Ilyas Yildirim

ResearcherID Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 12

Top Venues

The journal of physical chemistry. B

Journal of chemical theory and computation

Nature chemistry

Proceedings of the National Academy of Sciences of the United States of America

Florida Atlantic University - John D MacArthur Campus

University of Rochester (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Florida Atlantic University - John D MacArthur Campus Oct 17 2016

United States

Assistant Professor :: Department of Chemistry and Biochemistry

University of Cambridge Aug 01 2014 - Jul 15 2016

United Kingdom

Senior Research Associate :: Department of Chemistry

Northwestern University Jul 15 2010 - Jul 31 2014

United States

Postdoctoral Research Associate :: Department of Chemistry

University of Rochester Sep 01 2008 - Jul 14 2010

United States

Postdoctoral Research Associate :: Department of Chemistry

Education History

University of Rochester Sep 01 2003 - Oct 10 2008

United States

PHD :: Department of Physics and Astronomy

Publications

Ivan Isaac Riveros, Ilyas Yildirim
Prediction of 3D RNA Structures from Sequence Using Energy Landscapes of RNA Dimers: Application to RNA Tetraloops. Journal of chemical theory and computation 20 (10) (2024)
Ivan Isaac Riveros, Ilyas Yildirim
Prediction of 3D RNA Structures from Sequence Using Energy Landscapes of RNA Dimers: Application to RNA Tetraloops. Journal of chemical theory and computation (2024)
Amirhossein Taghavi, Ivan Riveros, David J Wales, Ilyas Yildirim
Evaluating Geometric Definitions of Stacking for RNA Dinucleoside Monophosphates Using Molecular Mechanics Calculations. Journal of chemical theory and computation 18 (6) (2022)
Andrei Ursu, Jared T Baisden, Jessica A Bush, Amirhossein Taghavi, Shruti Choudhary, Yong-Jie Zhang, Tania F Gendron, Leonard Petrucelli, Ilyas Yildirim, Matthew D Disney
A Small Molecule Exploits Hidden Structural Features within the RNA Repeat Expansion That Causes c9ALS/FTD and Rescues Pathological Hallmarks. ACS chemical neuroscience 12 (21) (2021)
Simon Vezina-Dawod, Alicia J Angelbello, Shruti Choudhary, Kye Won Wang, Ilyas Yildirim, Matthew D Disney
Massively Parallel Optimization of the Linker Domain in Small Molecule Dimers Targeting a Toxic r(CUG) Repeat Expansion. ACS medicinal chemistry letters 12 (6) (2021)
Andrei Ursu, Kye Won Wang, Jessica A Bush, Shruti Choudhary, Jonathan L Chen, Jared T Baisden, Yong-Jie Zhang, Tania F Gendron, Leonard Petrucelli, Ilyas Yildirim, Matthew D Disney
Structural Features of Small Molecules Targeting the RNA Repeat Expansion That Causes Genetically Defined ALS/FTD. ACS chemical biology 15 (12) (2020)
Blessy M Suresh, Weichao Li, Peiyuan Zhang, Kye Won Wang, Ilyas Yildirim, Christopher G Parker, Matthew D Disney
A general fragment-based approach to identify and optimize bioactive ligands targeting RNA. Proceedings of the National Academy of Sciences of the United States of America 117 (52) (2020)
Hafeez S Haniff, Laurent Knerr, Xiaohui Liu, Gogce Crynen, Jonas Boström, Daniel Abegg, Alexander Adibekian, Elizabeth Lekah, Kye Won Wang, Michael D Cameron, Ilyas Yildirim, Malin Lemurell, Matthew D Disney
Design of a small molecule that stimulates vascular endothelial growth factor A enabled by screening RNA fold-small molecule interactions. Nature chemistry 12 (10) (2020)
David J Wales, Matthew D Disney, Ilyas Yildirim
Computational Investigation of RNA A-Bulges Related to the Microtubule-Associated Protein Tau Causing Frontotemporal Dementia and Parkinsonism. The journal of physical chemistry. B 123 (1) (2019)
Taiga Fujii, Arun K Thazhathveetil, Ilyas Yildirim, Ryan M Young, Michael R Wasielewski, George C Schatz, Frederick D Lewis
Structure and Dynamics of Electron Injection and Charge Recombination in i-Motif DNA Conjugates. The journal of physical chemistry. B 121 (34) (2017)
Jonathan L Chen, Damian M VanEtten, Matthew A Fountain, Ilyas Yildirim, Matthew D Disney
Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1. Biochemistry 56 (27) (2017)
David J Wales, Ilyas Yildirim
Improving Computational Predictions of Single-Stranded RNA Tetramers with Revised α/γ Torsional Parameters for the Amber Force Field. The journal of physical chemistry. B 121 (14) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Ilyas Yildirim