Carmay Lim

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 42

Top Topics

Molecular Dynamics Simulations

Multiple Myeloma

Amyotrophic Lateral Sclerosis

Crystal Structure

Top Venues

Journal of chemical theory and computation

The journal of physical chemistry. B

Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Chemical science

This page only lists publications with an associated author ORCID identifier.

Publications

C Satheesan Babu, Jih-Ying Chen, Carmay Lim
Solution Ionic Strength Can Modulate Functional Loop Conformations in E. coli Dihydrofolate Reductase. The journal of physical chemistry. B 128 (17) (2024)
Xiaojuan Hu, Kazi S Amin, Markus Schneider, Carmay Lim, Dennis Salahub, Carsten Baldauf
System-Specific Parameter Optimization for Nonpolarizable and Polarizable Force Fields. Journal of chemical theory and computation (2024)
Xiaojuan Hu, Kazi S Amin, Markus Schneider, Carmay Lim, Dennis Salahub, Carsten Baldauf
System-Specific Parameter Optimization for Nonpolarizable and Polarizable Force Fields. Journal of chemical theory and computation 20 (3) (2024)
Yao Chi Chen, Karen Sargsyan, Jon D Wright, Yu-Hsien Chen, Yi-Shuian Huang, Carmay Lim
PPI-hotspot ID for detecting protein-protein interaction hot spots from the free protein structure. eLife 13 (2024)
Xiaojuan Hu, Kazi S Amin, Markus Schneider, Carmay Lim, Dennis Salahub, Carsten Baldauf
System-Specific Parameter Optimization for Nonpolarizable and Polarizable Force Fields. Journal of chemical theory and computation 20 (3) (2024)
C Satheesan Babu, Jih-Ying Chen, Carmay Lim
Solution Ionic Strength Can Modulate Functional Loop Conformations in E. coli Dihydrofolate Reductase. The journal of physical chemistry. B (2024)
Yueh-Hsiang Yu, Wei-Ting Tian, Cédric Grauffel, Wei-Chen Lin, Ming-Yu Hsieh, Pei-Wen Wu, Hui-Ju Lee, Chi-Jiun Peng, Pei-Hsuan Lin, Hsing-Mao Chu, Carmay Lim, Tse-Wen Chang
An Antibody-Drug Conjugate for Multiple Myeloma Prepared by Multi-Arm Linkers. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
C Satheesan Babu, Jih-Ying Chen, Carmay Lim
Solution Ionic Strength Can Modulate Functional Loop Conformations in E. coli Dihydrofolate Reductase. The journal of physical chemistry. B 128 (17) (2024)
Yueh-Hsiang Yu, Wei-Ting Tian, Cédric Grauffel, Wei-Chen Lin, Ming-Yu Hsieh, Pei-Wen Wu, Hui-Ju Lee, Chi-Jiun Peng, Pei-Hsuan Lin, Hsing-Mao Chu, Carmay Lim, Tse-Wen Chang
An Antibody-Drug Conjugate for Multiple Myeloma Prepared by Multi-Arm Linkers. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
Yueh-Hsiang Yu, Wei-Ting Tian, Cédric Grauffel, Wei-Chen Lin, Ming-Yu Hsieh, Pei-Wen Wu, Hui-Ju Lee, Chi-Jiun Peng, Pei-Hsuan Lin, Hsing-Mao Chu, Carmay Lim, Tse-Wen Chang
An Antibody-Drug Conjugate for Multiple Myeloma Prepared by Multi-Arm Linkers. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 11 (20) (2024)
Yueh-Hsiang Yu, Wei-Ting Tian, Cédric Grauffel, Wei-Chen Lin, Ming-Yu Hsieh, Pei-Wen Wu, Hui-Ju Lee, Chi-Jiun Peng, Pei-Hsuan Lin, Hsing-Mao Chu, Carmay Lim, Tse-Wen Chang
An Antibody-Drug Conjugate for Multiple Myeloma Prepared by Multi-Arm Linkers. Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2024)
C Satheesan Babu, Jih-Ying Chen, Carmay Lim
Solution Ionic Strength Can Modulate Functional Loop Conformations in E. coli Dihydrofolate Reductase. The journal of physical chemistry. B 128 (17) (2024)
Xiaojuan Hu, Kazi S Amin, Markus Schneider, Carmay Lim, Dennis Salahub, Carsten Baldauf
System-Specific Parameter Optimization for Nonpolarizable and Polarizable Force Fields. Journal of chemical theory and computation 20 (3) (2024)
C Satheesan Babu, Jih-Ying Chen, Carmay Lim
Solution Ionic Strength Can Modulate Functional Loop Conformations in E. coli Dihydrofolate Reductase. The journal of physical chemistry. B 128 (17) (2024)
Karine Mazmanian, Cédric Grauffel, Todor M Dudev, Carmay Lim
Protein Ca 2+ -Sites Prone to Sr 2+ Substitution: Implications for Strontium Therapy. The journal of physical chemistry. B (2023)
Li-An Chen, Yueh-Hsiang Yu, Wei-Ting Tian, Wei-Chen Lin, Cédric Grauffel, Chun-Yi Wu, Chuan-Lin Chen, Carmay Lim, Hsing-Mao Chu, Tse-Wen Chang, Chi-Jiun Peng
Site-specific Conjugation of 6 DOTA Chelators to a CA19-9-targeting scFv-Fc Antibody for Imaging and Therapy. Journal of medicinal chemistry (2023)
Ting Chen, Cédric Grauffel, Wei-Zen Yang, Yi-Ping Chen, Hanna S Yuan, Carmay Lim
Efficient Strategy to Design Protease Inhibitors: Application to Enterovirus 71 2A Protease. ACS bio & med chem Au 2 (4) (2022)
Karine Mazmanian, Ting Chen, Karen Sargsyan, Carmay Lim
From quantum-derived principles underlying cysteine reactivity to combating the COVID-19 pandemic. Wiley interdisciplinary reviews. Computational molecular science 12 (5) (2022)
Cédric Grauffel, Wei-Hsiang Weng, Carmay Lim
Factors allowing small monovalent Li + to displace Ca 2+ in proteins. Physical chemistry chemical physics : PCCP 24 (29) (2022)
Yao Chi Chen, Yu-Hsien Chen, Jon D Wright, Carmay Lim
PPI-Hotspot DB : Database of Protein-Protein Interaction Hot Spots. Journal of chemical information and modeling 62 (4) (2022)
Ting Chen, Cédric Grauffel, Wei-Zen Yang, Yi-Ping Chen, Hanna S Yuan, Carmay Lim
Efficient Strategy to Design Protease Inhibitors: Application to Enterovirus 71 2A Protease. ACS bio & med chem Au 2 (4) (2022)
Cédric Grauffel, Wei-Hsiang Weng, Todor M Dudev, Carmay Lim
Trinuclear Calcium Site in the C2 Domain of PKCα/γ Is Prone to Lithium Attack. ACS omega 6 (31) (2021)
Ting Chen, Cheng-Yin Fei, Yi-Ping Chen, Karen Sargsyan, Jian-Jong Liang, Chun-Che Liao, Yi-Ling Lin, Chun-Ping Chang, Hanna S Yuan, Carmay Lim
Correction to "Synergistic Inhibition of SARS-CoV-2 Replication Using Disulfiram/Ebselen and Remdesivir". ACS pharmacology & translational science 4 (3) (2021)
Mei-Ying He, Yu-Jen Lin, Yi-Ling Kao, Pu Kuo, Cédric Grauffel, Carmay Lim, Yi-Sheng Cheng, Hsin-Hung David Chou
Sensitive and Specific Cadmium Biosensor Developed by Reconfiguring Metal Transport and Leveraging Natural Gene Repositories. ACS sensors 6 (3) (2021)
Karen Sargsyan, Chien-Chu Lin, Ting Chen, Cédric Grauffel, Yi-Ping Chen, Wei-Zen Yang, Jian-Jong Liang, Chun-Che Liao, Yi-Ling Lin, Hanna S Yuan, Carmay Lim
Correction: Multi-targeting of functional cysteines in multiple conserved SARS-CoV-2 domains by clinically safe Zn-ejectors. Chemical science 12 (17) (2021)
Kazi S Amin, Xiaojuan Hu, Dennis R Salahub, Carsten Baldauf, Carmay Lim, Sergei Yu Noskov
Benchmarking polarizable and non-polarizable force fields for Ca2+-peptides against a comprehensive QM dataset. The Journal of chemical physics 153 (14) (2021)
C Satheesan Babu, Carmay Lim
Influence of solution ionic strength on the stabilities of M20 loop conformations in apo E. coli dihydrofolate reductase. The Journal of chemical physics 154 (19) (2021)
Todor M Dudev, Cédric Grauffel, Carmay Lim
Calcium in Signaling: Its Specificity and Vulnerabilities toward Biogenic and Abiogenic Metal Ions. The journal of physical chemistry. B 125 (37) (2021)
Karen Sargsyan, Chien-Chu Lin, Ting Chen, Cédric Grauffel, Yi-Ping Chen, Wei-Zen Yang, Hanna S Yuan, Carmay Lim
Multi-targeting of functional cysteines in multiple conserved SARS-CoV-2 domains by clinically safe Zn-ejectors. Chemical science 11 (36) (2020)
Karine Mazmanian, Karen Sargsyan, Carmay Lim
How the Local Environment of Functional Sites Regulates Protein Function. Journal of the American Chemical Society 142 (22) (2020)
C Satheesan Babu, Carmay Lim
Sensitivity of Functional Loop Conformations on Long-Range Electrostatics: Implications for M20 Loop Dynamics in E. coli Dihydrofolate Reductase. Journal of chemical theory and computation 16 (4) (2020)
Chih-Chia Chang, Ching-Jou Chen, Cédric Grauffel, Yu-Chung Pien, Carmay Lim, Su-Yi Tsai, Kuo-Chiang Hsia
Ran pathway-independent regulation of mitotic Golgi disassembly by Importin-α. Nature communications 10 (1) (2019)
Yu-Ming Lee, Cédric Grauffel, Ting Chen, Karen Sargsyan, Carmay Lim
Factors Governing the Different Functions of Zn2+-Sites with Identical Ligands in Proteins. Journal of chemical information and modeling 59 (9) (2019)
Cédric Grauffel, Todor M Dudev, Carmay Lim
Why Cellular Di/Triphosphates Preferably Bind Mg2+ and Not Ca2. Journal of chemical theory and computation 15 (12) (2019)
Hui-Chung Tai, Carmay Lim
Gene Silencing Mechanisms Revealed by Dynamics of Guide, Target, and Duplex Binding to Argonaute. Journal of chemical theory and computation 16 (1) (2019)
Todor M Dudev, Karine Mazmanian, Wei-Hsiang Weng, Cédric Grauffel, Carmay Lim
Free and Bound Therapeutic Lithium in Brain Signaling. Accounts of chemical research 52 (10) (2019)
Todor M Dudev, Karine Mazmanian, Carmay Lim
Competition between Li+ and Na+ in sodium transporters and receptors: Which Na+-Binding sites are "therapeutic" Li+ targets? Chemical science 9 (17) (2018)
Todor M Dudev, Cédric Grauffel, Carmay Lim
How Pb2+ Binds and Modulates Properties of Ca2+-Signaling Proteins. Inorganic chemistry 57 (23) (2018)
Todor M Dudev, Cédric Grauffel, Shang-Te Danny Hsu, Carmay Lim
How Native and Non-Native Cations Bind and Modulate the Properties of GTP/ATP. Journal of chemical theory and computation 14 (6) (2018)
Karine Mazmanian, Todor M Dudev, Carmay Lim
How First Shell-Second Shell Interactions and Metal Substitution Modulate Protein Function. Inorganic chemistry 57 (22) (2018)
Nicole N Nuñez, Cindy Khuu, C Satheesan Babu, Steve J Bertolani, Anisha N Rajavel, Jensen E Spear, Jeremy A Armas, Jon D Wright, Justin B Siegel, Carmay Lim, Sheila S David
The Zinc Linchpin Motif in the DNA Repair Glycosylase MUTYH: Identifying the Zn2+ Ligands and Roles in Damage Recognition and Repair. Journal of the American Chemical Society 140 (41) (2018)
Karen Sargsyan, Cédric Grauffel, Carmay Lim
How Molecular Size Impacts RMSD Applications in Molecular Dynamics Simulations. Journal of chemical theory and computation 13 (4) (2017)