Caroline Dean

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 34

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Nature

Plant physiology

eLife

John Innes Centre

This page only lists publications with an associated author ORCID identifier.

Affiliation History

John Innes Centre Sep 02 1988

United Kingdom

Project Leader :: Cell and Developmental Biology

Publications

Robert Maple, Pan Zhu, Jo Hepworth, Jia-Wei Wang, Caroline Dean
Flowering time: from physiology, through genetics to mechanism. Plant physiology (2024)
Robert Maple, Pan Zhu, Jo Hepworth, Jia-Wei Wang, Caroline Dean
Flowering time: From physiology, through genetics to mechanism. Plant physiology 195 (1) (2024)
Robert Maple, Pan Zhu, Jo Hepworth, Jia-Wei Wang, Caroline Dean
Flowering time: From physiology, through genetics to mechanism. Plant physiology 195 (1) (2024)
Robert Maple, Pan Zhu, Jo Hepworth, Jia-Wei Wang, Caroline Dean
Flowering time: From physiology, through genetics to mechanism. Plant physiology 195 (1) (2024)
Mathias Nielsen, Govind Menon, Yusheng Zhao, Eduardo Mateo-Bonmati, Philip Wolff, Shaoli Zhou, Martin Howard, Caroline Dean
COOLAIR and PRC2 function in parallel to silence FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America 121 (4) (2024)
Mathias Nielsen, Govind Menon, Yusheng Zhao, Eduardo Mateo-Bonmati, Philip Wolff, Shaoli Zhou, Martin Howard, Caroline Dean
COOLAIR and PRC2 function in parallel to silence FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America 121 (4) (2024)
Mathias Nielsen, Govind Menon, Yusheng Zhao, Eduardo Mateo-Bonmati, Philip Wolff, Shaoli Zhou, Martin Howard, Caroline Dean
COOLAIR and PRC2 function in parallel to silence FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America 121 (4) (2024)
Mathias Nielsen, Govind Menon, Yusheng Zhao, Eduardo Mateo-Bonmati, Philip Wolff, Shaoli Zhou, Martin Howard, Caroline Dean
COOLAIR and PRC2 function in parallel to silence FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America 121 (4) (2024)
Mathias Nielsen, Govind Menon, Yusheng Zhao, Eduardo Mateo-Bonmati, Philip Wolff, Shaoli Zhou, Martin Howard, Caroline Dean
COOLAIR and PRC2 function in parallel to silence FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America 121 (4) (2024)
Pan Zhu, Caroline Dean
Reply to: Cold induction of nuclear FRIGIDA condensation in Arabidopsis. Nature 619 (7969) (2023)
Oliver Bell, Adam Burton, Caroline Dean, Susan M Gasser, Maria-Elena Torres-Padilla
Heterochromatin definition and function. Nature reviews. Molecular cell biology (2023)
Rea Laila Antoniou-Kourounioti, Anis Meschichi, Svenja Reeck, Scott Berry, Govind Menon, Yusheng Zhao, John A Fozard, Terri Holmes, Lihua Zhao, Huamei Wang, Matthew Hartley, Caroline Dean, Stefanie Rosa, Martin Howard
Integrating analog and digital modes of gene expression at Arabidopsis FLC . eLife 12 (2023)
John S Mattick, Paulo P Amaral, Piero Carnici, Susan Carpenter, Howard Y Chang, Ling-Ling Chen, Runsheng Chen, Caroline Dean, Marcel E Dinger, Katherine A Fitzgerald, Thomas R Gingeras, Mitchell Guttman, Tetsuro Hirose, Maite Huarte, Rory Johnson, Chandrasekhar Kanduri, Philipp Kapranov, Jeanne B Lawrence, Jeannie T Lee, Joshua T Mendell, Timothy R Mercer, Kathryn J Moore, Shinichi Nakagawa, John L Rinn, David L Spector, Igor Ulitsky, Yue Wan, Jeremy E Wilusz, Mian Wu
Long non-coding RNAs: definitions, functions, challenges and recommendations. Nature reviews. Molecular cell biology (2023)
Sterling Field, Geng-Jen Jang, Caroline Dean, Lucia C Strader, Seung Yon Rhee
Plants use molecular mechanisms mediated by biomolecular condensates to integrate environmental cues with development. The Plant cell (2023)
Pan Zhu, Clare Lister, Caroline Dean
Author Correction: Cold-induced Arabidopsis FRIGIDA nuclear condensates for FLC repression. Nature (2023)
Benjamin Brachi, Daniele Filiault, Hannah Whitehurst, Paul Darme, Pierre Le Gars, Marine Le Mentec, Timothy C Morton, Envel Kerdaffrec, Fernando Rabanal, Alison Anastasio, Mathew S Box, Susan Duncan, Feng Huang, Riley Leff, Polina Novikova, Matthew Perisin, Takashi Tsuchimatsu, Roderick Woolley, Caroline Dean, Magnus Nordborg, Svante Holm, Joy Bergelson
Plant genetic effects on microbial hubs impact host fitness in repeated field trials. Proceedings of the National Academy of Sciences of the United States of America 119 (30) (2022)
Minglei Yang, Pan Zhu, Jitender Cheema, Rebecca H Bloomer, Pawel Mikulski, Qi Liu, Yueying Zhang, Caroline Dean, Yiliang Ding
In vivo single-molecule analysis reveals COOLAIR RNA structural diversity. Nature 609 (7926) (2022)
Pawel Mikulski, Philip Wolff, Tiancong Lu, Mathias Nielsen, Elsa Franco Echevarria, Danling Zhu, Julia I Questa, Gerhard Saalbach, Carlo Martins, Caroline Dean
VAL1 acts as an assembly platform co-ordinating co-transcriptional repression and chromatin regulation at Arabidopsis FLC. Nature communications 13 (1) (2022)
Colette L Baxter, Saša Šviković, Julian E Sale, Caroline Dean, Silvia Costa
The intersection of DNA replication with antisense 3' RNA processing in Arabidopsis FLC chromatin silencing. Proceedings of the National Academy of Sciences of the United States of America 118 (28) (2021)
Michael A Schon, Catherine Baxter, Congyao Xu, Balaji Enugutti, Michael D Nodine, Caroline Dean
Antagonistic activities of cotranscriptional regulators within an early developmental window set FLC expression level. Proceedings of the National Academy of Sciences of the United States of America 118 (17) (2021)
Alexander Calderwood, Jo Hepworth, Shannon Woodhouse, Lorelei Bilham, D Marc Jones, Eleri Tudor, Mubarak Ali, Caroline Dean, Rachel Wells, Judith A Irwin, Richard James Morris
Comparative transcriptomics reveals desynchronisation of gene expression during the floral transition between Arabidopsis and Brassica rapa cultivars. Quantitative plant biology 2 (2021)
Congyao Xu, Zhe Wu, Hong-Chao Duan, Xiaofeng Fang, Gui-Fang Jia, Caroline Dean
R-loop resolution promotes co-transcriptional chromatin silencing. Nature communications 12 (1) (2021)
Cecilia Lövkvist, Pawel Mikulski, Svenja Reeck, Matthew Hartley, Caroline Dean, Martin Howard
Hybrid protein assembly-histone modification mechanism for PRC2-based epigenetic switching and memory. eLife 10 (2021)
Pan Zhu, Clare Lister, Caroline Dean
Cold-induced Arabidopsis FRIGIDA nuclear condensates for FLC repression. Nature 599 (7886) (2021)
Yusheng Zhao, Pan Zhu, Jo Hepworth, Rebecca Bloomer, Rea Laila Antoniou-Kourounioti, Jade Doughty, Amelie Heckmann, Congyao Xu, Hongchun Yang, Caroline Dean
Natural temperature fluctuations promote COOLAIR regulation of FLC. Genes & development 35 (11-12) (2021)
Congyao Xu, Xiaofeng Fang, Tiancong Lu, Caroline Dean
Antagonistic cotranscriptional regulation through ARGONAUTE1 and the THO/TREX complex orchestrates FLC transcriptional output. Proceedings of the National Academy of Sciences of the United States of America 118 (47) (2021)
Eleri H Tudor, D Marc Jones, Zhesi He, Ian Bancroft, Martin Trick, Rachel Wells, Judith A Irwin, Caroline Dean
QTL-seq identifies BnaFT.A02 and BnaFLC.A02 as candidates for variation in vernalization requirement and response in winter oilseed rape (Brassica napus). Plant biotechnology journal 18 (12) (2020)
Yusheng Zhao, Rea Laila Antoniou-Kourounioti, Grant Calder, Caroline Dean, Martin Howard
Temperature-dependent growth contributes to long-term cold sensing. Nature 583 (7818) (2020)
Rebecca H Bloomer, Claire E Hutchison, Isabel Bäurle, James Walker, Xiaofeng Fang, Pumi Perera, Christos N Velanis, Serin Gümüs, Christos Spanos, Juri Rappsilber, Xiaoqi Feng, Justin Goodrich, Caroline Dean
The Arabidopsis epigenetic regulator ICU11 as an accessory protein of Polycomb Repressive Complex 2. Proceedings of the National Academy of Sciences of the United States of America 117 (28) (2020)
Jo Hepworth, Rea Laila Antoniou-Kourounioti, Kristina Berggren, Catja Selga, Eleri H Tudor, Bryony Yates, Deborah Cox, Barley Rose Collier Harris, Judith A Irwin, Martin Howard, Torbjörn Säll, Svante Holm, Caroline Dean
Natural variation in autumn expression is the major adaptive determinant distinguishing Arabidopsis FLC haplotypes. eLife 9 (2020)
Xiaofeng Fang, Zhe Wu, Oleg Raitskin, Kimberly M Webb, Philipp Voigt, Tiancong Lu, Martin Howard, Caroline Dean
The 3' processing of antisense RNAs physically links to chromatin-based transcriptional control. Proceedings of the National Academy of Sciences of the United States of America 117 (26) (2020)
Zhe Wu, Xiaofeng Fang, Danling Zhu, Caroline Dean
Autonomous Pathway: FLOWERING LOCUS C Repression through an Antisense-Mediated Chromatin-Silencing Mechanism. Plant physiology 182 (1) (2019)
Silvia Costa, Caroline Dean
Storing memories: the distinct phases of Polycomb-mediated silencing of Arabidopsis FLC. Biochemical Society transactions 47 (4) (2019)
Hongchun Yang, Scott Berry, Tjelvar S G Olsson, Matthew Hartley, Martin Howard, Caroline Dean
Distinct phases of Polycomb silencing to hold epigenetic memory of cold in Arabidopsis. Science (New York, N.Y.) 357 (6356) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Caroline Dean