Carsten Marr (C Marr)

ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 29

Top Venues

eLife

Nature communications

PLOS digital health

Nature biotechnology

Helmholtz Zentrum München - German Research Center for Environmental Health

Technische Universitat Darmstadt (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Helmholtz Zentrum München - German Research Center for Environmental Health May 01 2013

Germany

PI and deputy director :: Institute of Computational Biology

Helmholtz Zentrum München

Germany

Postdoc :: Institute of Bioinformatics and Systems Biology

University of Edinburgh

United Kingdom

Visiting Scientist :: SynthSys Center for Synthetic and Systems Biology

Jacobs University Bremen gGmbH

Germany

Postdoc

Florida Atlantic University Center for Complex Systems and Brain Sciences

United States

Visiting scientist

Imperial College London

United Kingdom

Visiting Scientist :: Physics

Education History

Technische Universitat Darmstadt

Germany

PHD :: Department of Biology

Publications

Lennart Kuck, Antony P McNamee, Maria Bordukova, Ario Sadafi, Carsten Marr, Jason N Peart, Michael J Simmonds
Lysis of human erythrocytes due to Piezo1-dependent cytosolic calcium overload as a mechanism of circulatory removal. Proceedings of the National Academy of Sciences of the United States of America 121 (36) (2024)
Shruthi Kalgudde Gopal, Ruoxuan Dai, Ania Maria Stefanska, Meshal Ansari, Jiakuan Zhao, Pushkar Ramesh, Johannes W Bagnoli, Donovan Correa-Gallegos, Yue Lin, Simon Christ, Ilias Angelidis, Valerio Lupperger, Carsten Marr, Lindsay C Davies, Wolfgang Enard, Hans-Günther Machens, Herbert B Schiller, Dongsheng Jiang, Yuval Rinkevich
Wound infiltrating adipocytes are not myofibroblasts. Nature communications 14 (1) (2023)
Matthias Hehr, Ario Sadafi, Christian Matek, Peter Lienemann, Christian Pohlkamp, Torsten Haferlach, Karsten Spiekermann, Carsten Marr
Explainable AI identifies diagnostic cells of genetic AML subtypes. PLOS digital health 2 (3) (2023)
Sayedali Shetab Boushehri, Katharina Essig, Nikolaos-Kosmas Chlis, Sylvia Herter, Marina Bacac, Fabian Joachim Theis, Elke Glasmacher, Carsten Marr, Fabian Schmich
Explainable machine learning for profiling the immunological synapse and functional characterization of therapeutic antibodies. Nature communications 14 (1) (2023)
Matthias Hehr, Ario Sadafi, Christian Matek, Peter Lienemann, Christian Pohlkamp, Torsten Haferlach, Karsten Spiekermann, Carsten Marr
Explainable AI identifies diagnostic cells of genetic AML subtypes. PLOS digital health 2 (3) (2023)
Adrian Gottschlich, Moritz Thomas, Ruth Grünmeier, Stefanie Lesch, Lisa Rohrbacher, Veronika Igl, Daria Briukhovetska, Mohamed-Reda Benmebarek, Binje Vick, Sertac Dede, Katharina Müller, Tao Xu, Dario Dhoqina, Florian Märkl, Sophie Robinson, Andrea Sendelhofert, Heiko Schulz, Öykü Umut, Vladyslav Kavaka, Christina Angeliki Tsiverioti, Emanuele Carlini, Sayantan Nandi, Thaddäus Strzalkowski, Theo Lorenzini, Sophia Stock, Philipp Jie Müller, Janina Dörr, Matthias Seifert, Bruno Loureiro Cadilha, Ruben Brabenec, Natalie Röder, Felicitas Rataj, Manuel Nüesch, Franziska Modemann, Jasmin Wellbrock, Walter Fiedler, Christian Kellner, Eduardo Beltrán, Tobias Herold, Dominik Paquet, Irmela Jeremias, Louisa von Baumgarten, Stefan Endres, Marion Subklewe, Carsten Marr, Sebastian Kobold
Single-cell transcriptomic atlas-guided development of CAR-T cells for the treatment of acute myeloid leukemia. Nature biotechnology (2023)
Matthias Hehr, Ario Sadafi, Christian Matek, Peter Lienemann, Christian Pohlkamp, Torsten Haferlach, Karsten Spiekermann, Carsten Marr
Explainable AI identifies diagnostic cells of genetic AML subtypes. PLOS digital health 2 (3) (2023)
Sophia J Wagner, Christian Matek, Sayedali Shetab Boushehri, Melanie Boxberg, Lorenz Lamm, Ario Sadafi, Dominik J E Waibel, Carsten Marr, Tingying Peng
Make deep learning algorithms in computational pathology more reproducible and reusable. Nature medicine 28 (9) (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Lea Schuh, Igor Kukhtevich, Poonam Bheda, Melanie Schulz, Maria Bordukova, Robert Schneider, Carsten Marr
Altered expression response upon repeated gene repression in single yeast cells. PLoS computational biology 18 (10) (2022)
Kang-Xuan Jin, Rujuan Zuo, Konstantinos Anastassiadis, Arne Klungland, Carsten Marr, Adam Filipczyk
N6-methyladenosine (m 6 A) depletion regulates pluripotency exit by activating signaling pathways in embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America 118 (51) (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Ziqi Yu, Xiaoyang Han, Wenjing Xu, Jie Zhang, Carsten Marr, Dinggang Shen, Tingying Peng, Xiao-Yong Zhang, Jian-Feng Feng
A generalizable brain extraction net (BEN) for multimodal MRI data from rodents, nonhuman primates, and humans. eLife 11 (2022)
Emmanuel Klinger, Alessandro Motta, Carsten Marr, Fabian Joachim Theis, Moritz Helmstaedter
Cellular connectomes as arbiters of local circuit models in the cerebral cortex. Nature communications 12 (1) (2021)
Dominik Jens Elias Waibel, Sayedali Shetab Boushehri, Carsten Marr
InstantDL: an easy-to-use deep learning pipeline for image segmentation and classification. BMC bioinformatics 22 (1) (2021)
Christian Matek, Sebastian Krappe, Christian Münzenmayer, Torsten Haferlach, Carsten Marr
Highly accurate differentiation of bone marrow cell morphologies using deep neural networks on a large image data set. Blood 138 (20) (2021)
Bruno Loureiro Cadilha, Mohamed-Reda Benmebarek, Klara Dorman, Arman Oner, Theo Lorenzini, Hannah Obeck, Mira Vänttinen, Mauro Di Pilato, Jasper N Pruessmann, Stefan Stoiber, Duc Huynh, Florian Märkl, Matthias Seifert, Katrin Manske, Javier Suarez-Gosalvez, Yi Zeng, Stefanie Lesch, Clara H Karches, Constanze Heise, Adrian Gottschlich, Moritz Thomas, Carsten Marr, Jin Zhang, Dharmendra Pandey, Tobias Feuchtinger, Marion Subklewe, Thorsten R Mempel, Stefan Endres, Sebastian Kobold
Combined tumor-directed recruitment and protection from immune suppression enable CAR T cell efficacy in solid tumors. Science advances 7 (24) (2021)
Judith S Hecker, Luise Hartmann, Jennifer Rivière, Michèle C Buck, Mark van der Garde, Maja Rothenberg-Thurley, Luise Fischer, Susann Winter, Bianka Ksienzyk, Frank Ziemann, Maria Solovey, Martina Rauner, Elena Tsourdi, Katja Sockel, Marie Schneider, Anne-Sophie Kubasch, Martin Nolde, Dominikus Hausmann, Alexander C Paulus, Jörg Lützner, Andreas Roth, Florian Bassermann, Karsten Spiekermann, Carsten Marr, Lorenz C Hofbauer, Uwe Platzbecker, Klaus H Metzeler, Katharina S Götze
CHIP and hips: clonal hematopoiesis is common in patients undergoing hip arthroplasty and is associated with autoimmune disease. Blood 138 (18) (2021)
Valerio Lupperger, Carsten Marr, Prisca Chapouton
Reoccurring neural stem cell divisions in the adult zebrafish telencephalon are sufficient for the emergence of aggregated spatiotemporal patterns. PLoS biology 18 (12) (2020)
Dongsheng Jiang, Simon Christ, Donovan Correa-Gallegos, Pushkar Ramesh, Shruthi Kalgudde Gopal, Juliane Wannemacher, Christoph H Mayr, Valerio Lupperger, Qing Yu, Haifeng Ye, Martin Mück-Häusl, Vijayanand Rajendran, Li Wan, Juan Liu, Ursula Mirastschijski, Thomas Volz, Carsten Marr, Herbert B Schiller, Yuval Rinkevich
Injury triggers fascia fibroblast collective cell migration to drive scar formation through N-cadherin. Nature communications 11 (1) (2020)
Michael K Strasser, Philipp S Hoppe, Dirk Loeffler, Konstantinos D Kokkaliaris, Timm Schroeder, Fabian Joachim Theis, Carsten Marr
Lineage marker synchrony in hematopoietic genealogies refutes the PU.1/GATA1 toggle switch paradigm. Nature communications 9 (1) (2018)
E I Chatzopoulou, P Raharja-Liu, A Murschhauser, F Sekhavati, F Buggenthin, A M Vollmar, Carsten Marr, J O Rädler
A single-cell micro-trench platform for automatic monitoring of cell division and apoptosis after chemotherapeutic drug administration. Scientific reports 8 (1) (2018)
Oliver Hilsenbeck, Michael Schwarzfischer, Stavroula Skylaki, Bernhard Schauberger, Philipp S Hoppe, Dirk Loeffler, Konstantinos D Kokkaliaris, Simon Hastreiter, Eleni Skylaki, Adam Filipczyk, Michael Strasser, Felix Buggenthin, Justin S Feigelman, Jan Krumsiek, Adrianus J J van den Berg, Max Endele, Martin Etzrodt, Carsten Marr, Fabian Joachim Theis, Timm Schroeder
Software tools for single-cell tracking and quantification of cellular and molecular properties. Nature biotechnology 34 (7) (2018)
Tingying Peng, Kurt Thorn, Oliver Hilsenbeck, Lichao Wang, Fabian Joachim Theis, Carsten Marr, Nassir Navab
A BaSiC tool for background and shading correction of optical microscopy images. Nature communications 8 (2017)
Fabian Joachim Theis, Line V Ugelvig, Carsten Marr, Sylvia Cremer
Opposing effects of allogrooming on disease transmission in ant societies. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 370 (1669) (2016)

Carsten Marr.css-eqlu8i{font-size:small;padding-left:4px;} (C Marr)

Publication Activity (10 Years)

Top Topics

Top Venues

Carsten Marr (C Marr)