Jan Rupp (J Rupp)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 31

Top Topics

Community Acquired Pneumonia

Antibiotic Resistance Genes

Pseudomonas Aeruginosa

Top Venues

Microbiology spectrum

Nature communications

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Leif Tueffers, Aditi Batra, Johannes Zimmermann, João Botelho, Florian Buchholz, Junqi Liao, Nicolás Mendoza Mejía, Antje Munder, Jens Klockgether, Burkhard Tüemmler, Jan Rupp, Hinrich Schulenburg
Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel. Microbiology spectrum (2024)
Christina Forstner, Christian Schönherr, Marcus Panning, Norman Rose, Theo Dähne, Stefan Hagel, Sebastian Weis, Jan Rupp, Gernot G U Rohde, Martin Witzenrath, Mathias W Pletz, null null
Frequency and clinical significance of Herpes simplex virus type 1/2 reactivation in adult patients with mild to moderately severe community-acquired pneumonia: a multicentre cohort study. Infection (2024)
Leif Tueffers, Aditi Batra, Johannes Zimmermann, João Botelho, Florian Buchholz, Junqi Liao, Nicolás Mendoza Mejía, Antje Munder, Jens Klockgether, Burkhard Tüemmler, Jan Rupp, Hinrich Schulenburg
Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel. Microbiology spectrum 12 (7) (2024)
Leif Tueffers, Aditi Batra, Johannes Zimmermann, João Botelho, Florian Buchholz, Junqi Liao, Nicolás Mendoza Mejía, Antje Munder, Jens Klockgether, Burkhard Tüemmler, Jan Rupp, Hinrich Schulenburg
Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel. Microbiology spectrum 12 (7) (2024)
Leif Tueffers, Aditi Batra, Johannes Zimmermann, João Botelho, Florian Buchholz, Junqi Liao, Nicolás Mendoza Mejía, Antje Munder, Jens Klockgether, Burkhard Tüemmler, Jan Rupp, Hinrich Schulenburg
Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel. Microbiology spectrum 12 (7) (2024)
Swapnil Prakash Doijad, Nicolas Gisch, Renate Frantz, Bajarang Vasant Kumbhar, Jane Falgenhauer, Can Imirzalioglu, Linda Falgenhauer, Alexander Mischnik, Jan Rupp, Michael Behnke, Michael Buhl, Simone Eisenbeis, Petra Gastmeier, Hanna Gölz, Georg Alexander Häcker, Nadja Käding, Winfried V Kern, Axel Kola, Evelyn Kramme, Silke Peter, Anna M Rohde, Harald Seifert, Evelina Tacconelli, Maria J G T Vehreschild, Sarah Victoria Walker, Janine Zweigner, Dominik Schwudke, null null, Trinad Chakraborty
Resolving colistin resistance and heteroresistance in Enterobacter species. Nature communications 14 (1) (2023)
Maria Effenberger, Silvio Waschina, Christina Bronowski, Gregor Sturm, Oronzo Tassiello, Felix Sommer, Andreas Zollner, Christina Watschinger, Felix Grabherr, Ronald Gstir, Christoph Grander, Barbara Enrich, Reto Bale, Daniel Putzer, Angela Djanani, Alexander R Moschen, Heinz Zoller, Jan Rupp, Stefan Schreiber, Remy Burcelin, Cornelia Lass-Flörl, Zlatko Trajanoski, Georg Oberhuber, Philip C Rosenstiel, Timon E Adolph, Konrad Aden, Herbert Tilg
A gut bacterial signature in blood and liver tissue characterizes cirrhosis and hepatocellular carcinoma. Hepatology communications 7 (7) (2023)
Simon Graspeuntner, M Lupatsii, L Dashdorj, A Rody, Jan Rupp, V Bossung, C Härtel
First-Day-of-Life Rectal Swabs Fail To Represent Meconial Microbiota Composition and Underestimate the Presence of Antibiotic Resistance Genes. Microbiology spectrum (2023)
Swapnil Prakash Doijad, Nicolas Gisch, Renate Frantz, Bajarang Vasant Kumbhar, Jane Falgenhauer, Can Imirzalioglu, Linda Falgenhauer, Alexander Mischnik, Jan Rupp, Michael Behnke, Michael Buhl, Simone Eisenbeis, Petra Gastmeier, Hanna Gölz, Georg Alexander Häcker, Nadja Käding, Winfried V Kern, Axel Kola, Evelyn Kramme, Silke Peter, Anna M Rohde, Harald Seifert, Evelina Tacconelli, Maria J G T Vehreschild, Sarah Victoria Walker, Janine Zweigner, Dominik Schwudke, null null, Trinad Chakraborty
Resolving colistin resistance and heteroresistance in Enterobacter species. Nature communications 14 (1) (2023)
Anna Maria Rohde, Alexander Mischnik, Michael Behnke, Ariane Dinkelacker, Simone Eisenbeis, Jane Falgenhauer, Petra Gastmeier, Georg Häcker, Susanne Herold, Can Imirzalioglu, Nadja Käding, Evelyn Kramme, Silke Peter, Ellen Piepenbrock, Jan Rupp, Christian Schneider, Frank Schwab, Harald Seifert, Michaela Steib-Bauert, Evelina Tacconelli, Janina Trauth, Maria J G T Vehreschild, Sarah V Walker, Winfried V Kern, Nathalie Jazmati, null null
Association of ward-level antibiotic consumption with healthcare-associated Clostridioides difficile infections: an ecological study in five German university hospitals, 2017-2019. The Journal of antimicrobial chemotherapy (2023)
Jerome Genth, Kathrin Schäfer, Liam Cassidy, Simon Graspeuntner, Jan Rupp, Andreas Tholey
Identification of proteoforms of short open reading frame-encoded peptides in Blautia producta under different cultivation conditions. Microbiology spectrum (2023)
Swapnil Prakash Doijad, Nicolas Gisch, Renate Frantz, Bajarang Vasant Kumbhar, Jane Falgenhauer, Can Imirzalioglu, Linda Falgenhauer, Alexander Mischnik, Jan Rupp, Michael Behnke, Michael Buhl, Simone Eisenbeis, Petra Gastmeier, Hanna Gölz, Georg Alexander Häcker, Nadja Käding, Winfried V Kern, Axel Kola, Evelyn Kramme, Silke Peter, Anna M Rohde, Harald Seifert, Evelina Tacconelli, Maria J G T Vehreschild, Sarah Victoria Walker, Janine Zweigner, Dominik Schwudke, null null, Trinad Chakraborty
Resolving colistin resistance and heteroresistance in Enterobacter species. Nature communications 14 (1) (2023)
Swapnil Prakash Doijad, Nicolas Gisch, Renate Frantz, Bajarang Vasant Kumbhar, Jane Falgenhauer, Can Imirzalioglu, Linda Falgenhauer, Alexander Mischnik, Jan Rupp, Michael Behnke, Michael Buhl, Simone Eisenbeis, Petra Gastmeier, Hanna Gölz, Georg Alexander Häcker, Nadja Käding, Winfried V Kern, Axel Kola, Evelyn Kramme, Silke Peter, Anna M Rohde, Harald Seifert, Evelina Tacconelli, Maria J G T Vehreschild, Sarah Victoria Walker, Janine Zweigner, Dominik Schwudke, null null, Trinad Chakraborty
Resolving colistin resistance and heteroresistance in Enterobacter species. Nature communications 14 (1) (2023)
Swapnil Prakash Doijad, Nicolas Gisch, Renate Frantz, Bajarang Vasant Kumbhar, Jane Falgenhauer, Can Imirzalioglu, Linda Falgenhauer, Alexander Mischnik, Jan Rupp, Michael Behnke, Michael Buhl, Simone Eisenbeis, Petra Gastmeier, Hanna Gölz, Georg Alexander Häcker, Nadja Käding, Winfried V Kern, Axel Kola, Evelyn Kramme, Silke Peter, Anna M Rohde, Harald Seifert, Evelina Tacconelli, Maria J G T Vehreschild, Sarah Victoria Walker, Janine Zweigner, Dominik Schwudke, null null, Trinad Chakraborty
Resolving colistin resistance and heteroresistance in Enterobacter species. Nature communications 14 (1) (2023)
Gabriela Rios Martini, Ekaterina Tikhonova, Elisa Rosati, Meghan Bialt DeCelie, Laura Katharina Sievers, Florian Tran, Matthias Lessing, Arne Bergfeld, Sophia Hinz, Susanna Nikolaus, Julia Kümpers, Anna Matysiak, Philipp Hofmann, Carina Saggau, Stephan Schneiders, Ann-Kristin Kamps, Gunnar Jacobs, Wolfgang Lieb, Jochen Maul, Britta Siegmund, Barbara Seegers, Holger Hinrichsen, Hans-Heinrich Oberg, Daniela Wesch, Stefan Bereswill, Markus M Heimesaat, Jan Rupp, Olaf Kniemeyer, Axel A Brakhage, Sascha Brunke, Bernhard Hube, Konrad Aden, Andre Franke, Iliyan D Iliev, Alexander Scheffold, Stefan Schreiber, Petra Bacher
Selection of cross-reactive T cells by commensal and food-derived yeasts drives cytotoxic T H 1 cell responses in Crohn's disease. Nature medicine (2023)
Hanna Marti, Michael Biggel, Kensuke Shima, Delia Onorini, Jan Rupp, Steve J Charette, Nicole Borel
Chlamydia suis displays high transformation capacity with complete cloning vector integration into the chromosomal rrn-nqrF plasticity zone. Microbiology spectrum (2023)
Benedikt Fels, Sovon Acharya, Carl Vahldieck, Tobias Graf, Nadja Käding, Jan Rupp, Kristina Kusche-Vihrog
Mineralocorticoid receptor-antagonism prevents COVID-19-dependent glycocalyx damage. Pflugers Archiv : European journal of physiology 474 (10) (2022)
Verena Bossung, Mariia Lupatsii, Lkhagvademberel Dashdorj, Oronzo Tassiello, Sinje Jonassen, Julia Pagel, Martin Demmert, Ellinor Anna Wolf, Achim Rody, Silvio Waschina, Simon Graspeuntner, Jan Rupp, Christoph Härtel
Timing of antimicrobial prophylaxis for cesarean section is critical for gut microbiome development in term born infants. Gut microbes 14 (1) (2022)
Christine Klein, Max Borsche, Alexander Balck, Bandik Föh, Johann Rahmöller, Elke Peters, Jan Knickmann, Miranda Lane, Eva-Juliane Vollstedt, Susanne A Elsner, Nadja Käding, Susanne Hauswaldt, Tanja Lange, Jennifer E Hundt, Selina Lehrian, Julia Giese, Alexander Mischnik, Stefan Niemann, Florian P Maurer, Susanne Homolka, Laura Paulowski, Jan Kramer, Christoph Twesten, Christian Sina, Gabriele Gillessen-Kaesbach, Hauke Busch, Marc Ehlers, Stefan Taube, Jan Rupp, Alexander Katalinic
One-year surveillance of SARS-CoV-2 transmission of the ELISA cohort: A model for population-based monitoring of infection risk. Science advances 8 (15) (2022)
Innocent Afeke, Ahmed Moustafa, Misa Hirose, Mareike Becker, Hauke Busch, Axel Kuenstner, Anke Faehnrich, Anthony S Ablordey, Christoph Haertel, Kokou Hefoume Amega-Aho, Mohamed Tarek Badr, Jan Rupp, Saleh Ibrahim
Draft Genome Sequences and Antimicrobial Profiles of Three Staphylococcus epidermidis Strains from Neonatal Blood Samples. Microbiology resource announcements 10 (13) (2021)
Kensuke Shima, Inga Kaufhold, Thomas Eder, Nadja Käding, Nis Schmidt, Iretiolu M Ogunsulire, René Deenen, Karl Köhrer, Dirk Friedrich, Sophie E Isay, Florian Grebien, Matthias Klinger, Barbara C Richer, Ulrich L Günther, George S Deepe, Thomas Rattei, Jan Rupp
Regulation of the Mitochondrion-Fatty Acid Axis for the Metabolic Reprogramming of Chlamydia trachomatis during Treatment with β-Lactam Antimicrobials. mBio 12 (2) (2021)
D C W Braeken, A Essig, M Panning, R Hoerster, M Nawrocki, K Dalhoff, N Suttorp, T Welte, M W Pletz, M Witzenrath, G G U Rohde, Jan Rupp, null null
Shift in bacterial etiology from the CAPNETZ cohort in patients with community-acquired pneumonia: data over more than a decade. Infection 49 (3) (2021)
Kensuke Shima, Mary M Weber, Christiane Schnee, Konrad Sachse, Nadja Käding, Matthias Klinger, Jan Rupp
Development of a Plasmid Shuttle Vector System for Genetic Manipulation of Chlamydia psittaci. mSphere 5 (4) (2020)
Matthias I Gröschel, Conor Joseph Meehan, Ivan Barilar, Margo Diricks, Aitor Gonzaga, Matthias Steglich, Oscar Conchillo-Solé, Isabell-Christin Scherer, Uwe Mamat, Christian Friedemann Luz, Katrien De Bruyne, Christian Utpatel, Daniel Yero, Isidre Gibert, Xavier Daura, Stefanie Kampmeier, Nurdyana Abdul Rahman, Michael Kresken, Tjip S van der Werf, Ifey Alio, Wolfgang J Streit, Kai Zhou, Thomas Schwartz, John W A Rossen, Maha Reda Farhat, Ulrich E Schaible, Ulrich Nübel, Jan Rupp, Joerg Steinmann, Stefan Niemann, Thomas Andreas Kohl
The phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia. Nature communications 11 (1) (2020)
Anna-Lena Bollinger, Thomas Bollinger, Jan Rupp, Kensuke Shima, Natalie Gross, Laura Padayachy, Rachel Chicheportiche, Gisella L Puga Yung, Jörg Dieter Seebach
Annexin V expression on CD4+ T cells with regulatory function. Immunology 159 (2) (2019)
Dirk Friedrich, Dorinja Zapf, Björn Lohse, Roger A Fecher, George S Deepe, Jan Rupp
The HIF-1α/LC3-II Axis Impacts Fungal Immunity in Human Macrophages. Infection and immunity 87 (7) (2019)
Kensuke Shima, Maximilian Wanker, Rachel J Skilton, Lesley T Cutcliffe, Christiane Schnee, Thomas A Kohl, Stefan Niemann, Javier Geijo, Matthias Klinger, Peter Timms, Thomas Rattei, Konrad Sachse, Ian N Clarke, Jan Rupp
The Genetic Transformation of Chlamydia pneumoniae. mSphere 3 (5) (2018)
Simon Graspeuntner, Nathalie Loeper, Sven Künzel, John F Baines, Jan Rupp
Selection of validated hypervariable regions is crucial in 16S-based microbiota studies of the female genital tract. Scientific reports 8 (1) (2018)
Simon Graspeuntner, Michael K Bohlmann, Kathrin Gillmann, Runa Speer, Sven Kuenzel, Heike Mark, Friederike Hoellen, Reinhard Lettau, Georg Griesinger, Inke R König, John F Baines, Jan Rupp
Microbiota-based analysis reveals specific bacterial traits and a novel strategy for the diagnosis of infectious infertility. PloS one 13 (1) (2018)
Misa Hirose, Paul Schilf, Yask Gupta, Kim Zarse, Axel Künstner, Anke Fähnrich, Hauke Busch, Junping Yin, Marvin N Wright, Andreas Ziegler, Marie Vallier, Meriem Belheouane, John F Baines, Diethard Tautz, Kornelia Johann, Rebecca Oelkrug, Jens Mittag, Hendrik Lehnert, Alaa Othman, Olaf Jöhren, Markus Schwaninger, Cornelia Prehn, Jerzy Adamski, Kensuke Shima, Jan Rupp, Robert Häsler, Georg Fuellen, Rüdiger Köhling, Michael Ristow, Saleh M Ibrahim
Low-level mitochondrial heteroplasmy modulates DNA replication, glucose metabolism and lifespan in mice. Scientific reports 8 (1) (2018)
Misa Hirose, Axel Künstner, Paul Schilf, Annika Sünderhauf, Jan Rupp, Olaf Jöhren, Markus Schwaninger, Christian Sina, John F Baines, Saleh M Ibrahim
Mitochondrial gene polymorphism is associated with gut microbial communities in mice. Scientific reports 7 (1) (2017)