Jason E McDermott (Jason E Mcdermott)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 25

Top Venues

Journal of proteome research

Nature microbiology

PLoS computational biology

eLife

Oregon Health & Science University

Oregon Health & Science University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Oregon Health & Science University Jul 01 2014

United States

Adjunct Assistant Professor :: Molecular Microbiology and Immunology

Pacific Northwest National Laboratory Oct 01 2006

United States

Team Lead :: Computational Biology

Education History

Oregon Health & Science University

United States

PHD :: Molecular Microbiology and Immunology

Publications

David Geller-McGrath, Kishori M Konwar, Virginia P Edgcomb, Maria Pachiadaki, Jack W Roddy, Travis J Wheeler, Jason E McDermott
Predicting metabolic modules in incomplete bacterial genomes with MetaPathPredict. eLife 13 (2024)
Jason E McDermott, Jon M Jacobs, Nathaniel J Merrill, Hugh D Mitchell, Osama A Arshad, Ryan McClure, Justin Teeguarden, Rajendra P Gajula, Kenneth I Porter, Brieann C Satterfield, Kirsie R Lundholm, Debra J Skene, Shobhan Gaddameedhi, Hans P A Van Dongen
Molecular-Level Dysregulation of Insulin Pathways and Inflammatory Processes in Peripheral Blood Mononuclear Cells by Circadian Misalignment. Journal of proteome research 23 (5) (2024)
Emily B Graham, Antonio Pedro Camargo, Ruonan Wu, Russell Y Neches, Matt Nolan, David Paez-Espino, Nikos C Kyrpides, Janet K Jansson, Jason E McDermott, Kirsten S Hofmockel, null null
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nature microbiology 9 (7) (2024)
David Geller-McGrath, Kishori M Konwar, Virginia P Edgcomb, Maria Pachiadaki, Jack W Roddy, Travis J Wheeler, Jason E McDermott
Predicting metabolic modules in incomplete bacterial genomes with MetaPathPredict. eLife 13 (2024)
Emily B Graham, Antonio Pedro Camargo, Ruonan Wu, Russell Y Neches, Matt Nolan, David Paez-Espino, Nikos C Kyrpides, Janet K Jansson, Jason E McDermott, Kirsten S Hofmockel, null null
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nature microbiology 9 (7) (2024)
Jason E McDermott, Jon M Jacobs, Nathaniel J Merrill, Hugh D Mitchell, Osama A Arshad, Ryan McClure, Justin Teeguarden, Rajendra P Gajula, Kenneth I Porter, Brieann C Satterfield, Kirsie R Lundholm, Debra J Skene, Shobhan Gaddameedhi, Hans P A Van Dongen
Molecular-Level Dysregulation of Insulin Pathways and Inflammatory Processes in Peripheral Blood Mononuclear Cells by Circadian Misalignment. Journal of proteome research (2024)
Emily B Graham, Antonio Pedro Camargo, Ruonan Wu, Russell Y Neches, Matt Nolan, David Paez-Espino, Nikos C Kyrpides, Janet K Jansson, Jason E McDermott, Kirsten S Hofmockel, null null
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nature microbiology 9 (7) (2024)
Emily B Graham, Antonio Pedro Camargo, Ruonan Wu, Russell Y Neches, Matt Nolan, David Paez-Espino, Nikos C Kyrpides, Janet K Jansson, Jason E McDermott, Kirsten S Hofmockel, null null
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nature microbiology 9 (7) (2024)
Emily B Graham, Antonio Pedro Camargo, Ruonan Wu, Russell Y Neches, Matt Nolan, David Paez-Espino, Nikos C Kyrpides, Janet K Jansson, Jason E McDermott, Kirsten S Hofmockel, null null
A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nature microbiology (2024)
David Geller-McGrath, Kishori M Konwar, Virginia P Edgcomb, Maria Pachiadaki, Jack W Roddy, Travis J Wheeler, Jason E McDermott
Predicting metabolic modules in incomplete bacterial genomes with MetaPathPredict. eLife 13 (2024)
Jason E McDermott, Jon M Jacobs, Nathaniel J Merrill, Hugh D Mitchell, Osama A Arshad, Ryan McClure, Justin Teeguarden, Rajendra P Gajula, Kenneth I Porter, Brieann C Satterfield, Kirsie R Lundholm, Debra J Skene, Shobhan Gaddameedhi, Hans P A Van Dongen
Molecular-Level Dysregulation of Insulin Pathways and Inflammatory Processes in Peripheral Blood Mononuclear Cells by Circadian Misalignment. Journal of proteome research 23 (5) (2024)
Jason E McDermott, Jon M Jacobs, Nathaniel J Merrill, Hugh D Mitchell, Osama A Arshad, Ryan McClure, Justin Teeguarden, Rajendra P Gajula, Kenneth I Porter, Brieann C Satterfield, Kirsie R Lundholm, Debra J Skene, Shobhan Gaddameedhi, Hans P A Van Dongen
Molecular-Level Dysregulation of Insulin Pathways and Inflammatory Processes in Peripheral Blood Mononuclear Cells by Circadian Misalignment. Journal of proteome research (2024)
Ruonan Wu, Michelle R Davison, William C Nelson, Montana L Smith, Mary S Lipton, Janet K Jansson, Ryan S McClure, Jason E McDermott, Kirsten S Hofmockel
Hi-C metagenome sequencing reveals soil phage-host interactions. Nature communications 14 (1) (2023)
Christine H Chang, William C Nelson, Abby Jerger, Aaron T Wright, Robert G Egbert, Jason E McDermott
Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding. Bioinformatics advances 3 (1) (2023)
Christine H Chang, William C Nelson, Abby Jerger, Aaron T Wright, Robert G Egbert, Jason E McDermott
Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding. Bioinformatics advances 3 (1) (2023)
Nathaniel J Merrill, William Sean Davidson, Yi He, Ivo Díaz Ludovico, Snigdha Sarkar, Madelyn R Berger, Jason E McDermott, Linda J Van Eldik, Donna M Wilcock, Matthew E Monroe, Jennifer E Kyle, Kimberley D Bruce, Jay W Heinecke, Tomas Vaisar, Jacob Raber, Joseph F Quinn, John T Melchior
Human cerebrospinal fluid contains diverse lipoprotein subspecies enriched in proteins implicated in central nervous system health. Science advances 9 (35) (2023)
Ruonan Wu, Clyde A Smith, Garry W Buchko, Ian K Blaby, David Paez-Espino, Nikos C Kyrpides, Yasuo Yoshikuni, Jason E McDermott, Kirsten S Hofmockel, John R Cort, Janet K Jansson
Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase. Nature communications 13 (1) (2022)
Ruonan Wu, Michelle R Davison, Yuqian Gao, Carrie D Nicora, Jason E McDermott, Kristin E Burnum-Johnson, Kirsten S Hofmockel, Janet K Jansson
Moisture modulates soil reservoirs of active DNA and RNA viruses. Communications biology 4 (1) (2021)
Bala S C Koritala, Kenneth I Porter, Osama A Arshad, Rajendra P Gajula, Hugh D Mitchell, Tarana Arman, Mugimane G Manjanatha, Justin Teeguarden, Hans P A Van Dongen, Jason E McDermott, Shobhan Gaddameedhi
Night shift schedule causes circadian dysregulation of DNA repair genes and elevated DNA damage in humans. Journal of pineal research 70 (3) (2021)
Vincent Danna, Hugh Mitchell, Lindsey Anderson, Iobani Godinez, Sara J C Gosline, Justin Teeguarden, Jason E McDermott
leapR: An R Package for Multiomic Pathway Analysis. Journal of proteome research 20 (4) (2021)
John S Tregoning, Jason E McDermott
Ten Simple Rules to becoming a principal investigator. PLoS computational biology 16 (2) (2020)
Ryan S McClure, Jason P Wendler, Joshua N Adkins, Jesica Swanstrom, Ralph Baric, Brooke L Deatherage Kaiser, Kristie L Oxford, Katrina M Waters, Jason E McDermott
Unified feature association networks through integration of transcriptomic and proteomic data. PLoS computational biology 15 (9) (2019)
Sean M Colby, Ryan S McClure, Christopher C Overall, Ryan S Renslow, Jason E McDermott
Improving network inference algorithms using resampling methods. BMC bioinformatics 19 (1) (2018)
Jason E McDermott, Matthew Partridge, Yana Bromberg
Ten simple rules for drawing scientific comics. PLoS computational biology 14 (1) (2018)
Thomas Duhen, Rebekka Duhen, Ryan Montler, Jake Moses, Tarsem Moudgil, Noel F de Miranda, Cheri P Goodall, Tiffany C Blair, Bernard A Fox, Jason E McDermott, Shu-Ching Chang, Gary Grunkemeier, Rom Leidner, Richard Bryan Bell, Andrew D Weinberg
Co-expression of CD39 and CD103 identifies tumor-reactive CD8 T cells in human solid tumors. Nature communications 9 (1) (2018)

Jason E McDermott.css-eqlu8i{font-size:small;padding-left:4px;} (Jason E Mcdermott)

Publication Activity (10 Years)

Top Topics

Top Venues

Jason E McDermott (Jason E Mcdermott)