Danzhou Yang

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 34

Top Topics

Dna Methylation

Metastatic Breast Cancer

Top Venues

Journal of medicinal chemistry

Journal of the American Society for Mass Spectrometry

Journal of the American Chemical Society

Molecules (Basel, Switzerland)

This page only lists publications with an associated author ORCID identifier.

Publications

Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry (2024)
Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry 35 (4) (2024)
Wenting Liu, Bo-Chen Zhu, Liu-Yi Liu, Xiao-Yu Xia, Jinho Jang, Jonathan Dickerhoff, Danzhou Yang, Zong-Wan Mao
Solution structures and effects of a platinum compound successively bound MYC G-quadruplex. Nucleic acids research (2024)
Yichen Han, Adam Buric, Venkat Chintareddy, Mercedes DeMoss, Luying Chen, Jonathan Dickerhoff, Robyn De Dios, Pooran Chand, Randall Riggs, Danzhou Yang, Mark Cushman
Design, Synthesis, and Investigation of the Pharmacokinetics and Anticancer Activities of Indenoisoquinoline Derivatives That Stabilize the G-Quadruplex in the MYC Promoter and Inhibit Topoisomerase I. Journal of medicinal chemistry (2024)
Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry 35 (4) (2024)
Yichen Han, Adam Buric, Venkat Chintareddy, Mercedes DeMoss, Luying Chen, Jonathan Dickerhoff, Robyn De Dios, Pooran Chand, Randall Riggs, Danzhou Yang, Mark Cushman
Design, Synthesis, and Investigation of the Pharmacokinetics and Anticancer Activities of Indenoisoquinoline Derivatives That Stabilize the G-Quadruplex in the MYC Promoter and Inhibit Topoisomerase I. Journal of medicinal chemistry 67 (9) (2024)
Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry 35 (4) (2024)
Yichen Han, Adam Buric, Venkat Chintareddy, Mercedes DeMoss, Luying Chen, Jonathan Dickerhoff, Robyn De Dios, Pooran Chand, Randall Riggs, Danzhou Yang, Mark Cushman
Design, Synthesis, and Investigation of the Pharmacokinetics and Anticancer Activities of Indenoisoquinoline Derivatives That Stabilize the G-Quadruplex in the MYC Promoter and Inhibit Topoisomerase I. Journal of medicinal chemistry 67 (9) (2024)
Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry 35 (4) (2024)
Hang Lin, Muhammad Hassan Safdar, Sarah Washburn, Saeed S Akhand, Jonathan Dickerhoff, Mitchell Ayers, Marvis Monteiro, Luis Solorio, Danzhou Yang, Michael K Wendt
Fibroblast growth receptor 1 is regulated by G-quadruplex in metastatic breast cancer. Communications biology 7 (1) (2024)
Hang Lin, Muhammad Hassan Safdar, Sarah Washburn, Saeed S Akhand, Jonathan Dickerhoff, Mitchell Ayers, Marvis Monteiro, Luis Solorio, Danzhou Yang, Michael K Wendt
Fibroblast growth receptor 1 is regulated by G-quadruplex in metastatic breast cancer. Communications biology 7 (1) (2024)
Yichen Han, Adam Buric, Venkat Chintareddy, Mercedes DeMoss, Luying Chen, Jonathan Dickerhoff, Robyn De Dios, Pooran Chand, Randall Riggs, Danzhou Yang, Mark Cushman
Design, Synthesis, and Investigation of the Pharmacokinetics and Anticancer Activities of Indenoisoquinoline Derivatives That Stabilize the G-Quadruplex in the MYC Promoter and Inhibit Topoisomerase I. Journal of medicinal chemistry 67 (9) (2024)
Yichen Han, Adam Buric, Venkat Chintareddy, Mercedes DeMoss, Luying Chen, Jonathan Dickerhoff, Robyn De Dios, Pooran Chand, Randall Riggs, Danzhou Yang, Mark Cushman
Design, Synthesis, and Investigation of the Pharmacokinetics and Anticancer Activities of Indenoisoquinoline Derivatives That Stabilize the G-Quadruplex in the MYC Promoter and Inhibit Topoisomerase I. Journal of medicinal chemistry 67 (9) (2024)
Hang Lin, Muhammad Hassan Safdar, Sarah Washburn, Saeed S Akhand, Jonathan Dickerhoff, Mitchell Ayers, Marvis Monteiro, Luis Solorio, Danzhou Yang, Michael K Wendt
Fibroblast growth receptor 1 is regulated by G-quadruplex in metastatic breast cancer. Communications biology 7 (1) (2024)
Nicole M Brundridge, Jordan M Fritz, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Negative Electron Transfer Collision-Induced Dissociation of G-Quadruplexes: Uncovering the Guanine Radical Anion Loss Pathway. Journal of the American Society for Mass Spectrometry 35 (4) (2024)
Hang Lin, Muhammad Hassan Safdar, Sarah Washburn, Saeed S Akhand, Jonathan Dickerhoff, Mitchell Ayers, Marvis Monteiro, Luis Solorio, Danzhou Yang, Michael K Wendt
Fibroblast growth receptor 1 is regulated by G-quadruplex in metastatic breast cancer. Communications biology 7 (1) (2024)
Nicole M Brundridge, Jonathan Dickerhoff, Danzhou Yang, Scott A McLuckey
Gas-Phase Fragmentation as a Probe of G-Quadruplex Formation. Analytical chemistry (2023)
Kai-Bo Wang, Yushuang Liu, Yipu Li, Jonathan Dickerhoff, Jinzhu Li, Ming-Hua Yang, Danzhou Yang, Ling-Yi Kong
Oxidative Damage Induces a Vacancy G-Quadruplex That Binds Guanine Metabolites: Solution Structure of a cGMP Fill-in Vacancy G-Quadruplex in the Oxidized BLM Gene Promoter. Journal of the American Chemical Society 144 (14) (2022)
Saburo Sakai, Taiga Otsuka, Shinichi Matsuda, Yoshiyuki Sakairi, Ryoma Uchida, Kazunori Sugahara, Akihiro Kano, Danzhou Yang
Subnanomolar Sensitive Stable Isotopic Determination in CO 2 by Tunable Infrared Laser Absorption Spectroscopy. Analytical chemistry 94 (17) (2022)
Luying Chen, Jonathan Dickerhoff, Saburo Sakai, Danzhou Yang
DNA G-Quadruplex in Human Telomeres and Oncogene Promoters: Structures, Functions, and Small Molecule Targeting. Accounts of chemical research 55 (18) (2022)
Jonathan Dickerhoff, Jixun Dai, Danzhou Yang
Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes. Nucleic acids research 49 (10) (2021)
Jonathan Dickerhoff, Nicole Brundridge, Scott A McLuckey, Danzhou Yang
Berberine Molecular Recognition of the Parallel MYC G-Quadruplex in Solution. Journal of medicinal chemistry 64 (21) (2021)
Jiazeng Sun, Guanhui Wu, Florentin Pastor, Naimur Rahman, Wen-Hung Wang, Zhengtao Zhang, Philippe Merle, Lijian Hui, Anna Salvetti, David Durantel, Danzhou Yang, Ourania M Andrisani
RNA helicase DDX5 enables STAT1 mRNA translation and interferon signalling in hepatitis B virus replicating hepatocytes. Gut (2021)
Kai-Bo Wang, Jonathan Dickerhoff, Danzhou Yang
Solution Structure of Ternary Complex of Berberine Bound to a dGMP-Fill-In Vacancy G-Quadruplex Formed in the PDGFR-β Promoter. Journal of the American Chemical Society 143 (40) (2021)
Jonathan Dickerhoff, Kassandra R Warnecke, Kaibo Wang, Nanjie Deng, Danzhou Yang
Evaluating Molecular Docking Software for Small Molecule Binding to G-Quadruplex DNA. International journal of molecular sciences 22 (19) (2021)
Adam J Buric, Jonathan Dickerhoff, Danzhou Yang
Novel DNA Bis-Intercalator XR5944 as a Potent Anticancer Drug-Design and Mechanism of Action. Molecules (Basel, Switzerland) 26 (14) (2021)
Sreejana Ray, Desiree Tilo, Robert E Boer, Nima Assad, Mira Barshai, Guanhui Wu, Yaron Orenstein, Danzhou Yang, John S Schneekloth, Charles Vinson
Custom DNA Microarrays Reveal Diverse Binding Preferences of Proteins and Small Molecules to Thousands of G-Quadruplexes. ACS chemical biology 15 (4) (2020)
Guanhui Wu, Desiree Tilo, Sreejana Ray, Ta-Chau Chang, John S Schneekloth, Charles Vinson, Danzhou Yang
Custom G4 Microarrays Reveal Selective G-Quadruplex Recognition of Small Molecule BMVC: A Large-Scale Assessment of Ligand Binding Selectivity. Molecules (Basel, Switzerland) 25 (15) (2020)
Kai-Bo Wang, Jonathan Dickerhoff, Guanhui Wu, Danzhou Yang
PDGFR-β Promoter Forms a Vacancy G-Quadruplex that Can Be Filled in by dGMP: Solution Structure and Molecular Recognition of Guanine Metabolites and Drugs. Journal of the American Chemical Society 142 (11) (2020)
Jeffrey Cruz, Lauren Wickstrom, Danzhou Yang, Emilio Gallicchio, Nanjie Deng
Combining Alchemical Transformation with a Physical Pathway to Accelerate Absolute Binding Free Energy Calculations of Charged Ligands to Enclosed Binding Sites. Journal of chemical theory and computation 16 (4) (2020)
Nanjie Deng, Junchao Xia, Lauren Wickstrom, Clement Lin, Kaibo Wang, Peng He, Yunting Yin, Danzhou Yang
Ligand Selectivity in the Recognition of Protoberberine Alkaloids by Hybrid-2 Human Telomeric G-Quadruplex: Binding Free Energy Calculation, Fluorescence Binding, and NMR Experiments. Molecules (Basel, Switzerland) 24 (8) (2019)
Guanhui Wu, Luying Chen, Wenting Liu, Danzhou Yang
Molecular Recognition of the Hybrid-Type G-Quadruplexes in Human Telomeres. Molecules (Basel, Switzerland) 24 (8) (2019)
Kai-Bo Wang, Mohamed S A Elsayed, Guanhui Wu, Nanjie Deng, Mark Cushman, Danzhou Yang
Indenoisoquinoline Topoisomerase Inhibitors Strongly Bind and Stabilize the MYC Promoter G-Quadruplex and Downregulate MYC. Journal of the American Chemical Society 141 (28) (2019)
Clement Lin, Guanhui Wu, Kaibo Wang, Buket Onel, Saburo Sakai, Yong Shao, Danzhou Yang
Molecular Recognition of the Hybrid-2 Human Telomeric G-Quadruplex by Epiberberine: Insights into Conversion of Telomeric G-Quadruplex Structures. Angewandte Chemie (International ed. in English) 57 (34) (2018)