James M Shine (James Shine, J M Shine)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 67

Top Venues

eLife

bioRxiv : the preprint server for biology

Science advances

Network neuroscience (Cambridge, Mass.)

The University of Sydney

The University of Sydney (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

The University of Sydney Mar 01 2019

Australia

Robinson Fellow

The University of Sydney Mar 01 2017 - Feb 28 2019

Australia

CJ Martin Fellow :: Medicine

Stanford University Nov 01 2014 - Mar 01 2017

United States

Postdoctoral Fellow :: Psychology

Education History

The University of Sydney Mar 01 2010 - Jun 16 2013

Australia

PHD :: Medicine

The University of Sydney Jan 01 2004 - Dec 31 2007

Australia

BSC :: Medicine

The University of Sydney Jan 01 2001 - Dec 01 2003

Australia

BSC :: Science

Publications

Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Ru Q Kong, R Nathan Spreng, Aihuiping Xue, Richard F Betzel, Jessica R Cohen, Jessica S Damoiseaux, Felipe De Brigard, Simon B Eickhoff, Alex Fornito, Caterina Gratton, Evan M Gordon, Avram J Homes, Angela R Laird, Linda J Larson-Prior, Lisa D Nickerson, Ana Luísa Pinho, Akshay Nair, Sepideh Sadaghiani, James M Shine, Anastasia Yendiki, B T Thomas Yeo, Lucina Q Uddin
A network correspondence toolbox for quantitative evaluation of novel neuroimaging results. bioRxiv : the preprint server for biology (2024)
Valerie J Sydnor, Joëlle Bagautdinova, Bart Larsen, Michael J Arcaro, Deanna M Barch, Danielle S Bassett, Aaron F Alexander-Bloch, Philip A Cook, Sydney Covitz, Alexandre R Franco, Raquel E Gur, Ruben C Gur, Allyson P Mackey, Kahini Mehta, Steven L Meisler, Michael P Milham, Tyler M Moore, Eli J Müller, David R Roalf, Taylor Salo, Gabriel Schubiner, Jakob Seidlitz, Russell T Shinohara, James M Shine, Fang-Cheng Yeh, Matthew C Cieslak, Theodore Daniel Satterthwaite
A sensorimotor-association axis of thalamocortical connection development. bioRxiv : the preprint server for biology (2024)
Erin Neyhart, Na Zhou, Brandon R Munn, Robert G Law, Cameron L Smith, Zakir H Mridha, Francisco A Blanco, Guochuan Li, Yu-Long Li, Matthew James McGinley, James M Shine, Jacob Reimer
Cortical acetylcholine dynamics are predicted by cholinergic axon activity and behavior state. bioRxiv : the preprint server for biology (2024)
Erin Neyhart, Na Zhou, Brandon R Munn, Robert G Law, Cameron L Smith, Zakir H Mridha, Francisco A Blanco, Guochuan Li, Yu-Long Li, Matthew James McGinley, James M Shine, Jacob Reimer
Cortical acetylcholine dynamics are predicted by cholinergic axon activity and behavior state. bioRxiv : the preprint server for biology (2024)
Itia A Favre-Bulle, Eli J Müller, Conrad Lee, Leandro Aluisio Scholz, Joshua Arnold, Brandon Munn, Gabriel Wainstein, James M Shine, Ethan K Scott
Brain-wide impacts of sedation on spontaneous activity and auditory processing in larval zebrafish. bioRxiv : the preprint server for biology (2024)
Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Christina Grimm, Sian N Duss, Mattia Privitera, Brandon R Munn, Nikolaos Karalis, Stefan Frässle, Maria Wilhelm, Tommaso Patriarchi, Daniel Razansky, Nicole Wenderoth, James M Shine, Johannes Bohacek, Valerio Zerbi
Tonic and burst-like locus coeruleus stimulation distinctly shift network activity across the cortical hierarchy. Nature neuroscience (2024)
Erin Neyhart, Na Zhou, Brandon R Munn, Robert G Law, Cameron L Smith, Zakir H Mridha, Francisco A Blanco, Guochuan Li, Yu-Long Li, Matthew James McGinley, James M Shine, Jacob Reimer
Cortical acetylcholine dynamics are predicted by cholinergic axon activity and behavior state. bioRxiv : the preprint server for biology (2024)
Valerie J Sydnor, Joëlle Bagautdinova, Bart Larsen, Michael J Arcaro, Deanna M Barch, Danielle S Bassett, Aaron F Alexander-Bloch, Philip A Cook, Sydney Covitz, Alexandre R Franco, Raquel E Gur, Ruben C Gur, Allyson P Mackey, Kahini Mehta, Steven L Meisler, Michael P Milham, Tyler M Moore, Eli J Müller, David R Roalf, Taylor Salo, Gabriel Schubiner, Jakob Seidlitz, Russell T Shinohara, James M Shine, Fang-Cheng Yeh, Matthew C Cieslak, Theodore Daniel Satterthwaite
A sensorimotor-association axis of thalamocortical connection development. bioRxiv : the preprint server for biology (2024)
Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Valerie J Sydnor, Joëlle Bagautdinova, Bart Larsen, Michael J Arcaro, Deanna M Barch, Danielle S Bassett, Aaron F Alexander-Bloch, Philip A Cook, Sydney Covitz, Alexandre R Franco, Raquel E Gur, Ruben C Gur, Allyson P Mackey, Kahini Mehta, Steven L Meisler, Michael P Milham, Tyler M Moore, Eli J Müller, David R Roalf, Taylor Salo, Gabriel Schubiner, Jakob Seidlitz, Russell T Shinohara, James M Shine, Fang-Cheng Yeh, Matthew C Cieslak, Theodore Daniel Satterthwaite
A sensorimotor-association axis of thalamocortical connection development. bioRxiv : the preprint server for biology (2024)
Daniel Toker, Eli Müller, Hiroyuki Miyamoto, Maurizio S Riga, Laia Lladó-Pelfort, Kazuhiro Yamakawa, Francesc Artigas, James M Shine, Andrew E Hudson, Nader Pouratian, Martin M Monti
Criticality supports cross-frequency cortical-thalamic information transfer during conscious states. eLife 13 (2024)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
James M Shine
Neuromodulatory control of complex adaptive dynamics in the brain. Interface focus 13 (3) (2023)
Eli J Müller, Fulvia Palesi, Kevin Y Hou, Joshua Tan, Thomas Close, Claudia A M Gandini Wheeler-Kingschott, Egidio D'Angelo, Fernando Calamante, James M Shine
Parallel processing relies on a distributed, low-dimensional cortico-cerebellar architecture. Network neuroscience (Cambridge, Mass.) 7 (2) (2023)
James M Shine, Laura D Lewis, Douglas D Garrett, Kai Hwang
The impact of the human thalamus on brain-wide information processing. Nature reviews. Neuroscience (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Emily S Finn, Russell A Poldrack, James M Shine
Functional neuroimaging as a catalyst for integrated neuroscience. Nature 623 (7986) (2023)
Yun-Shuang Fan, Yong Xu, Şeyma Bayrak, James M Shine, Bin Wan, Haoru Li, Liang Li, Siqi Yang, Yao Meng, Sofie Louise Valk, Huafu Chen
Macroscale Thalamic Functional Organization Disturbances and Underlying Core Cytoarchitecture in Early-Onset Schizophrenia. Schizophrenia bulletin (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Brandon R Munn, Eli J Müller, Vicente Medel, Sharon L Naismith, Joseph T Lizier, Robert D Sanders, James M Shine
Neuronal connected burst cascades bridge macroscale adaptive signatures across arousal states. Nature communications 14 (1) (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Shawn D X Kong, Christopher James Gordon, Camilla M Hoyos, Rick Wassing, Angela L D'Rozario, Loren Mowszowski, Catriona Ireland, Jake R Palmer, Ronald R Grunstein, James M Shine, Andrew C McKinnon, Sharon L Naismith
Heart rate variability during slow wave sleep is linked to functional connectivity in the central autonomic network. Brain communications 5 (3) (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Justine Y Hansen, Simone Cauzzo, Kavita Singh, María Guadalupe García-Gomar, James M Shine, Marta Bianciardi, Bratislav Mišić
Integrating brainstem and cortical functional architectures. bioRxiv : the preprint server for biology (2023)
Bratislav Mišić, Justine Y Hansen, Simone Cauzzo, Kavita Singh, Maria Guadalupe Garcia-Gomar, James M Shine, Marta Bianciardi
Integrating brainstem and cortical functional architectures. Research square (2023)
Joshua B C Tan, Eli J Müller, Isabella F Orlando, Natasha L Taylor, Daniel S Margulies, Jennifer Szeto, Simon J G Lewis, James M Shine, Claire O'Callaghan
Abnormal higher-order network interactions in Parkinson's disease visual hallucinations. Brain : a journal of neurology (2023)
Brandon R Munn, Eli J Müller, Jaan Aru, Christopher J Whyte, Albert Gidon, Matthew Evan Larkum, James M Shine
A thalamocortical substrate for integrated information via critical synchronous bursting. Proceedings of the National Academy of Sciences of the United States of America 120 (46) (2023)
Zdenka Kuncic, Adrian Diaz-Alvarez, Ruomin Zhu, Natesh Ganesh, James M Shine, Tomonobu Nakayama, Zdenka Kuncic
Neuromorphic learning, working memory, and metaplasticity in nanowire networks. Science advances 9 (16) (2023)
Natasha L Taylor, James M Shine
A whole new world: embracing the systems-level to understand the indirect impact of pathology in neurodegenerative disorders. Journal of neurology 270 (4) (2022)
Natasha L Taylor, James M Shine
A whole new world: embracing the systems-level to understand the indirect impact of pathology in neurodegenerative disorders. Journal of neurology 270 (4) (2022)
Kartik K Iyer, Kai Hwang, Luke J Hearne, Eli Muller, Mark D'Esposito, James M Shine, Luca Cocchi
Focal neural perturbations reshape low-dimensional trajectories of brain activity supporting cognitive performance. Nature communications 13 (1) (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Manish Saggar, James M Shine, Raphaël Liégeois, Nico U F Dosenbach, Damien A Fair
Precision dynamical mapping using topological data analysis reveals a hub-like transition state at rest. Nature communications 13 (1) (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contribution to cognitive task activity. eLife 11 (2022)
Natasha L Taylor, James M Shine
A whole new world: embracing the systems-level to understand the indirect impact of pathology in neurodegenerative disorders. Journal of neurology 270 (4) (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Justine Y Hansen, Golia Shafiei, Ross D Markello, Kelly Smart, Sylvia M L Cox, Martin Norgaard, Vincent Beliveau, Yanjun Wu, Jean-Dominique Gallezot, Étienne Aumont, Stijn Servaes, Stephanie G Scala, Jonathan M DuBois, Gabriel Wainstein, Gleb Bezgin, Thomas Funck, Taylor W Schmitz, R Nathan Spreng, Marian Galovic, Matthias J Koepp, John S Duncan, Jonathan P Coles, Tim D Fryer, Franklin I Aigbirhio, Colm J McGinnity, Alexander Hammers, Jean-Paul Soucy, Sylvain Baillet, Synthia Guimond, Jarmo Hietala, Marc-André Bedard, Marco Leyton, Eliane Kobayashi, Pedro Rosa-Neto, Melanie Ganz, Gitte Moos Knudsen, Nicola Palomero-Gallagher, James M Shine, Richard E Carson, Lauri Tuominen, Alain Dagher, Bratislav Mišić
Mapping neurotransmitter systems to the structural and functional organization of the human neocortex. Nature neuroscience 25 (11) (2022)
James M Shine, Claire O'Callaghan, Ishan C Walpola, Gabriel Wainstein, Natasha L Taylor, Jaan Aru, Bryce Huebner, Yohan J John
Understanding the effects of serotonin in the brain through its role in the gastrointestinal tract. Brain : a journal of neurology 145 (9) (2022)
Natasha L Taylor, James M Shine
A whole new world: embracing the systems-level to understand the indirect impact of pathology in neurodegenerative disorders. Journal of neurology (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Yohan J John, Kayle S Sawyer, Karthik Srinivasan, Eli J Müller, Brandon R Munn, James M Shine
It's about time: Linking dynamical systems with human neuroimaging to understand the brain. Network neuroscience (Cambridge, Mass.) 6 (4) (2022)
Yarden Cohen, Tatiana A Engel, Christopher Langdon, Grace W Lindsay, Torben Ott, Megan A K Peters, James M Shine, Vincent Breton-Provencher, Srikanth Ramaswamy
Recent Advances at the Interface of Neuroscience and Artificial Neural Networks. The Journal of neuroscience : the official journal of the Society for Neuroscience 42 (45) (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Natasha L Taylor, Gabriel Wainstein, Dione Quek, Simon J G Lewis, James M Shine, Kaylena A Ehgoetz Martens
The Contribution of Noradrenergic Activity to Anxiety-Induced Freezing of Gait. Movement disorders : official journal of the Movement Disorder Society 37 (7) (2022)
Elie Matar, Kaylena A Ehgoetz Martens, Joseph R Phillips, Gabriel Wainstein, Glenda M Halliday, Simon J G Lewis, James M Shine
Dynamic network impairments underlie cognitive fluctuations in Lewy body dementia. NPJ Parkinson's disease 8 (1) (2022)
Vicente Medel, Nicolas A Crossley, Ivana Gajardo, Eli J Müller, Luis Felipe Barros, James M Shine, Jimena Sierralta
Whole-brain neuronal MCT2 lactate transporter expression links metabolism to human brain structure and function. Proceedings of the National Academy of Sciences of the United States of America 119 (33) (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Kai Hwang, James M Shine, Michael W Cole, Evan Sorenson
Thalamocortical contributions to cognitive task activity. eLife 11 (2022)
Yohan J John, Kayle S Sawyer, Karthik Srinivasan, Eli J Müller, Brandon R Munn, James M Shine
It's about time: Linking dynamical systems with human neuroimaging to understand the brain. Network neuroscience (Cambridge, Mass.) 6 (4) (2022)
Kai Hwang, James M Shine, Joel Bruss, Daniel Tranel, Aaron Boes
Neuropsychological evidence of multi-domain network hubs in the human thalamus. eLife 10 (2021)
Brandon R Munn, Eli J Müller, Gabriel Wainstein, James M Shine
The ascending arousal system shapes neural dynamics to mediate awareness of cognitive states. Nature communications 12 (1) (2021)
Gabriel Wainstein, Daniel Rojas-Líbano, Vicente Medel, Dag Alnaes, Knut K Kolskår, Tor Endestad, Bruno Laeng, Tomas Ossandon, Nicolás Crossley, Elie Matar, James M Shine
The ascending arousal system promotes optimal performance through mesoscale network integration in a visuospatial attentional task. Network neuroscience (Cambridge, Mass.) 5 (4) (2021)
James M Shine, Eli J Müller, Brandon R Munn, Joana Cabral, Rosalyn J Moran, Michael Breakspear
Computational models link cellular mechanisms of neuromodulation to large-scale neural dynamics. Nature neuroscience 24 (6) (2021)
James M Shine, Mike Li, Oluwasanmi Koyejo, Ben Fulcher, Joseph T Lizier
Nonlinear reconfiguration of network edges, topology and information content during an artificial learning task. Brain informatics 8 (1) (2021)
William Hedley Thompson, Remya Nair, H Oya, Oscar Esteban, James M Shine, Christopher I Petkov, R A Poldrack, M Howard, R Adolphs
A data resource from concurrent intracranial stimulation and functional MRI of the human brain. Scientific data 7 (1) (2020)
Eli J Müller, Brandon R Munn, James M Shine
Diffuse neural coupling mediates complex network dynamics through the formation of quasi-critical brain states. Nature communications 11 (1) (2020)
Daniel J Lurie, Daniel A Kessler, Danielle S Bassett, Richard F Betzel, Michael Breakspear, Shella D Keilholz, Aaron Kucyi, Raphael Liégeois, Martin A Lindquist, Anthony Randal McIntosh, Russell A Poldrack, James M Shine, William Hedley Thompson, Natalia Z Bielczyk, Linda Douw, Dominik Kraft, Robyn L Miller, Muthuraman Muthuraman, Lorenzo Pasquini, Akshay Nair, Diego Vidaurre, Hua Xie, Vince D Calhoun
Questions and controversies in the study of time-varying functional connectivity in resting fMRI. Network neuroscience (Cambridge, Mass.) 4 (1) (2020)
James M Shine, Michael Breakspear, Peter T Bell, Kaylena A Ehgoetz Martens, Richard Shine, Oluwasanmi Koyejo, Olaf Sporns, Russell A Poldrack
Human cognition involves the dynamic integration of neural activity and neuromodulatory systems. Nature neuroscience 22 (2) (2019)
Aaron Kucyi, Jessica Schrouff, Stephan Bickel, Brett L Foster, James M Shine, Josef Parvizi
Intracranial Electrophysiology Reveals Reproducible Intrinsic Functional Connectivity within Human Brain Networks. The Journal of neuroscience : the official journal of the Society for Neuroscience 38 (17) (2018)
James M Shine, Matthew J Aburn, Michael Breakspear, Russell A Poldrack
The modulation of neural gain facilitates a transition between functional segregation and integration in the brain. eLife 7 (2018)
James M Shine, Ruud L van den Brink, Dennis Hernaus, Sander Nieuwenhuis, Russell A Poldrack
Catecholaminergic manipulation alters dynamic network topology across cognitive states. Network neuroscience (Cambridge, Mass.) 2 (3) (2018)
James M Shine, Aaron Kucyi, Brett L Foster, Stephan Bickel, Danhong Wang, Hesheng Liu, Russell A Poldrack, Liang-Tien Hsieh, Jen Chun Hsiang, Josef Parvizi
Distinct Patterns of Temporal and Directional Connectivity among Intrinsic Networks in the Human Brain. The Journal of neuroscience : the official journal of the Society for Neuroscience 37 (40) (2017)
Claire O'Callaghan, Alana J Muller, James M Shine
Clarifying the role of neural networks in complex hallucinatory phenomena. The Journal of neuroscience : the official journal of the Society for Neuroscience 34 (36) (2014)

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Publication Activity (10 Years)

Top Topics

Top Venues

James M Shine (James Shine, J M Shine)