Darin R Rokyta (Darin Rokyta)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 31

Top Topics

Escherichia Coli

Transcription Factor

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Journal of molecular evolution

This page only lists publications with an associated author ORCID identifier.

Publications

Pedro Gabriel Nachtigall, Alan M Durham, Darin R Rokyta, Inácio Junqueira de Azevedo
ToxCodAn-Genome: an automated pipeline for toxin-gene annotation in genome assembly of venomous lineages. GigaScience 13 (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Uthpala Chandrasekara, Emilie M Broussard, Darin R Rokyta, Bryan Grieg Fry
High-Voltage Toxin'Roll: Electrostatic Charge Repulsion as a Dynamic Venom Resistance Trait in Pythonid Snakes. Toxins 16 (4) (2024)
Schyler A Ellsworth, Rhett M Rautsaw, Micaiah J Ward, Matthew L Holding, Darin R Rokyta
Selection Across the Three-Dimensional Structure of Venom Proteins from North American Scolopendromorph Centipedes. Journal of molecular evolution 92 (4) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Uthpala Chandrasekara, Emilie M Broussard, Darin R Rokyta, Bryan Grieg Fry
High-Voltage Toxin'Roll: Electrostatic Charge Repulsion as a Dynamic Venom Resistance Trait in Pythonid Snakes. Toxins 16 (4) (2024)
Uthpala Chandrasekara, Emilie M Broussard, Darin R Rokyta, Bryan Grieg Fry
High-Voltage Toxin'Roll: Electrostatic Charge Repulsion as a Dynamic Venom Resistance Trait in Pythonid Snakes. Toxins 16 (4) (2024)
Pedro Gabriel Nachtigall, Alan M Durham, Darin R Rokyta, Inácio Junqueira de Azevedo
ToxCodAn-Genome: an automated pipeline for toxin-gene annotation in genome assembly of venomous lineages. GigaScience 13 (2024)
Schyler A Ellsworth, Rhett M Rautsaw, Micaiah J Ward, Matthew L Holding, Darin R Rokyta
Selection Across the Three-Dimensional Structure of Venom Proteins from North American Scolopendromorph Centipedes. Journal of molecular evolution (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Gunnar S Nystrom, Schyler A Ellsworth, Micaiah J Ward, Darin R Rokyta
Varying Modes of Selection Among Toxin Families in the Venoms of the Giant Desert Hairy Scorpions (Hadrurus). Journal of molecular evolution (2023)
Edward A Myers, Jason L Strickland, Rhett M Rautsaw, Andrew J Mason, Tristan D Schramer, Gunnar S Nystrom, Michael P Hogan, Shibu Yooseph, Darin R Rokyta, Christopher L Parkinson
De Novo Genome Assembly Highlights the Role of Lineage-Specific Gene Duplications in the Evolution of Venom in Fea's Viper (Azemiops feae). Genome biology and evolution 14 (7) (2022)
Matthew L Holding, Vivian C Trevine, Oleksandr I Zinenko, Jason L Strickland, Rhett M Rautsaw, Andrew J Mason, Michael P Hogan, Christopher L Parkinson, Felipe Gobbi Grazziotin, Sharlene E Santana, Mark A Davis, Darin R Rokyta
Evolutionary allometry and ecological correlates of fang length evolution in vipers. Proceedings. Biological sciences 289 (1982) (2022)
Andrew J Mason, Matthew L Holding, Rhett M Rautsaw, Darin R Rokyta, Christopher L Parkinson, H Lisle Gibbs
Venom Gene Sequence Diversity and Expression Jointly Shape Diet Adaptation in Pitvipers. Molecular biology and evolution 39 (4) (2022)
Tarek Mohamed Abd El-Aziz, Yucheng Xiao, Jake T Kline, Harold Gridley, Alyse Heaston, Klaus D Linse, Micaiah J Ward, Darin R Rokyta, James D Stockand, Theodore R Cummins, Luca Fornelli, Ashlee H Rowe
Identification and Characterization of Novel Proteins from Arizona Bark Scorpion Venom That Inhibit Nav1.8, a Voltage-Gated Sodium Channel Regulator of Pain Signaling. Toxins 13 (7) (2021)
Michael P Hogan, A Carl Whittington, Michael B Broe, Micaiah J Ward, H Lisle Gibbs, Darin R Rokyta
The Chemosensory Repertoire of the Eastern Diamondback Rattlesnake (Crotalus adamanteus) Reveals Complementary Genetics of Olfactory and Vomeronasal-Type Receptors. Journal of molecular evolution 89 (4-5) (2021)
Mark J Margres, Rhett M Rautsaw, Jason L Strickland, Andrew J Mason, Tristan D Schramer, Erich P Hofmann, Erin Stiers, Schyler A Ellsworth, Gunnar S Nystrom, Michael P Hogan, Daniel A Bartlett, Timothy J Colston, David M Gilbert, Darin R Rokyta, Christopher L Parkinson
The Tiger Rattlesnake genome reveals a complex genotype underlying a simple venom phenotype. Proceedings of the National Academy of Sciences of the United States of America 118 (4) (2021)
Mark J Margres, Kenneth P Wray, Dragana Sanader, Preston J McDonald, Lauren M Trumbull, Austin H Patton, Darin R Rokyta
Varying Intensities of Introgression Obscure Incipient Venom-Associated Speciation in the Timber Rattlesnake (Crotalus horridus). Toxins 13 (11) (2021)
Matthew L Holding, Jason L Strickland, Rhett M Rautsaw, Erich P Hofmann, Andrew J Mason, Michael P Hogan, Gunnar S Nystrom, Schyler A Ellsworth, Timothy J Colston, Miguel Borja, Gamaliel Castañeda-Gaytán, Christoph I Grünwald, Jason M Jones, Luciana Aparecida Freitas-de-Sousa, Vincent Louis Viala, Mark J Margres, Erika Hingst-Zaher, Inácio Junqueira de Azevedo, Ana Maria Moura-da-Silva, Felipe Gobbi Grazziotin, H Lisle Gibbs, Darin R Rokyta, Christopher L Parkinson
Phylogenetically diverse diets favor more complex venoms in North American pitvipers. Proceedings of the National Academy of Sciences of the United States of America 118 (17) (2021)
Daniel Dashevsky, Darin R Rokyta, Nathaniel Frank, Amanda Nouwens, Bryan Grieg Fry
Electric Blue: Molecular Evolution of Three-Finger Toxins in the Long-Glanded Coral Snake Species Calliophis bivirgatus. Toxins 13 (2) (2021)
Alexander Ochoa, Michael Broe, Emily Moriarty Lemmon, Alan R Lemmon, Darin R Rokyta, H Lisle Gibbs
Drift, selection and adaptive variation in small populations of a threatened rattlesnake. Molecular ecology 29 (14) (2020)
Richard B Schonour, Emma M Huff, Matthew L Holding, Natalie M Claunch, Schyler A Ellsworth, Michael P Hogan, Kenneth Wray, James McGivern, Mark J Margres, Timothy J Colston, Darin R Rokyta
Gradual and Discrete Ontogenetic Shifts in Rattlesnake Venom Composition and Assessment of Hormonal and Ecological Correlates. Toxins 12 (10) (2020)
Luciana Aparecida Freitas-de-Sousa, Pedro Gabriel Nachtigall, José A Portes-Junior, Matthew L Holding, Gunnar S Nystrom, Schyler A Ellsworth, Noranathan C Guimarães, Emilly Tioyama, Flora Ortiz, Bruno R Silva, Tobias S Kunz, Inácio L M Junqueira-de-Azevedo, Felipe Gobbi Grazziotin, Darin R Rokyta, Ana Maria Moura-da-Silva
Size Matters: An Evaluation of the Molecular Basis of Ontogenetic Modifications in the Composition of Bothrops jararacussu Snake Venom. Toxins 12 (12) (2020)
Matthew L Holding, Mark J Margres, Andrew J Mason, Christopher L Parkinson, Darin R Rokyta
Evaluating the Performance of De Novo Assembly Methods for Venom-Gland Transcriptomics. Toxins 10 (6) (2018)
Jason L Strickland, Cara F Smith, Andrew J Mason, Drew R Schield, Miguel Borja, Gamaliel Castañeda-Gaytán, Carol L Spencer, Lydia L Smith, Ann Trápaga, Nassima M Bouzid, Gustavo Campillo-García, Oscar A Flores-Villela, Daniel Antonio-Rangel, Stephen P Mackessy, Todd A Castoe, Darin R Rokyta, Christopher L Parkinson
Evidence for divergent patterns of local selection driving venom variation in Mojave Rattlesnakes (Crotalus scutulatus). Scientific reports 8 (1) (2018)
Jason L Strickland, Andrew J Mason, Darin R Rokyta, Christopher L Parkinson
Phenotypic Variation in Mojave Rattlesnake (Crotalus scutulatus) Venom Is Driven by Four Toxin Families. Toxins 10 (4) (2018)