John W A Rossen (John Rossen, John W Rossen, J W Rossen)

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 26

Top Topics

Genetic Diversity

Escherichia Coli

Antimicrobial Resistance

Intensive Care Unit

Top Venues

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Eugenio Mutschler, Tim Roloff, Aitana Neves, Hege Vangstein Aamot, Belén Rodriguez-Sanchez, Mario Ramirez, John W A Rossen, Natacha Couto, Ângela Novais, Benjamin P Howden, Sylvain Brisse, Sandra Reuter, Oliver Nolte, Adrian Egli, Helena M B Seth-Smith, null null
Towards unified reporting of genome sequencing results in clinical microbiology. PeerJ 12 (2024)
Eugenio Mutschler, Tim Roloff, Aitana Neves, Hege Vangstein Aamot, Belén Rodriguez-Sanchez, Mario Ramirez, John W A Rossen, Natacha Couto, Ângela Novais, Benjamin P Howden, Sylvain Brisse, Sandra Reuter, Oliver Nolte, Adrian Egli, Helena M B Seth-Smith, null null
Towards unified reporting of genome sequencing results in clinical microbiology. PeerJ 12 (2024)
Ana Rubio-Garcia, Aldert L Zomer, Ruoshui Guo, John W A Rossen, Jan H van Zeijl, Jaap A Wagenaar, Roosmarijn E C Luiken
Characterising the gut microbiome of stranded harbour seals (Phoca vitulina) in rehabilitation. PloS one 18 (12) (2023)
Leonard Schuele, Hayley Cassidy, Nilay Peker, John W A Rossen, Natacha Couto
Future potential of metagenomics in microbiology laboratories. Expert review of molecular diagnostics 21 (12) (2022)
Soe Yu Naing, Joost Hordijk, Birgitta Duim, Els M Broens, Linda van der Graaf-van Bloois, John W A Rossen, Joris H Robben, Masja Leendertse, Jaap A Wagenaar, Aldert L Zomer
Genomic Investigation of Two Acinetobacter baumannii Outbreaks in a Veterinary Intensive Care Unit in The Netherlands. Pathogens (Basel, Switzerland) 11 (2) (2022)
Wolfram Manuel Brück, Wolfram Manuel Brück, Samaneh Allahyari, John W A Rossen, Razzagh Mahmoudi
Antibiotic Resistance and Molecular Characterization of Cronobacter sakazakii Strains Isolated from Powdered Infant Formula Milk. Foods (Basel, Switzerland) 11 (8) (2022)
Maaike J C van den Beld, John W A Rossen, Noah Evers, Mirjam A M D Kooistra-Smid, Frans A G Reubsaet
MALDI-TOF MS Using a Custom-Made Database, Biomarker Assignment, or Mathematical Classifiers Does Not Differentiate Shigella spp. and Escherichia coli . Microorganisms 10 (2) (2022)
Mathijs J P Theelen, Roosmarijn E C Luiken, Jaap A Wagenaar, Marianne Sloet van Oldruitenborgh-Oosterbaan, John W A Rossen, Aldert L Zomer
The Equine Faecal Microbiota of Healthy Horses and Ponies in The Netherlands: Impact of Host and Environmental Factors. Animals : an open access journal from MDPI 11 (6) (2021)
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella, Catherine D Carrillo, Alessandro Cestaro, Kok Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L Kay, Jean-Yves Madec, Alison E Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John W A Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M Weber, Henrik Westh, Alexandre Angers-Loustau
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing. F1000Research 10 (2021)
Wolfram Manuel Brück, Wolfram Manuel Brück, John W A Rossen
Virulence Factors of Enteric Pathogenic Escherichia coli: A Review. International journal of molecular sciences 22 (18) (2021)
Leonard Schuele, Erley Lizarazo-Forero, Katrin Strutzberg-Minder, Sabine Schütze, Sandra Löbert, Claudia Lambrecht, Jürgen Harlizius, Alex W Friedrich, Silke Peter, John W A Rossen, Natacha Couto
Application of shotgun metagenomics sequencing and targeted sequence capture to detect circulating porcine viruses in the Dutch-German border region. Transboundary and emerging diseases (2021)
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella, Catherine D Carrillo, Alessandro Cestaro, Kok Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L Kay, Jean-Yves Madec, Alison E Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John W A Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M Weber, Henrik Westh, Alexandre Angers-Loustau
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing. F1000Research 10 (2021)
Ilse Verburg, H Pieter J van Veelen, Karola Waar, John W A Rossen, Alex W Friedrich, Lucia Hernández Leal, Silvia García-Cobos, Heike Schmitt
Effects of Clinical Wastewater on the Bacterial Community Structure from Sewage to the Environment. Microorganisms 9 (4) (2021)
Maarten J Gilbert, Lonneke L IJsseldijk, Ana Rubio-García, Andrea Gröne, Birgitta Duim, John W A Rossen, Aldert L Zomer, Jaap A Wagenaar
After the bite: bacterial transmission from grey seals (Halichoerus grypus) to harbour porpoises (Phocoena phocoena). Royal Society open science 7 (5) (2020)
A J H Cremers, J P M Coolen, C P Bleeker-Rovers, A D J van der Geest-Blankert, D Haverkate, H Hendriks, S S V Henriet, M A Huynen, E Kolwijck, D Liem, W J G Melchers, John W A Rossen, J Zoll, A van Heijst, J Hopman, H F L Wertheim
Surveillance-embedded genomic outbreak resolution of methicillin-susceptible Staphylococcus aureus in a neonatal intensive care unit. Scientific reports 10 (1) (2020)
Leonard Schuele, Hayley Cassidy, Erley Lizarazo, Katrin Strutzberg-Minder, Sabine Schuetze, Sandra Loebert, Claudia Lambrecht, Juergen Harlizius, Alex W Friedrich, Silke Peter, Hubert G M Niesters, John W A Rossen, Natacha Couto
Assessment of Viral Targeted Sequence Capture Using Nanopore Sequencing Directly from Clinical Samples. Viruses 12 (12) (2020)
Alex van Belkum, Carey-Ann D Burnham, John W A Rossen, Frederic Mallard, Olivier Rochas, William Michael Dunne
Innovative and rapid antimicrobial susceptibility testing systems. Nature reviews. Microbiology 18 (5) (2020)
Katarina Benulič, Mateja Pirš, Natacha Couto, Monika Chlebowicz, John W A Rossen, Tomaž Mark Zorec, Katja Seme, Mario Poljak, Tatjana Lejko Zupanc, Eva Ružić-Sabljić, Tjaša Cerar Kišek
Whole genome sequencing characterization of Slovenian carbapenem-resistant Klebsiella pneumoniae, including OXA-48 and NDM-1 producing outbreak isolates. PloS one 15 (4) (2020)
Matthias I Gröschel, Conor Joseph Meehan, Ivan Barilar, Margo Diricks, Aitor Gonzaga, Matthias Steglich, Oscar Conchillo-Solé, Isabell-Christin Scherer, Uwe Mamat, Christian Friedemann Luz, Katrien De Bruyne, Christian Utpatel, Daniel Yero, Isidre Gibert, Xavier Daura, Stefanie Kampmeier, Nurdyana Abdul Rahman, Michael Kresken, Tjip S van der Werf, Ifey Alio, Wolfgang J Streit, Kai Zhou, Thomas Schwartz, John W A Rossen, Maha Reda Farhat, Ulrich E Schaible, Ulrich Nübel, Jan Rupp, Joerg Steinmann, Stefan Niemann, Thomas Andreas Kohl
The phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia. Nature communications 11 (1) (2020)
Sabine Schuster, Jürgen A Bohnert, Martina Vavra, John W A Rossen, Winfried V Kern
Proof of an Outer Membrane Target of the Efflux Inhibitor Phe-Arg-β-Naphthylamide from Random Mutagenesis. Molecules (Basel, Switzerland) 24 (3) (2019)
Natacha Couto, Leonard Schuele, Erwin C Raangs, Miguel P Machado, Catarina I Mendes, Tiago F Jesus, Monika Chlebowicz, Sigrid Rosema, Mário Ramirez, João A Carriço, Ingo B Autenrieth, Alex W Friedrich, Silke Peter, John W A Rossen
Author Correction: Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens. Scientific reports 9 (1) (2019)
Anna Gomes, Marleen van Oosten, Kasper L B Bijker, Kathleen E Boiten, Elisa N Salomon, Sigrid Rosema, John W A Rossen, Ehsan Natour, Yvonne L Douglas, Greetje A Kampinga, Sander van Assen, Bhanu Sinha
Sonication of heart valves detects more bacteria in infective endocarditis. Scientific reports 8 (1) (2018)
Rocío Colello, Alejandra Krüger, José Alejandro Di Conza, John W A Rossen, Alexander W Friedrich, Gabriel Gutkind, Analía I Etcheverría, Nora L Padola
Antimicrobial Resistance in Class 1 Integron-Positive Shiga Toxin-Producing Escherichia coli Isolated from Cattle, Pigs, Food and Farm Environment. Microorganisms 6 (4) (2018)
Alexandre Angers-Loustau, Mauro Petrillo, Johan Bengtsson-Palme, Thomas Berendonk, Burton Blais, Kok Gan Chan, Teresa M Coque, Paul Hammer, Stefanie Heß, Dafni M Kagkli, Carsten Krumbiegel, Val F Lanza, Jean-Yves Madec, Thierry Naas, Justin O'Grady, Valentina Paracchini, John W A Rossen, Etienne Ruppé, Jessica Vamathevan, Vittorio Venturi, Guy Van den Eede
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies. F1000Research (2018)
Natacha Couto, Leonard Schuele, Erwin C Raangs, Miguel P Machado, Catarina I Mendes, Tiago F Jesus, Monika Chlebowicz, Sigrid Rosema, Mário Ramirez, João A Carriço, Ingo B Autenrieth, Alex W Friedrich, Silke Peter, John W A Rossen
Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens. Scientific reports 8 (1) (2018)
Giuseppe Fleres, Natacha Couto, Mariette Lokate, Luc W M van der Sluis, Christophe Ginevra, Sophie Jarraud, Ruud H Deurenberg, John W A Rossen, Silvia García-Cobos, Alex W Friedrich
Detection of Legionella Anisa in Water from Hospital Dental Chair Units and Molecular Characterization by Whole-Genome Sequencing. Microorganisms 6 (3) (2018)