David J Beebe (David Beebe)

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 42

Top Topics

Prostate Cancer

Extracellular Matrix

Candida Albicans

Top Venues

bioRxiv : the preprint server for biology

Nature communications

Journal of cell science

Science advances

This page only lists publications with an associated author ORCID identifier.

Publications

Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Qiyuan Chen, Hang Zhai, David J Beebe, Chao Li, Bu Wang
Visualization-enhanced under-oil open microfluidic system for in situ characterization of multi-phase chemical reactions. Nature communications 15 (1) (2024)
Shruthi Magesh, Jonathan H Schrope, Nayanna M Mercado Soto, Chao Li, Amanda I Hurley, Anna Huttenlocher, David J Beebe, Jo Handelsman
Co-zorbs: Motile, multispecies biofilms aid transport of diverse bacterial species. bioRxiv : the preprint server for biology (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science (2024)
Qiyuan Chen, Hang Zhai, David J Beebe, Chao Li, Bu Wang
Visualization-enhanced under-oil open microfluidic system for in situ characterization of multi-phase chemical reactions. Nature communications 15 (1) (2024)
Duane S Juang, Wren E Wightman, Gabriel L Lozano, Terry D Juang, Layla J Barkal, Jiaquan Yu, Manuel F Garavito, Amanda I Hurley, Ophelia S Venturelli, Jo Handelsman, David J Beebe
Microbial community interactions on a chip. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Ashley Peterson, David Bennin, Michael R Lasarev, Julia Chini, David J Beebe, Anna Huttenlocher
Neutrophil motility is regulated by both cell intrinsic and endothelial cell ARPC1B. Journal of cell science 137 (3) (2024)
Qiyuan Chen, Hang Zhai, David J Beebe, Chao Li, Bu Wang
Visualization-enhanced under-oil open microfluidic system for in situ characterization of multi-phase chemical reactions. Nature communications 15 (1) (2024)
Jonathan H Schrope, Adam Horn, Mehtab Farooqui, Kaitlyn Lazorchak, Jiayi Li, Clyde Tinnen, Jack J Stevens, David Bennin, Tanner Ford Robertson, Terry Juang, Chao Li, Anna Huttenlocher, David J Beebe
Liquid-liquid interfaces enable tunable cell confinement to recapitulate surrounding tissue deformations during neutrophil interstitial migration in vivo . bioRxiv : the preprint server for biology (2023)
Sara Abizanda-Campo, María Virumbrales-Muñoz, Mouhita Humayun, Inés Mármol, David J Beebe, Ignacio Ochoa, Sara Oliván, Jose Maria Ayuso Dominguez
Microphysiological systems for solid tumor immunotherapy: opportunities and challenges. Microsystems & nanoengineering 9 (2023)
Cristina Sanchez-de-Diego, María Virumbrales-Muñoz, Brock Hermes, Terry D Juang, Duane S Juang, Jeremiah M Riendeau, Emmanuel Contreras Guzman, Catherine A Reed-McBain, Sara Abizanda-Campo, Janmesh Patel, Nicholas J Hess, Melissa C Skala, David J Beebe, Jose Maria Ayuso Dominguez
Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications. Communications biology 6 (1) (2023)
Leonardo R Nunn, Terry D Juang, David J Beebe, Nicolas J Wheeler, Mostafa Zamanian
A high-throughput nematode sensory assay reveals an inhibitory effect of ivermectin on parasite gustation. bioRxiv : the preprint server for biology (2023)
Jose Maria Ayuso Dominguez, Mehtab Farooqui, María Virumbrales-Muñoz, Katheryn Denecke, Shujah Rehman, Rebecca Schmitz, Jorge F Guerrero, Cristina Sanchez-de-Diego, Sara Abizanda Campo, Elizabeth M Maly, Matthew H Forsberg, Sheena C Kerr, Robert Striker, Nathan M Sherer, Paul M Harari, Christian M Capitini, Melissa C Skala, David J Beebe
Author Correction: Microphysiological model reveals the promise of memory-like natural killer cell immunotherapy for HIV ± cancer. Nature communications 14 (1) (2023)
Leonardo R Nunn, Terry D Juang, David J Beebe, Nicolas J Wheeler, Mostafa Zamanian
A high-throughput sensory assay for parasitic and free-living nematodes. Integrative biology : quantitative biosciences from nano to macro 15 (2023)
Sara Abizanda-Campo, María Virumbrales-Muñoz, Mouhita Humayun, Inés Mármol, David J Beebe, Ignacio Ochoa, Sara Oliván, Jose Maria Ayuso Dominguez
Microphysiological systems for solid tumor immunotherapy: opportunities and challenges. Microsystems & nanoengineering 9 (2023)
Chao Li, Nathan W Hendrikse, Makenna Mai, Zach Argall-Knapp, Jun Sung Kim, Mehtab A Farooqui, Emily A Wheat, Terry Juang, Anna Huttenlocher, David J Beebe
In vitro neutrophil functional assay in microliter whole blood for days-long extraction of donor-specific information. medRxiv : the preprint server for health sciences (2023)
Jonathan H Schrope, Adam Horn, Mehtab Farooqui, Kaitlyn Lazorchak, Jiayi Li, Clyde Tinnen, Jack J Stevens, David Bennin, Tanner Ford Robertson, Terry Juang, Chao Li, Anna Huttenlocher, David J Beebe
Liquid-liquid interfaces enable tunable cell confinement to recapitulate surrounding tissue deformations during neutrophil interstitial migration in vivo . bioRxiv : the preprint server for biology (2023)
Leonardo R Nunn, Terry D Juang, David J Beebe, Nicolas J Wheeler, Mostafa Zamanian
A high-throughput nematode sensory assay reveals an inhibitory effect of ivermectin on parasite gustation. bioRxiv : the preprint server for biology (2023)
Sara Abizanda-Campo, María Virumbrales-Muñoz, Mouhita Humayun, Inés Mármol, David J Beebe, Ignacio Ochoa, Sara Oliván, Jose Maria Ayuso Dominguez
Microphysiological systems for solid tumor immunotherapy: opportunities and challenges. Microsystems & nanoengineering 9 (2023)
Leonardo R Nunn, Terry D Juang, David J Beebe, Nicolas J Wheeler, Mostafa Zamanian
A high-throughput nematode sensory assay reveals an inhibitory effect of ivermectin on parasite gustation. bioRxiv : the preprint server for biology (2023)
Kehinde Adebayo Babatunde, Rupsa Datta, Jose Maria Ayuso Dominguez, Anna Huttenlocher, Melissa C Skala, David J Beebe, Sheena C Kerr
Naive primary neutrophils play a dual role in the tumor microenvironment. bioRxiv : the preprint server for biology (2023)
Jose Maria Ayuso Dominguez, Mehtab Farooqui, María Virumbrales-Muñoz, Katheryn Denecke, Shujah Rehman, Rebecca Schmitz, Jorge F Guerrero, Cristina Sanchez-de-Diego, Sara Abizanda Campo, Elizabeth M Maly, Matthew H Forsberg, Sheena C Kerr, Robert Striker, Nathan M Sherer, Paul Harari, Christian M Capitini, Melissa C Skala, David J Beebe
Microphysiological model reveals the promise of memory-like natural killer cell immunotherapy for HIV ± cancer. Nature communications 14 (1) (2023)
Nai-Wen Liang, Carole L Wilson, Brooke Davis, Ian Wolf, Tonela Qyli, Joy Moy, David J Beebe, Lynn M Schnapp, Sheena C Kerr, Hilary E Faust
Modeling Sepsis-Associated ARDS Using a Lung Endothelial Microphysiological System. bioRxiv : the preprint server for biology (2023)
Jonathan H Schrope, Adam Horn, Mehtab Farooqui, Kaitlyn Lazorchak, Jiayi Li, Clyde Tinnen, Jack J Stevens, David Bennin, Tanner Ford Robertson, Terry Juang, Chao Li, Anna Huttenlocher, David J Beebe
Liquid-liquid interfaces enable tunable cell confinement to recapitulate surrounding tissue deformations during neutrophil interstitial migration in vivo . bioRxiv : the preprint server for biology (2023)
Leonardo R Nunn, Terry D Juang, David J Beebe, Nicolas J Wheeler, Mostafa Zamanian
A high-throughput nematode sensory assay reveals an inhibitory effect of ivermectin on parasite gustation. bioRxiv : the preprint server for biology (2023)
Jose M Ayuso, María Virumbrales-Muñoz, Joshua M Lang, David J Beebe
A role for microfluidic systems in precision medicine. Nature communications 13 (1) (2022)
Mouhita Humayun, Jose Maria Ayuso Dominguez, Keon Young Park, Bruno Martorelli Di Genova, Melissa C Skala, Sheena C Kerr, Laura J Knoll, David J Beebe
Innate immune cell response to host-parasite interaction in a human intestinal tissue microphysiological system. Science advances 8 (18) (2022)
Ross A Vitek, Wei Huang, Peter G Geiger, Erika Heninger, Joshua M Lang, David F Jarrard, David J Beebe, Brian P Johnson
Fresh tissue procurement and preparation for multicompartment and multimodal analysis of the prostate tumor microenvironment. The Prostate 82 (7) (2022)
Tamara S Rodems, Erika Heninger, Charlotte N Stahlfeld, Cole S Gilsdorf, Kristin N Carlson, Madison R Kircher, Anupama Singh, Timothy E G Krueger, David J Beebe, David F Jarrard, Douglas G McNeel, Michael C Haffner, Joshua M Lang
Reversible epigenetic alterations regulate class I HLA loss in prostate cancer. Communications biology 5 (1) (2022)
Chao Li, Amanda Hurley, Wei Hu, Jay W Warrick, Gabriel L Lozano, Jose M Ayuso, Wenxiao Pan, Jo Handelsman, David J Beebe
Social motility of biofilm-like microcolonies in a gliding bacterium. Nature communications 12 (1) (2021)
Jose Maria Ayuso Dominguez, Keon-Young Park, María Virumbrales-Muñoz, David J Beebe
Toward improved in vitro models of human cancer. APL bioengineering 5 (1) (2021)
Duane S Juang, Terry D Juang, Dawn M Dudley, Christina M Newman, Molly A Accola, William M Rehrauer, Thomas C Friedrich, David H O'Connor, David J Beebe
Oil immersed lossless total analysis system for integrated RNA extraction and detection of SARS-CoV-2. Nature communications 12 (1) (2021)
Jose Maria Ayuso Dominguez, Shujah Rehman, María Virumbrales-Muñoz, Patrick H McMinn, Peter Geiger, Cate Fitzgerald, Tiffany Heaster, Melissa C Skala, David J Beebe
Microfluidic tumor-on-a-chip model to evaluate the role of tumor environmental stress on NK cell exhaustion. Science advances 7 (8) (2021)
Chao Li, Zachary Hite, Jay W Warrick, Jiayi Li, Stephanie H Geller, Victoria G Trantow, Megan N McClean, David J Beebe
Under oil open-channel microfluidics empowered by exclusive liquid repellency. Science advances 6 (16) (2020)
Mengyao Niu, Breanne N Steffan, Gregory J Fischer, Nandhitha Venkatesh, Nicholas L Raffa, Molly A Wettstein, Jin Woo Bok, Claudio Greco, Can Zhao, Erwin Berthier, Ernst Oliw, David J Beebe, Michael J Bromley, Nancy P Keller
Fungal oxylipins direct programmed developmental switches in filamentous fungi. Nature communications 11 (1) (2020)
Jiaquan Yu, Erwin Berthier, Alexandria Craig, Theodorus E de Groot, Sidney Sparks, Patrick N Ingram, David F Jarrard, Wei Huang, David J Beebe, Ashleigh B Theberge
Reconfigurable open microfluidics for studying the spatiotemporal dynamics of paracrine signalling. Nature biomedical engineering 3 (10) (2019)
Chad J Johnson, Jonathan Cabezas-Olcoz, John F Kernien, Steven X Wang, David J Beebe, Anna Huttenlocher, Hamayail Ansari, Jeniel E Nett
The Extracellular Matrix of Candida albicans Biofilms Impairs Formation of Neutrophil Extracellular Traps. PLoS pathogens 12 (9) (2016)