Federico Agostini, Ruben Sancho, Bruno Contreras-Moreira, David L Des Marais, Pilar Hernandez, Pilar Catalan
Comparative Genomics, Evolution, and Drought-Induced Expression of Dehydrin Genes in Model Brachypodium Grasses. Plants (Basel, Switzerland) 10 (12) (2021)
Bruno Contreras-Moreira, Carla V Filippi, Guy Naamati, Carlos García Girón, James E Allen, Paul Flicek
K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes. The plant genome 14 (3) (2021)
Sean P Gordon, Bruno Contreras-Moreira, Daniel P Woods, David L Des Marais, Diane Burgess, Shengqiang Shu, Christoph Stritt, Anne C Roulin, Wendy Schackwitz, Ludmila Tyler, Joel A Martin, Anna Lipzen, Niklas Dochy, Jeremy Phillips, Kerrie Barry, Koen Geuten, Hikmet Budak, Thomas E Juenger, Richard M Amasino, Ana L Caicedo, David M Goodstein, Patrick Davidson, Luis Alejandro Jose Mur, Melania Figueroa, Michael Freeling, Pilar Catalan, John P Vogel
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure. Nature communications 8 (1) (2017)

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Publication Activity (10 Years)

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Bruno Contreras-Moreira