Jochen Weile

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 13

Top Venues

Bioinformatics (Oxford, England)

bioRxiv : the preprint server for biology

Molecular systems biology

Human genetics

Terrence Donnelly Centre for Cellular and Biomolecular Research

University of Toronto (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Terrence Donnelly Centre for Cellular and Biomolecular Research Sep 01 2017

Canada

Postdoctoral Fellow

Newcastle University - Sep 01 2011

United Kingdom

Research Assistant :: Computer Science

Rothamsted Research

United Kingdom

Bioinformatics Scientist :: Biomathematics and Bioinformatics

Education History

University of Toronto Sep 01 2011 - Nov 09 2017

Canada

PHD :: Molecular Genetics

Universität Bielefeld Technische Fakultät Sep 01 2006 - Sep 01 2008

Germany

MSC :: Bioinformatics and Genome Research

Universität Bielefeld Technische Fakultät Sep 01 2003 - Sep 01 2006

Germany

BSC :: Bioinformatics and Genome Research

Publications

Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara Amorosi, Chiann-Ling C Yeh, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M Fowler, Maitreya J Dunham, Frederick P Roth
Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries. Bioinformatics (Oxford, England) 40 (4) (2024)
Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara Amorosi, Chiann-Ling C Yeh, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M Fowler, Maitreya J Dunham, Frederick P Roth
Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries. Bioinformatics (Oxford, England) 40 (4) (2024)
Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara Amorosi, Chiann-Ling C Yeh, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M Fowler, Maitreya J Dunham, Frederick P Roth
Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries. Bioinformatics (Oxford, England) 40 (4) (2024)
Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara Amorosi, Chiann-Ling C Yeh, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M Fowler, Maitreya J Dunham, Frederick P Roth
Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries. Bioinformatics (Oxford, England) 40 (4) (2024)
Jochen Weile, Gabrielle Ferra, Gabriel Boyle, Sriram Pendyala, Clara Amorosi, Chiann-Ling C Yeh, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Douglas M Fowler, Maitreya J Dunham, Frederick P Roth
Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries. Bioinformatics (Oxford, England) 40 (4) (2024)
Jochen Weile, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Frederick P Roth
Pacybara: Accurate long-read sequencing for barcoded mutagenized allelic libraries. bioRxiv : the preprint server for biology (2023)
Jochen Weile, Atina G Cote, Nishka Kishore, Daniel Tabet, Warren van Loggerenberg, Ashyad Rayhan, Frederick P Roth
Pacybara: Accurate long-read sequencing for barcoded mutagenized allelic libraries. bioRxiv : the preprint server for biology (2023)
Warren van Loggerenberg, Shahin Sowlati-Hashjin, Jochen Weile, Rayna Hamilton, Aditya Chawla, Marinella Gebbia, Nishka Kishore, Laure Frésard, Sami Mustajoki, Elena Pischik, Elena Di Pierro, Michela Barbaro, Ylva Floderus, Caroline Schmitt, Laurent Gouya, Alexandre Colavin, Robert Nussbaum, Edith C H Friesema, Raili Kauppinen, Jordi To-Figueras, Aasne K Aarsand, Robert J Desnick, Michael Garton, Frederick P Roth
Systematically testing human HMBS missense variants to reveal mechanism and pathogenic variation. bioRxiv : the preprint server for biology (2023)
Warren van Loggerenberg, Shahin Sowlati-Hashjin, Jochen Weile, Rayna Hamilton, Aditya Chawla, Marinella Gebbia, Nishka Kishore, Laure Frésard, Sami Mustajoki, Elena Pischik, Elena Di Pierro, Michela Barbaro, Ylva Floderus, Caroline Schmitt, Laurent Gouya, Alexandre Colavin, Robert Nussbaum, Edith C H Friesema, Raili Kauppinen, Jordi To-Figueras, Aasne K Aarsand, Robert J Desnick, Michael Garton, Frederick P Roth
Systematically testing human HMBS missense variants to reveal mechanism and pathogenic variation. bioRxiv : the preprint server for biology (2023)
Jolanda van Leeuwen, Carles Pons, Guihong Tan, Jason Zi Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone
Systematic analysis of bypass suppression of essential genes. Molecular systems biology 16 (9) (2021)
Jochen Weile, Frederick P Roth
Multiplexed assays of variant effects contribute to a growing genotype-phenotype atlas. Human genetics 137 (9) (2018)
J Javier Díaz-Mejía, Albi Celaj, Joseph C Mellor, Atina Coté, Attila Balint, Brandon Ho, Pritpal Bansal, Fatemeh Shaeri, Marinella Gebbia, Jochen Weile, Marta Verby, Anna Karkhanina, YiFan Zhang, Cassandra Wong, Justin Rich, D'Arcy Prendergast, Gaurav Gupta, Sedide Öztürk, Daniel Durocher, Grant W Brown, Frederick P Roth
Mapping DNA damage-dependent genetic interactions in yeast via party mating and barcode fusion genetics. Molecular systems biology 14 (5) (2018)
Jochen Weile, Song Sun, Atina G Cote, Jennifer Knapp, Marta Verby, Joseph C Mellor, Yingzhou Wu, Carles Pons, Cassandra Wong, Natascha van Lieshout, Fan Yang, Murat Tasan, Guihong Tan, Shan Yang, Douglas M Fowler, Robert Nussbaum, Jesse D Bloom, Marc Vidal, David E Hill, Patrick Aloy, Frederick P Roth
A framework for exhaustively mapping functional missense variants. Molecular systems biology 13 (12) (2017)

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Publication Activity (10 Years)

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Jochen Weile