Matthew L Holding (Matthew Holding)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 27

Top Topics

Dna Methylation

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Systematic biology

Proceedings. Biological sciences

This page only lists publications with an associated author ORCID identifier.

Publications

Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Edward A Myers, Rhett M Rautsaw, Miguel Borja, Jason Jones, Christoph I Grünwald, Matthew L Holding, Felipe Grazziotin, Christopher L Parkinson
Phylogenomic discordance is driven by wide-spread introgression and incomplete lineage sorting during rapid species diversification within rattlesnakes (Viperidae: Crotalus and Sistrurus). Systematic biology (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Edward A Myers, Rhett M Rautsaw, Miguel Borja, Jason Jones, Christoph I Grünwald, Matthew L Holding, Felipe Grazziotin, Christopher L Parkinson
Phylogenomic discordance is driven by wide-spread introgression and incomplete lineage sorting during rapid species diversification within rattlesnakes (Viperidae: Crotalus and Sistrurus). Systematic biology (2024)
Edward A Myers, Rhett M Rautsaw, Miguel Borja, Jason Jones, Christoph I Grünwald, Matthew L Holding, Felipe Grazziotin, Christopher L Parkinson
Phylogenomic discordance is driven by wide-spread introgression and incomplete lineage sorting during rapid species diversification within rattlesnakes (Viperidae: Crotalus and Sistrurus). Systematic biology (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Michael P Hogan, Matthew L Holding, Gunnar S Nystrom, Timothy J Colston, Daniel A Bartlett, Andrew J Mason, Schyler A Ellsworth, Rhett M Rautsaw, Kylie C Lawrence, Jason L Strickland, Bing He, Peter Fraser, Mark J Margres, David M Gilbert, H Lisle Gibbs, Christopher L Parkinson, Darin R Rokyta
The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom. Proceedings of the National Academy of Sciences of the United States of America 121 (16) (2024)
Erin P Westeen, Merly Escalona, Matthew L Holding, Eric Beraut, Colin Fairbairn, Mohan P A Marimuthu, Oanh Nguyen, Ralph Perri, Robert N Fisher, Erin Toffelmier, H Bradley Shaffer, Ian J Wang
A genome assembly for the southern Pacific rattlesnake, Crotalus oreganus helleri, in the western rattlesnake species complex. The Journal of heredity (2023)
Alexander Ochoa, Alyssa T B Hassinger, Matthew L Holding, H Lisle Gibbs
Genetic characterization of potential venom resistance proteins in California ground squirrels (Otospermophilus beecheyi) using transcriptome analyses. Journal of experimental zoology. Part B, Molecular and developmental evolution (2022)
Robert Greenhalgh, Matthew L Holding, Teri J Orr, James B Henderson, Thomas Lee Parchman, Marjorie D Matocq, Michael D Shapiro, M Denise Dearing
Trio-binned genomes of the woodrats Neotoma bryanti and Neotoma lepida reveal novel gene islands and rapid copy number evolution of xenobiotic metabolizing genes. Molecular ecology resources 22 (7) (2022)
Matthew L Holding, Vivian C Trevine, Oleksandr I Zinenko, Jason L Strickland, Rhett M Rautsaw, Andrew J Mason, Michael P Hogan, Christopher L Parkinson, Felipe Gobbi Grazziotin, Sharlene E Santana, Mark A Davis, Darin R Rokyta
Evolutionary allometry and ecological correlates of fang length evolution in vipers. Proceedings. Biological sciences 289 (1982) (2022)
Andrew J Mason, Matthew L Holding, Rhett M Rautsaw, Darin R Rokyta, Christopher L Parkinson, H Lisle Gibbs
Venom Gene Sequence Diversity and Expression Jointly Shape Diet Adaptation in Pitvipers. Molecular biology and evolution 39 (4) (2022)
Leijiane F de Sousa, Matthew L Holding, Tiago H M Del-Rei, Marisa M T Rocha, Rosa Helena V Mourão, Hipócrates de Menezes Chalkidis, Benedito C Prezoto, H Lisle Gibbs, Ana Maria Moura-da-Silva
Individual Variability in Bothropsatrox Snakes Collected from Different Habitats in the Brazilian Amazon: New Findings on Venom Composition and Functionality. Toxins 13 (11) (2021)
Matthew L Holding, Jason L Strickland, Rhett M Rautsaw, Erich P Hofmann, Andrew J Mason, Michael P Hogan, Gunnar S Nystrom, Schyler A Ellsworth, Timothy J Colston, Miguel Borja, Gamaliel Castañeda-Gaytán, Christoph I Grünwald, Jason M Jones, Luciana Aparecida Freitas-de-Sousa, Vincent Louis Viala, Mark J Margres, Erika Hingst-Zaher, Inácio Junqueira de Azevedo, Ana Maria Moura-da-Silva, Felipe Gobbi Grazziotin, H Lisle Gibbs, Darin R Rokyta, Christopher L Parkinson
Phylogenetically diverse diets favor more complex venoms in North American pitvipers. Proceedings of the National Academy of Sciences of the United States of America 118 (17) (2021)
Kelly E Robinson, Matthew L Holding, Malachi D Whitford, Anthony J Saviola, John Yates Iii, Rulon W Clark
Phenotypic and functional variation in venom and venom resistance of two sympatric rattlesnakes and their prey. Journal of evolutionary biology 34 (9) (2021)
Richard B Schonour, Emma M Huff, Matthew L Holding, Natalie M Claunch, Schyler A Ellsworth, Michael P Hogan, Kenneth Wray, James McGivern, Mark J Margres, Timothy J Colston, Darin R Rokyta
Gradual and Discrete Ontogenetic Shifts in Rattlesnake Venom Composition and Assessment of Hormonal and Ecological Correlates. Toxins 12 (10) (2020)
Luciana Aparecida Freitas-de-Sousa, Pedro Gabriel Nachtigall, José A Portes-Junior, Matthew L Holding, Gunnar S Nystrom, Schyler A Ellsworth, Noranathan C Guimarães, Emilly Tioyama, Flora Ortiz, Bruno R Silva, Tobias S Kunz, Inácio L M Junqueira-de-Azevedo, Felipe Gobbi Grazziotin, Darin R Rokyta, Ana Maria Moura-da-Silva
Size Matters: An Evaluation of the Molecular Basis of Ontogenetic Modifications in the Composition of Bothrops jararacussu Snake Venom. Toxins 12 (12) (2020)
H Lisle Gibbs, Libia Sanz, Alicia Pérez, Alexander Ochoa, Alyssa T B Hassinger, Matthew L Holding, Juan J Calvete
The molecular basis of venom resistance in a rattlesnake-squirrel predator-prey system. Molecular ecology 29 (15) (2020)
Matthew L Holding, Breanna J Putman, Lauren M Kong, Jennifer E Smith, Rulon W Clark
Physiological Stress Integrates Resistance to Rattlesnake Venom and the Onset of Risky Foraging in California Ground Squirrels. Toxins 12 (10) (2020)
Scott M Goetz, Sara Piccolomini, Michelle Hoffman, James Bogan, Matthew L Holding, Mary T Mendonça, David A Steen
Serum-based inhibition of pitviper venom by eastern indigo snakes (Drymarchon couperi). Biology open 8 (3) (2019)
Erich P Hofmann, Rhett M Rautsaw, Jason L Strickland, Matthew L Holding, Michael P Hogan, Andrew J Mason, Darin R Rokyta, Christopher L Parkinson
Comparative venom-gland transcriptomics and venom proteomics of four Sidewinder Rattlesnake (Crotalus cerastes) lineages reveal little differential expression despite individual variation. Scientific reports 8 (1) (2018)
Matthew L Holding, Mark J Margres, Darin R Rokyta, H Lisle Gibbs
Local prey community composition and genetic distance predict venom divergence among populations of the northern Pacific rattlesnake (Crotalus oreganus). Journal of evolutionary biology 31 (10) (2018)
Matthew L Holding, James E Biardi, H Lisle Gibbs
Coevolution of venom function and venom resistance in a rattlesnake predator and its squirrel prey. Proceedings. Biological sciences 283 (1829) (2017)