Clifford A Meyer

ORCID

Publication Activity (10 Years)

Years Active: 2020-2023
Publications (10 Years): 14

Top Venues

Nature communications

Cancer discovery

Genome biology

Nature methods

Dana Farber Cancer Institute

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Dana Farber Cancer Institute

United States

Senior Research Scientist :: Data Sciences

Publications

Yi Zhang, Guanjue Xiang, Alva Yijia Jiang, Allen Lynch, Zexian Zeng, Chenfei Wang, Wubing Zhang, Jingyu Fan, Jiajinlong Kang, Shengqing Stan Gu, Changxin Wan, Boning Zhang, X Shirley Liu, Myles A Brown, Clifford A Meyer
MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment. Nature communications 14 (1) (2023)
Avinash Das Sahu, Xiao-Man Wang, Phillip Munson, Jan P G Klomp, Xiaoqing Wang, Shengqing Stan Gu, Ya Han, Gege Qian, Phillip Nicol, Zexian Zeng, Chenfei Wang, Collin J Tokheim, Wubing Zhang, Jingxin Fu, Jin Wang, Nishanth Ulhas Nair, Joost A P Rens, Meriem Bourajjaj, Bas Jansen, Inge Leenders, Jaap Lemmers, Mark Musters, Sanne van Zanten, Laura van Zelst, Jenny Worthington, Zhirui Hu, Dejan Juric, Clifford A Meyer, Arthur Oubrie, X Shirley Liu, David E Fisher, Keith T Flaherty
Discovery of Targets for Immune-Metabolic Antitumor Drugs Identifies Estrogen-Related Receptor Alpha. Cancer discovery 13 (3) (2023)
Allen W Lynch, Myles A Brown, Clifford A Meyer
Multi-batch single-cell comparative atlas construction by deep learning disentanglement. Nature communications 14 (1) (2023)
Avinash Das Sahu, Xiao-Man Wang, Phillip Munson, Jan P G Klomp, Xiaoqing Wang, Shengqing Stan Gu, Ya Han, Gege Qian, Phillip Nicol, Zexian Zeng, Chenfei Wang, Collin J Tokheim, Wubing Zhang, Jingxin Fu, Jin Wang, Nishanth Ulhas Nair, Joost A P Rens, Meriem Bourajjaj, Bas Jansen, Inge Leenders, Jaap Lemmers, Mark Musters, Sanne van Zanten, Laura van Zelst, Jenny Worthington, Zhirui Hu, Dejan Juric, Clifford A Meyer, Arthur Oubrie, X Shirley Liu, David E Fisher, Keith T Flaherty
Discovery of Targets for Immune-Metabolic Antitumor Drugs Identifies Estrogen-Related Receptor Alpha. Cancer discovery 13 (3) (2023)
Yi Zhang, Guanjue Xiang, Alva Yijia Jiang, Allen Lynch, Zexian Zeng, Chenfei Wang, Wubing Zhang, Jingyu Fan, Jiajinlong Kang, Shengqing Stan Gu, Changxin Wan, Boning Zhang, X Shirley Liu, Myles A Brown, Clifford A Meyer
MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment. Nature communications 14 (1) (2023)
Avinash Das Sahu, Xiao-Man Wang, Phillip Munson, Jan P G Klomp, Xiaoqing Wang, Shengqing Stan Gu, Ya Han, Gege Qian, Phillip Nicol, Zexian Zeng, Chenfei Wang, Collin J Tokheim, Wubing Zhang, Jingxin Fu, Jin Wang, Nishanth Ulhas Nair, Joost A P Rens, Meriem Bourajjaj, Bas Jansen, Inge Leenders, Jaap Lemmers, Mark Musters, Sanne van Zanten, Laura van Zelst, Jenny Worthington, Zhirui Hu, Dejan Juric, Clifford A Meyer, Arthur Oubrie, X Shirley Liu, David E Fisher, Keith T Flaherty
Discovery of Targets for Immune-Metabolic Antitumor Drugs Identifies Estrogen-Related Receptor Alpha. Cancer discovery 13 (3) (2023)
Avinash Das Sahu, Xiao-Man Wang, Phillip Munson, Jan P G Klomp, Xiaoqing Wang, Shengqing Stan Gu, Ya Han, Gege Qian, Phillip Nicol, Zexian Zeng, Chenfei Wang, Collin J Tokheim, Wubing Zhang, Jingxin Fu, Jin Wang, Nishanth Ulhas Nair, Joost A P Rens, Meriem Bourajjaj, Bas Jansen, Inge Leenders, Jaap Lemmers, Mark Musters, Sanne van Zanten, Laura van Zelst, Jenny Worthington, Zhirui Hu, Dejan Juric, Clifford A Meyer, Arthur Oubrie, X Shirley Liu, David E Fisher, Keith T Flaherty
Discovery of Targets for Immune-Metabolic Antitumor Drugs Identifies Estrogen-Related Receptor Alpha. Cancer discovery (2023)
Yi Zhang, Guanjue Xiang, Alva Yijia Jiang, Allen Lynch, Zexian Zeng, Chenfei Wang, Wubing Zhang, Jingyu Fan, Jiajinlong Kang, Shengqing Stan Gu, Changxin Wan, Boning Zhang, X Shirley Liu, Myles A Brown, Clifford A Meyer
MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment. Nature communications 14 (1) (2023)
Len Taing, Ariaki Dandawate, Sehi L' Yi, Nils Gehlenborg, Myles A Brown, Clifford A Meyer
Cistrome Data Browser: integrated search, analysis and visualization of chromatin data. Nucleic acids research (2023)
Yi Zhang, Guanjue Xiang, Alva Yijia Jiang, Allen Lynch, Zexian Zeng, Chenfei Wang, Wubing Zhang, Jingyu Fan, Jiajinlong Kang, Shengqing Stan Gu, Changxin Wan, Boning Zhang, X Shirley Liu, Myles A Brown, Clifford A Meyer
MetaTiME integrates single-cell gene expression to characterize the meta-components of the tumor immune microenvironment. Nature communications 14 (1) (2023)
Avinash Das Sahu, Xiao-Man Wang, Phillip Munson, Jan P G Klomp, Xiaoqing Wang, Shengqing Stan Gu, Ya Han, Gege Qian, Phillip Nicol, Zexian Zeng, Chenfei Wang, Collin J Tokheim, Wubing Zhang, Jingxin Fu, Jin Wang, Nishanth Ulhas Nair, Joost A P Rens, Meriem Bourajjaj, Bas Jansen, Inge Leenders, Jaap Lemmers, Mark Musters, Sanne van Zanten, Laura van Zelst, Jenny Worthington, Zhirui Hu, Dejan Juric, Clifford A Meyer, Arthur Oubrie, X Shirley Liu, David E Fisher, Keith T Flaherty
Discovery of Targets for Immune-Metabolic Antitumor Drugs Identifies Estrogen-Related Receptor Alpha. Cancer discovery 13 (3) (2023)
Allen W Lynch, Christina V Theodoris, Henry W Long, Myles A Brown, X Shirley Liu, Clifford A Meyer
MIRA: joint regulatory modeling of multimodal expression and chromatin accessibility in single cells. Nature methods 19 (9) (2022)
Sheng'en Shawn Hu, Lin Liu, Qi Li, Wenjing Ma, Michael J Guertin, Clifford A Meyer, Ke Deng, Tingting Zhang, Chongzhi Zang
Intrinsic bias estimation for improved analysis of bulk and single-cell chromatin accessibility profiles using SELMA. Nature communications 13 (1) (2022)
Qian Qin, Jingyu Fan, Rongbin Zheng, Changxin Wan, Shenglin Mei, Qiu Wu, Hanfei Sun, Myles Brown, Jing Zhang, Clifford A Meyer, X Shirley Liu
Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data. Genome biology 21 (1) (2020)

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Publication Activity (10 Years)

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Clifford A Meyer