Ira R Cooke (Ira Cooke)

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 14

Top Topics

Dna Methylation

Top Venues

Science (New York, N.Y.)

Science advances

Evolutionary applications

Molecular ecology

This page only lists publications with an associated author ORCID identifier.

Publications

Jia Zhang, Nadja M Schneller, Matt A Field, Cheong Xin Chan, David J Miller, Jan M Strugnell, Cynthia Riginos, Line Bay, Ira R Cooke
Chromosomal inversions harbour excess mutational load in the coral, Acropora kenti, on the Great Barrier Reef. Molecular ecology (2024)
Jia Zhang, Nadja M Schneller, Matt A Field, Cheong Xin Chan, David J Miller, Jan M Strugnell, Cynthia Riginos, Line Bay, Ira R Cooke
Chromosomal inversions harbour excess mutational load in the coral, Acropora kenti, on the Great Barrier Reef. Molecular ecology 33 (16) (2024)
Sally C Y Lau, Nerida G Wilson, Nicholas R Golledge, Tim R Naish, Phillip C Watts, Catarina N S Silva, Ira R Cooke, A Louise Allcock, Felix Christopher Mark, Katrin Linse, Jan M Strugnell
Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science (New York, N.Y.) 382 (6677) (2023)
Sally C Y Lau, Nerida G Wilson, Nicholas R Golledge, Tim R Naish, Phillip C Watts, Catarina N S Silva, Ira R Cooke, A Louise Allcock, Felix Christopher Mark, Katrin Linse, Jan M Strugnell
Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science (New York, N.Y.) 382 (6677) (2023)
Sally C Y Lau, Nerida G Wilson, Nicholas R Golledge, Tim R Naish, Phillip C Watts, Catarina N S Silva, Ira R Cooke, A Louise Allcock, Felix Christopher Mark, Katrin Linse, Jan M Strugnell
Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science (New York, N.Y.) 382 (6677) (2023)
Sally C Y Lau, Nerida G Wilson, Nicholas R Golledge, Tim R Naish, Phillip C Watts, Catarina N S Silva, Ira R Cooke, A Louise Allcock, Felix Christopher Mark, Katrin Linse, Jan M Strugnell
Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial. Science (New York, N.Y.) 382 (6677) (2023)
Ambrocio Melvin A Matias, Iva Popovic, Joshua A Thia, Ira R Cooke, Gergely Torda, Vimoksalehi Lukoschek, Line Kolind Bay, Sun W Kim, Cynthia Riginos
Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef. Evolutionary applications 16 (2) (2022)
Ambrocio Melvin A Matias, Iva Popovic, Joshua A Thia, Ira R Cooke, Gergely Torda, Vimoksalehi Lukoschek, Line Kolind Bay, Sun W Kim, Cynthia Riginos
Cryptic diversity and spatial genetic variation in the coral Acropora tenuis and its endosymbionts across the Great Barrier Reef. Evolutionary applications 16 (2) (2022)
Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch, Jakub Kała, Dominik Rafacz, Mateusz Bąkała, Jadwiga Słowik, Rafal Kolenda, Stefan Rödiger, Legana C H W Fingerhut, Ira R Cooke, Paweł Mackiewicz, Burdukiewicz Michał
Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data. Briefings in bioinformatics 23 (5) (2022)
Luke Thomas, Jim N Underwood, Noah H Rose, William J Belden, Zoe T Richards, Laurence Dugal, Camille M Grimaldi, Ira R Cooke, Stephen R Palumbi, James P Gilmour
Spatially varying selection between habitats drives physiological shifts and local adaptation in a broadcast spawning coral on a remote atoll in Western Australia. Science advances 8 (17) (2022)
Jia Zhang, Zoe T Richards, Arne A S Adam, Cheong Xin Chan, Chuya Shinzato, James Gilmour, Luke Thomas, Jan M Strugnell, David J Miller, Ira R Cooke
Evolutionary responses of a reef-building coral to climate change at the end of the last glacial maximum. Molecular biology and evolution (2022)
Legana C H W Fingerhut, David J Miller, Jan M Strugnell, Norelle L Daly, Ira R Cooke
ampir: an R package for fast genome-wide prediction of antimicrobial peptides. Bioinformatics (Oxford, England) 36 (21) (2021)
Ira R Cooke, Hua Ying, Sylvain Forêt, Pim Bongaerts, Jan M Strugnell, Oleg Simakov, Jia Zhang, Matthew A Field, Mauricio Rodriguez-Lanetty, Sara C Bell, David G Bourne, Madeleine J H van Oppen, Mark A Ragan, David J Miller
Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts. Science advances 6 (48) (2020)
Jorrit Boekel, John M Chilton, Ira R Cooke, Peter L Horvatovich, Pratik D Jagtap, Lukas Käll, Janne Lehtiö, Pieter Lukasse, Perry D Moerland, Timothy J Griffin
Multi-omic data analysis using Galaxy. Nature biotechnology 33 (2) (2016)