Narges Rezaie

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 12

Top Topics

Genome Wide Association

Gene Expression

Top Venues

bioRxiv : the preprint server for biology

PLoS computational biology

Scientific data

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

Narges Rezaie, Elisabeth Rebboah, Brian A Williams, Heidi Yahan Liang, Fairlie Reese, Gabriela Balderrama-Gutierrez, Louise A Dionne, Laura G Reinholdt, Diane Trout, Barbara J Wold, Ali Mortazavi
Identification of robust cellular programs using reproducible LDA that impact sex-specific disease progression in different genotypes of a mouse model of AD. bioRxiv : the preprint server for biology (2024)
Elisabeth Rebboah, Narges Rezaie, Brian A Williams, Annika K Weimer, Minyi Shi, Xinqiong Yang, Heidi Yahan Liang, Louise A Dionne, Fairlie Reese, Diane Trout, Jennifer Jou, Ingrid Youngworth, Laura G Reinholdt, Samuel J Morabito, Michael Paul Snyder, Barbara J Wold, Ali Mortazavi
The ENCODE mouse postnatal developmental time course identifies regulatory programs of cell types and cell states. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Elisabeth Rebboah, Narges Rezaie, Brian A Williams, Annika K Weimer, Minyi Shi, Xinqiong Yang, Heidi Yahan Liang, Louise A Dionne, Fairlie Reese, Diane Trout, Jennifer Jou, Ingrid Youngworth, Laura G Reinholdt, Samuel J Morabito, Michael Paul Snyder, Barbara J Wold, Ali Mortazavi
The ENCODE mouse postnatal developmental time course identifies regulatory programs of cell types and cell states. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Elisabeth Rebboah, Narges Rezaie, Brian A Williams, Annika K Weimer, Minyi Shi, Xinqiong Yang, Heidi Yahan Liang, Louise A Dionne, Fairlie Reese, Diane Trout, Jennifer Jou, Ingrid Youngworth, Laura G Reinholdt, Samuel J Morabito, Michael Paul Snyder, Barbara J Wold, Ali Mortazavi
The ENCODE mouse postnatal developmental time course identifies regulatory programs of cell types and cell states. bioRxiv : the preprint server for biology (2024)
Narges Rezaie, Elisabeth Rebboah, Brian A Williams, Heidi Yahan Liang, Fairlie Reese, Gabriela Balderrama-Gutierrez, Louise A Dionne, Laura G Reinholdt, Diane Trout, Barbara J Wold, Ali Mortazavi
Identification of robust cellular programs using reproducible LDA that impact sex-specific disease progression in different genotypes of a mouse model of AD. bioRxiv : the preprint server for biology (2024)
Fairlie Reese, Brian A Williams, Gabriela Balderrama-Gutierrez, Dana Wyman, Muhammed Hasan Çelik, Elisabeth Rebboah, Narges Rezaie, Diane Trout, Milad Razavi-Mohseni, Yunzhe Jiang, Beatrice Borsari, Samuel J Morabito, Heidi Yahan Liang, Cassandra J McGill, Sorena Rahmanian, Jasmine Sakr, Shan Jiang, Weihua Zeng, Klebea Carvalho, Annika K Weimer, Louise A Dionne, Ariel McShane, Karan Bedi, Shaimae I Elhajjajy, Sean Upchurch, Jennifer Jou, Ingrid Youngworth, Aditi K Narayanan, Paul Sud, Otto Jolanki, Benjamin C Hitz, Meenakshi S Kagda, Michael Paul Snyder, Benjamin C Hitz, Jill E Moore, Nishigandha Phalke, David A Bennett, Laura G Reinholdt, Mats Ljungman, Michael A Beer, Mark B Gerstein, Lior Pachter, Roderic Guigo, Barbara J Wold, Ali Mortazavi
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity. bioRxiv : the preprint server for biology (2023)
Narges Rezaie, Masroor Bayati, Mehrab Hamidi, Maedeh Sadat Tahaei, Sadegh Khorasani, Nigel H Lovell, James Breen, Hamid R Rabiee, Hamid Alinejad-Rokny
Somatic point mutations are enriched in non-coding RNAs with possible regulatory function in breast cancer. Communications biology 5 (1) (2022)
Hamid Alinejad-Rokny, Rassa Ghavami Modegh, Hamid R Rabiee, Ehsan Ramezani Sarbandi, Narges Rezaie, Kin Tung Tam, Alistair R R Forrest
MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experiments. PLoS computational biology 18 (6) (2022)
Stefania Forner, Shimako Kawauchi, Gabriela Balderrama-Gutierrez, Enikö A Kramár, Dina P Matheos, Jimmy Phan, Dominic I Javonillo, Kristine M Tran, Edna Hingco, Celia da Cunha, Narges Rezaie, Joshua A Alcantara, David Baglietto-Vargas, Camden Jansen, Jonathan Neumann, Marcelo A Wood, Grant R MacGregor, Ali Mortazavi, Andrea J Tenner, Frank M LaFerla, Kim N Green
Systematic phenotyping and characterization of the 5xFAD mouse model of Alzheimer's disease. Scientific data 8 (1) (2021)