Dinler Amaral Antunes (Dinler A Antunes, Dinler Antunes)

Loop profile ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 14

Top Venues

bioRxiv : the preprint server for biology

Cancer immunology research

Proceedings of the National Academy of Sciences of the United States of America

Scientific reports

Rice University

Federal University of Rio Grande do Sul (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Rice University Oct 27 2014

United States

Postdoctoral Research Associate :: Computer Science

Education History

Federal University of Rio Grande do Sul

Brazil

PHD :: Department of Genetics

Federal University of Rio Grande do Sul

Brazil

MSC :: Department of Genetics

Federal University of Rio Grande do Sul

Brazil

BSC

Publications

Poonam N Desai, Bofei Wang, Andre Fonseca, Pamella Borges, Fatima Zahra Jelloul, Patrick K Reville, Eric Lee, Christopher Ly, Akshay V Basi, Jessica L Root, Natalia Baran, Sean M Post, Qing Deng, Hanxiao Sun, Arif O Harmanci, Jared K Burks, Javier A Gomez, Courtney D D DiNardo, Naval G Daver, Gheath Al-Atrash, Marina Y Konopleva, Michael R Green, Dinler Amaral Antunes, P Andrew Futreal, Dapeng Hao, Hussein A Abbas
Single-Cell Profiling of CD8+ T Cells in Acute Myeloid Leukemia Reveals a Continuous Spectrum of Differentiation and Clonal Hyperexpansion. Cancer immunology research (2023)
Anja Conev, Mauricio Menagatti Rigo, Didier Devaurs, André Faustino Fonseca, Hussain Kalavadwala, Martiela Vaz de Freitas, Cecilia Clementi, Geancarlo Zanatta, Dinler Amaral Antunes, Lydia E Kavraki
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. Briefings in bioinformatics (2023)
Anja Conev, Mauricio Menagatti Rigo, Didier Devaurs, André Faustino Fonseca, Hussain Kalavadwala, Martiela Vaz de Freitas, Cecilia Clementi, Geancarlo Zanatta, Dinler Amaral Antunes, Lydia E Kavraki
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. bioRxiv : the preprint server for biology (2023)
Anja Conev, Mauricio Menagatti Rigo, Didier Devaurs, André Faustino Fonseca, Hussain Kalavadwala, Martiela Vaz de Freitas, Cecilia Clementi, Geancarlo Zanatta, Dinler Amaral Antunes, Lydia E Kavraki
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. bioRxiv : the preprint server for biology (2023)
Poonam N Desai, Bofei Wang, Andre Fonseca, Pamella Borges, Fatima Zahra Jelloul, Patrick K Reville, Eric Lee, Christopher Ly, Akshay V Basi, Jessica L Root, Natalia Baran, Sean M Post, Qing Deng, Hanxiao Sun, Arif O Harmanci, Jared K Burks, Javier A Gomez, Courtney D D DiNardo, Naval G Daver, Gheath Al-Atrash, Marina Y Konopleva, Michael R Green, Dinler Amaral Antunes, P Andrew Futreal, Dapeng Hao, Hussein A Abbas
Single-Cell Profiling of CD8+ T Cells in Acute Myeloid Leukemia Reveals a Continuous Spectrum of Differentiation and Clonal Hyperexpansion. Cancer immunology research (2023)
Sung-Eun Lee, Feng Wang, Maison Grefe, Abel Trujillo-Ocampo, Wilfredo Ruiz-Vasquez, Koichi Takahashi, Hussein A Abbas, Pamella Borges, Dinler Amaral Antunes, Gheath Al-Atrash, Naval G Daver, Jeffrey J Molldrem, P Andrew Futreal, Guillermo Garcia Manero, Jim S Im
Immunologic Predictors for Clinical Responses during Immune Checkpoint Blockade in Patients with Myelodysplastic Syndromes. Clinical cancer research : an official journal of the American Association for Cancer Research (2023)
Sebastian Klein, Jasmin Mischke, Finn Beruldsen, Immo Prinz, Dinler Amaral Antunes, Markus Cornberg, Anke R M Kraft
Individual Epitope-Specific CD8 + T Cell Immune Responses Are Shaped Differently during Chronic Viral Infection. Pathogens (Basel, Switzerland) 12 (5) (2023)
Anja Conev, Mauricio Menagatti Rigo, Didier Devaurs, André Faustino Fonseca, Hussain Kalavadwala, Martiela Vaz de Freitas, Cecilia Clementi, Geancarlo Zanatta, Dinler Amaral Antunes, Lydia E Kavraki
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles. bioRxiv : the preprint server for biology (2023)
Nicolae Sapoval, Amirali Aghazadeh, Michael G Nute, Dinler Amaral Antunes, Advait Balaji, Richard Baraniuk, C J Barberan, Ruth Dannenfelser, Chen Dun, Mohammadamin Edrisi, R A Leo Elworth, Bryce Kille, Anastasios Kyrillidis, Luay K Nakhleh, Cameron R Wolfe, Zhi Yan, Victoria Yao, Todd J Treangen
Current progress and open challenges for applying deep learning across the biosciences. Nature communications 13 (1) (2022)
Sarah Hall-Swan, Dinler Amaral Antunes, Didier Devaurs, Mauricio Menagatti Rigo, Lydia E Kavraki, Geancarlo Zanatta
DINC-COVID: A webserver for ensemble docking with flexible SARS-CoV-2 proteins. bioRxiv : the preprint server for biology (2021)
Jayvee R Abella, Dinler Amaral Antunes, Kyle R Jackson, Gregory Lizée, Cecilia Clementi, Lydia E Kavraki
Markov state modeling reveals alternative unbinding pathways for peptide-MHC complexes. Proceedings of the National Academy of Sciences of the United States of America 117 (48) (2020)
Jayvee R Abella, Dinler Amaral Antunes, Cecilia Clementi, Lydia E Kavraki
APE-Gen: A Fast Method for Generating Ensembles of Bound Peptide-MHC Conformations. Molecules (Basel, Switzerland) 24 (5) (2019)
Didier Devaurs, Dinler Amaral Antunes, Lydia E Kavraki
Revealing Unknown Protein Structures Using Computational Conformational Sampling Guided by Experimental Hydrogen-Exchange Data. International journal of molecular sciences 19 (11) (2018)
Dinler Amaral Antunes, Didier Devaurs, Mark Moll, Gregory Lizée, Lydia E Kavraki
General Prediction of Peptide-MHC Binding Modes Using Incremental Docking: A Proof of Concept. Scientific reports 8 (1) (2018)

Dinler Amaral Antunes.css-eqlu8i{font-size:small;padding-left:4px;} (Dinler A Antunes, Dinler Antunes)

Publication Activity (10 Years)

Top Topics

Top Venues

Dinler Amaral Antunes (Dinler A Antunes, Dinler Antunes)