Emily C Fogarty (Emily Fogarty)

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 12

Top Topics

Pluripotent Stem Cells

Microbial Community

Top Venues

Nature microbiology

Nature communications

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Michael K Yu, Emily C Fogarty, A Murat Eren
Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess. Nature microbiology 9 (3) (2024)
Michael K Yu, Emily C Fogarty, A Murat Eren
Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess. Nature microbiology 9 (3) (2024)
Michael K Yu, Emily C Fogarty, A Murat Eren
Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess. Nature microbiology 9 (3) (2024)
Michael K Yu, Emily C Fogarty, A Murat Eren
Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess. Nature microbiology 9 (3) (2024)
Iva A Veseli, Yiqun T Chen, Matthew S Schechter, Chiara Vanni, Emily C Fogarty, Andrea R Watson, Bana Jabri, Ran Blekhman, Amy D Willis, Michael K Yu, Antonio Fernandez-Guerra, Jessika Füssel, A Murat Eren
Microbes with higher metabolic independence are enriched in human gut microbiomes under stress. bioRxiv : the preprint server for biology (2023)
Emily C Fogarty, Matthew S Schechter, Karen Lolans, Madeline L Sheahan, Iva Veseli, Ryan Moore, Evan Kiefl, Thomas Moody, Phoebe A Rice, Michael K Yu, Mark Mimee, Eugene B Chang, Sandra L Mclellan, Amy D Willis, Laurie E Comstock, A Murat Eren
A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut. bioRxiv : the preprint server for biology (2023)
Brooke L Weigel, Khashiff K Miranda, Emily C Fogarty, Andrea R Watson, Catherine A Pfister
Functional Insights into the Kelp Microbiome from Metagenome-Assembled Genomes. mSystems 7 (3) (2022)
Khashiff K Miranda, Brooke L Weigel, Emily C Fogarty, Iva A Veseli, Anne E Giblin, A Murat Eren, Catherine A Pfister
The Diversity and Functional Capacity of Microbes Associated with Coastal Macrophytes. mSystems 7 (5) (2022)
Poonam Chitale, Alexander D Lemenze, Emily C Fogarty, Avi Shah, Courtney Grady, Aubrey R Odom-Maybe, W Evan Johnson, Jason H Yang, A Murat Eren, Roland Brosch, Pradeep Kumar, David Alland
A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome. Nature communications 13 (1) (2022)
Florian Trigodet, Karen Lolans, Emily C Fogarty, Alon Shaiber, Hilary G Morrison, Luis B Barreiro, Bana Jabri, A Murat Eren
High molecular weight DNA extraction strategies for long-read sequencing of complex metagenomes. Molecular ecology resources 22 (5) (2022)
Poonam Chitale, Alexander D Lemenze, Emily C Fogarty, Avi Shah, Courtney Grady, Aubrey R Odom-Maybe, W Evan Johnson, Jason H Yang, A Murat Eren, Roland Brosch, Pradeep Kumar, David Alland
Author Correction: A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome. Nature communications 13 (1) (2022)
A Murat Eren, Evan Kiefl, Alon Shaiber, Iva A Veseli, Samuel E Miller, Matthew S Schechter, Isaac Fink, Jessica N Pan, Mahmoud Yousef, Emily C Fogarty, Florian Trigodet, Andrea R Watson, Özcan C Esen, Ryan M Moore, Quentin Clayssen, Michael D Lee, Veronika Kivenson, Elaina D Graham, Bryan D Merrill, Antti Karkman, Daniel Blankenberg, John M Eppley, Andreas Sjödin, Jarrod J Scott, Xabier Vázquez-Campos, Luke J McKay, Elizabeth A McDaniel, Sarah L R Stevens, Rika E Anderson, Jessika Fuessel, Antonio Fernandez-Guerra, Lois Maignien, Tom O Delmont, Amy D Willis
Community-led, integrated, reproducible multi-omics with anvi'o. Nature microbiology 6 (1) (2021)