Daniel J B Clarke

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 13

Top Topics

Gene Expression

Top Venues

Communications biology

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Daniel J B Clarke, Giacomo B Marino, Eden Z Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma'ayan
Rummagene: massive mining of gene sets from supporting materials of biomedical research publications. Communications biology 7 (1) (2024)
Giacomo B Marino, Daniel J B Clarke, Eden Z Deng, Avi Ma'ayan
RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO. bioRxiv : the preprint server for biology (2024)
Giacomo B Marino, Daniel J B Clarke, Eden Z Deng, Avi Ma'ayan
RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO. bioRxiv : the preprint server for biology (2024)
Daniel J B Clarke, Giacomo B Marino, Eden Z Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma'ayan
Rummagene: massive mining of gene sets from supporting materials of biomedical research publications. Communications biology 7 (1) (2024)
Daniel J B Clarke, Giacomo B Marino, Eden Z Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma'ayan
Rummagene: massive mining of gene sets from supporting materials of biomedical research publications. Communications biology 7 (1) (2024)
Giacomo B Marino, Daniel J B Clarke, Eden Z Deng, Avi Ma'ayan
RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO. bioRxiv : the preprint server for biology (2024)
Daniel J B Clarke, Giacomo B Marino, Eden Z Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma'ayan
Rummagene: massive mining of gene sets from supporting materials of biomedical research publications. Communications biology 7 (1) (2024)
Giacomo B Marino, Daniel J B Clarke, Eden Z Deng, Avi Ma'ayan
RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO. bioRxiv : the preprint server for biology (2024)
Daniel J B Clarke, Giacomo B Marino, Eden Z Deng, Zhuorui Xie, John Erol Evangelista, Avi Ma'ayan
Rummagene: massive mining of gene sets from supporting materials of biomedical research publications. Communications biology 7 (1) (2024)
Alexander Lachmann, Kaeli A Rizzo, Alon Bartal, Minji Jeon, Daniel J B Clarke, Avi Ma'ayan
PrismEXP: gene annotation prediction from stratified gene-gene co-expression matrices. PeerJ 11 (2023)
Alexander Lachmann, Kaeli A Rizzo, Alon Bartal, Minji Jeon, Daniel J B Clarke, Avi Ma'ayan
PrismEXP: gene annotation prediction from stratified gene-gene co-expression matrices. PeerJ 11 (2023)
John Erol Evangelista, Daniel J B Clarke, Zhuorui Xie, Giacomo B Marino, Vivian Utti, Sherry L Jenkins, Taha Mohseni Ahooyi, Cristian G Bologa, Jeremy J Yang, Jessica L Binder, Praveen Kumar, Christophe Gerard Lambert, Jeffery S Grethe, Eric Wenger, Deanne Taylor, Tudor I Oprea, Bernard de Bono, Avi Ma'ayan
Toxicology knowledge graph for structural birth defects. Communications medicine 3 (1) (2023)
Amanda L Charbonneau, Arthur Brady, Karl Czajkowski, Jain Aluvathingal, Saranya Canchi, Robert L Carter, Kyle Chard, Daniel J B Clarke, Jonathan Crabtree, Heather H Creasy, Mike D'Arcy, Victor Felix, Michelle G Giglio, Alicia A Gingrich, Rayna Michelle Harris, Theresa K Hodges, Olukemi Ifeonu, Minji Jeon, Eryk Kropiwnicki, Marisa C W Lim, R Lee Liming, Jessica Lumian, Anup A Mahurkar, Meisha Mandal, James B Munro, Suvarna Nadendla, Rudyard Richter, Cia Romano, Philippe Rocca-Serra, Michael Schor, Robert E Schuler, Hongsuda Tangmunarunkit, Alexander M Waldrop, Cris Williams, Karen Word, Susanna-Assunta Sansone, Avi Ma'ayan, Rick Wagner, Ian T Foster, Carl Kesselman, C Titus Brown, Owen White
Making Common Fund data more findable: catalyzing a data ecosystem. GigaScience 11 (2022)