Christophe Avenel

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 13

Top Topics

Cancer Stem Cells

Quality Control

Top Venues

Nature neuroscience

Biological imaging

The Journal of pathology

This page only lists publications with an associated author ORCID identifier.

Publications

Axel Andersson, Andrea Behanova, Christophe Avenel, Jonas Windhager, Filip Malmberg, Carolina Wählby
Points2Regions: Fast, interactive clustering of imaging-based spatial transcriptomics data. Cytometry. Part A : the journal of the International Society for Analytical Cytology (2024)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience 26 (5) (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience 26 (5) (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience (2023)
Andrea Behanova, Christophe Avenel, Axel Andersson, Eduard Chelebian, Anna Klemm, Lina Wik, Arne Östman, Carolina Wählby
Visualization and quality control tools for large-scale multiplex tissue analysis in TissUUmaps3. Biological imaging 3 (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience 26 (5) (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience 26 (5) (2023)
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature neuroscience 26 (5) (2023)
Andrea Behanova, Christophe Avenel, Axel Andersson, Eduard Chelebian, Anna Klemm, Lina Wik, Arne Östman, Carolina Wählby
Visualization and quality control tools for large-scale multiplex tissue analysis in TissUUmaps3. Biological imaging 3 (2023)
Tove Bekkhus, Christophe Avenel, Sabella Hanna, Mathias Franzén Boger, Anna H Klemm, Daniel Vasiliu Bacovia, Fredrik Wärnberg, Carolina Wählby, Maria H Ulvmar
Automated detection of vascular remodeling in tumor-draining lymph nodes by the deep-learning tool HEV-finder. The Journal of pathology 258 (1) (2022)
Eduard Chelebian, Christophe Avenel, Kimmo Kartasalo, Maja Marklund, Anna Tanoglidi, Tuomas K Mirtti, Richard Colling, Andrew M Erickson, Alastair D Lamb, Joakim Lundeberg, Carolina Wählby
Morphological Features Extracted by AI Associated with Spatial Transcriptomics in Prostate Cancer. Cancers 13 (19) (2021)