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Joao B Xavier (Joao Xavier, J B Xavier)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 17

Top Venues

PLoS computational biology

Scientific data

Nature communications

Cancer research

Instituto de Tecnologia Química e Biológica (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Instituto de Tecnologia Química e Biológica Jan 1o 1999 - Feb 6o 2003

Portugal

PHD

Publications

Deepti Mathur, Chen Liao, Wendy Lin, Alessandro La Ferlita, Salvatore Alaimo, Samuel R Taylor, Yi Zhong, Christine A Iacobuzio-Donahue, Alfredo Ferro, Joao B Xavier
The ratio of key metabolic transcripts is a predictive biomarker of breast cancer metastasis to the lung. Cancer research (2023)
Joao B Xavier
Machine learning of cellular metabolic rewiring. bioRxiv : the preprint server for biology (2023)
Ana Djukovic, María José Garzón, Cécile Canlet, Vitor Cabral, Rym Lalaoui, Marc García-Garcerá, Julia Woortman, Marie Tremblay-Franco, Iván Peñaranda, Leonor Puchades-Carrasco, Antonio Pineda-Lucena, Eva María González-Barberá, Miguel Salavert, José Luis López-Hontangas, Miguel Angel Sanz, Jaime Sanz, Bernhard Kuster, Jean-Marc Rolain, Laurent Debrauwer, Karina B Xavier, Joao B Xavier, Carles Ubeda
Lactobacillus supports Clostridiales to restrict gut colonization by multidrug-resistant Enterobacteriaceae. Nature communications 13 (1) (2022)
Hongbin Liu, Chen Liao, Lu Wu, Jinhui Tang, Junyu Chen, Chaobi Lei, Linggang Zheng, Chenhong Zhang, Yang-Yu Liu, Joao B Xavier, Lei Dai
Ecological dynamics of the gut microbiome in response to dietary fiber. The ISME journal 16 (8) (2022)
Hilary Monaco, Kevin S Liu, Tiago Sereno, Maxime Deforet, Bradford P Taylor, Yanyan Chen, Caleb C Reagor, Joao B Xavier
Spatial-temporal dynamics of a microbial cooperative behavior resistant to cheating. Nature communications 13 (1) (2022)
Jinyuan Yan, Chen Liao, Bradford P Taylor, Emily Fontana, Luigi A Amoretti, Roberta J Wright, Eric R Littmann, Anqi Dai, Nicholas R Waters, Jonathan U Peled, Ying Taur, Miguel-Ángel Perales, Benjamin A Siranosian, Ami S Bhatt, Marcel R M van den Brink, Eric G Pamer, Jonas Schluter, Joao B Xavier
A compilation of fecal microbiome shotgun metagenomics from hematopoietic cell transplantation patients. Scientific data 9 (1) (2022)
Guillem Santamaria, Chen Liao, Chloe Lindberg, Yanyan Chen, Zhe Wang, Kyu Rhee, Francisco Rodrigues Pinto, Jinyuan Yan, Joao B Xavier
Evolution and regulation of microbial secondary metabolism. eLife 11 (2022)
Chen Liao, Bradford P Taylor, Camilla Ceccarani, Emily Fontana, Luigi A Amoretti, Roberta J Wright, Antonio L C Gomes, Jonathan U Peled, Ying Taur, Miguel-Angel Perales, Marcel R M van den Brink, Eric Littmann, Eric G Pamer, Jonas Schluter, Joao B Xavier
Author Correction: Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients. Scientific data 8 (1) (2021)
Chen Liao, Bradford P Taylor, Camilla Ceccarani, Emily Fontana, Luigi A Amoretti, Roberta J Wright, Antonio L C Gomes, Jonathan U Peled, Ying Taur, Miguel-Angel Perales, Marcel R M van den Brink, Eric Littmann, Eric G Pamer, Jonas Schluter, Joao B Xavier
Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients. Scientific data 8 (1) (2021)
Thierry Rolling, Bing Zhai, Mergim Gjonbalaj, Nicholas Tosini, Keiko Yasuma-Mitobe, Emily Fontana, Luigi A Amoretti, Roberta J Wright, Doris M Ponce, Miguel-Ángel Perales, Joao B Xavier, Marcel R M van den Brink, Kate A Markey, Jonathan U Peled, Ying Taur, Tobias M Hohl
Haematopoietic cell transplantation outcomes are linked to intestinal mycobiota dynamics and an expansion of Candida parapsilosis complex species. Nature microbiology 6 (12) (2021)
Christoph K Stein-Thoeringer, Katherine Nichols, A Lazrak, Melissa Docampo, A E Slingerland, J B Slingerland, A G Clurman, G Armijo, Antonio L C Gomes, Yusuke Shono, Anna Staffas, Marina Burgos da Silva, S M Devlin, Kate A Markey, D Bajic, R Pinedo, A Tsakmaklis, Eric R Littmann, Alessandro Pastore, Ying Taur, Sebastien Monette, M E Arcila, A J Pickard, M Maloy, Roberta J Wright, Luigi A Amoretti, E Fontana, Dung Pham, M A Jamal, D Weber, A D Sung, Daigo Hashimoto, C Scheid, Joao B Xavier, Julia A Messina, K Romero, M Lew, Amy T Bush, Lauren M Bohannon, K Hayasaka, Yuta Hasegawa, M J G T Vehreschild, J R Cross, D M Ponce, Miguel-Ángel Perales, Sergio A Giralt, Robert R Jenq, Takanori Teshima, E Holler, Nelson J Chao, Eric G Pamer, Jonathan U Peled, Marcel R M van den Brink
Lactose drives Enterococcus expansion to promote graft-versus-host disease. Science (New York, N.Y.) 366 (6469) (2020)
Chen Liao, Tong Wang, Sergei Maslov, Joao B Xavier
Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence. PLoS computational biology 16 (8) (2020)
Chen Liao, Joao B Xavier, Zhenduo Zhu
Enhanced inference of ecological networks by parameterizing ensembles of population dynamics models constrained with prior knowledge. BMC ecology 20 (1) (2020)
Jonas Schluter, Jonathan U Peled, Bradford P Taylor, Kate A Markey, Melody Smith, Ying Taur, Rene Niehus, Anna Staffas, Anqi Dai, Emily Fontana, Luigi A Amoretti, Roberta J Wright, Sejal Morjaria, Maly Fenelus, Melissa S Pessin, Nelson J Chao, Meagan Lew, Lauren Bohannon, Amy Bush, Anthony D Sung, Tobias M Hohl, Miguel-Ángel Perales, Marcel R M van den Brink, Joao B Xavier
The gut microbiota is associated with immune cell dynamics in humans. Nature 588 (7837) (2020)
Tyler A Joseph, Liat Shenhav, Joao B Xavier, Eran Halperin, Itsik Pe'er
Compositional Lotka-Volterra describes microbial dynamics in the simplex. PLoS computational biology 16 (5) (2020)
Jinyuan Yan, Henri Estanbouli, Chen Liao, Wook Kim, Jonathan M Monk, Rayees Rahman, Mini Kamboj, Bernhard O Palsson, Wei-Gang Qiu, Joao B Xavier
Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection. PLoS computational biology 15 (12) (2019)
Jinyuan Yan, Maxime Deforet, Kerry E Boyle, Rayees Rahman, Raymond Liang, Chinweike Okegbe, Lars E P Dietrich, Wei-Gang Qiu, Joao B Xavier
Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network. PLoS computational biology 13 (8) (2017)

Joao B Xavier.css-eqlu8i{font-size:small;padding-left:4px;} (Joao Xavier, J B Xavier)

Publication Activity (10 Years)

Top Topics

Top Venues

Joao B Xavier (Joao Xavier, J B Xavier)