Jonathan Michael Irish (Jonathan M Irish, Jonathan Irish)

ResearcherID Scopus Author ID Scopus Author ID Loop profile Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 43

Top Venues

bioRxiv : the preprint server for biology

Seminars in immunopathology

Cytometry. Part B, Clinical cytometry

Nature communications

Vanderbilt University

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Vanderbilt University Dec 01 2011

United States

Assistant Professor :: Cancer Biology

Stanford University Apr 01 2009 - Dec 01 2011

United States

Instructor :: Oncology, Hematology Division

Stanford University Apr 01 2004 - Mar 31 2009

United States

Postdoctoral Fellow :: Oncology, Hematology division

Education History

Stanford University Aug 01 1998 - Mar 31 2004

United States

PHD :: Cancer Biology

University of Michigan Aug 01 1994 - Jul 31 1998

United States

BSC :: Biology, Biochemistry, Chemistry

Publications

Kelsey Voss, Todd Bartkowiak, Allison E Sewell, Channing Chi, Madelyn D Landis, Samuel G Schaefer, Heather H Pua, James A Connelly, Jonathan Michael Irish, Jeffrey C Rathmell, Saara Kaviany
Peripheral T Cell Development and Immunophenotyping of Twins with Heterozygous FOXN1 Mutations. ImmunoHorizons 8 (7) (2024)
Stephanie Medina, Asa A Brockman, Claire E Cross, Madeline J Hayes, Bret C Mobley, Akshitkumar M Mistry, Silky Chotai, Kyle D Weaver, Reid C Thompson, Lola B Chambless, Rebecca A Ihrie, Jonathan Michael Irish
IL-8 Instructs Macrophage Identity in Lateral Ventricle Contacting Glioblastoma. bioRxiv : the preprint server for biology (2024)
Kelsey Voss, Todd Bartkowiak, Allison E Sewell, Channing Chi, Madelyn D Landis, Samuel G Schaefer, Heather H Pua, James A Connelly, Jonathan Michael Irish, Jeffrey C Rathmell, Saara Kaviany
Peripheral T Cell Development and Immunophenotyping of Twins with Heterozygous FOXN1 Mutations. ImmunoHorizons 8 (7) (2024)
Hannah L Thirman, Madeline J Hayes, Lauren E Brown, John A Porco, Jonathan Michael Irish
Single Cell Profiling Distinguishes Leukemia-Selective Chemotypes. bioRxiv : the preprint server for biology (2024)
Hannah L Thirman, Madeline J Hayes, Lauren E Brown, John A Porco, Jonathan Michael Irish
Single Cell Profiling Distinguishes Leukemia-Selective Chemotypes. bioRxiv : the preprint server for biology (2024)
Stephanie Medina, Asa A Brockman, Claire E Cross, Madeline J Hayes, Bret C Mobley, Akshitkumar M Mistry, Silky Chotai, Kyle D Weaver, Reid Thompson, Lola B Chambless, Rebecca A Ihrie, Jonathan Michael Irish
IL-8 Instructs Macrophage Identity in Lateral Ventricle Contacting Glioblastoma. bioRxiv : the preprint server for biology (2024)
Kelsey Voss, Todd Bartkowiak, Allison E Sewell, Channing Chi, Madelyn D Landis, Samuel G Schaefer, Heather H Pua, James A Connelly, Jonathan Michael Irish, Jeffrey C Rathmell, Saara Kaviany
Peripheral T Cell Development and Immunophenotyping of Twins with Heterozygous FOXN1 Mutations. ImmunoHorizons 8 (7) (2024)
Hannah L Thirman, Madeline J Hayes, Lauren E Brown, John A Porco, Jonathan Michael Irish
Single Cell Profiling Distinguishes Leukemia-Selective Chemotypes. bioRxiv : the preprint server for biology (2024)
Stephanie Medina, Asa A Brockman, Claire E Cross, Madeline J Hayes, Bret C Mobley, Akshitkumar M Mistry, Silky Chotai, Kyle D Weaver, Reid C Thompson, Lola B Chambless, Rebecca A Ihrie, Jonathan Michael Irish
IL-8 Instructs Macrophage Identity in Lateral Ventricle Contacting Glioblastoma. bioRxiv : the preprint server for biology (2024)
Claire E Cross, Cass Mayeda, Stephanie Medina, Madeline J Hayes, Saara Kaviany, James A Connelly, Jeffrey C Rathmell, Kyle D Weaver, Reid C Thompson, Lola B Chambless, Rebecca A Ihrie, Jonathan Michael Irish
Velociraptor: Cross-Platform Quantitative Search Using Hallmark Cell Features. bioRxiv : the preprint server for biology (2024)
Asa A Brockman, Rohit Khurana, Todd Bartkowiak, Portia L Thomas, Shamilene Sivagnanam, Courtney B Betts, Lisa M Coussens, Christine M Lovly, Jonathan Michael Irish, Rebecca A Ihrie
Alignment, segmentation and neighborhood analysis in cyclic immunohistochemistry data using CASSATT. Cytometry. Part B, Clinical cytometry (2023)
Maria-Fernanda Senosain, Yong Zou, Khushbu Patel, Shilin Zhao, Alexis Coullomb, Dianna J Rowe, Jonathan M Lehman, Jonathan Michael Irish, Fabien Maldonado, Michael N Kammer, Vera Pancaldi, Carlos F Lopez
Integrated Multi-omics Analysis of Early Lung Adenocarcinoma Links Tumor Biological Features with Predicted Indolence or Aggressiveness. Cancer research communications 3 (7) (2023)
Laura C Geben, Asa A Brockman, Mary Bronwen L Chalkley, Serena R Sweet, Julia E Gallagher, Alexandra L Scheuing, Richard B Simerly, Kevin C Ess, Jonathan Michael Irish, Rebecca A Ihrie
Dephosphorylation of 4EBP1/2 Induces Prenatal Neural Stem Cell Quiescence. bioRxiv : the preprint server for biology (2023)
Laura C Geben, Asa A Brockman, Mary Bronwen L Chalkley, Serena R Sweet, Julia E Gallagher, Alexandra L Scheuing, Richard B Simerly, Kevin C Ess, Jonathan Michael Irish, Rebecca A Ihrie
Dephosphorylation of 4EBP1/2 Induces Prenatal Neural Stem Cell Quiescence. bioRxiv : the preprint server for biology (2023)
Laura C Geben, Asa A Brockman, Mary Bronwen L Chalkley, Serena R Sweet, Julia E Gallagher, Alexandra L Scheuing, Richard B Simerly, Kevin C Ess, Jonathan Michael Irish, Rebecca A Ihrie
Dephosphorylation of 4EBP1/2 Induces Prenatal Neural Stem Cell Quiescence. bioRxiv : the preprint server for biology (2023)
Asa A Brockman, Rohit Khurana, Todd Bartkowiak, Portia L Thomas, Shamilene Sivagnanam, Courtney B Betts, Lisa M Coussens, Christine M Lovly, Jonathan Michael Irish, Rebecca A Ihrie
Alignment, segmentation and neighborhood analysis in cyclic immunohistochemistry data using CASSATT. Cytometry. Part B, Clinical cytometry (2023)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology 45 (1) (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology 45 (1) (2022)
Kanutte Huse, Baoyan Bai, Vera I Hilden, Lise K Bollum, Thea Kristin Våtsveen, Ludvig A Munthe, Erlend B Smeland, Jonathan Michael Irish, Sébastien Wälchli, June H Myklebust
Mechanism of CD79A and CD79B Support for IgM+ B Cell Fitness through B Cell Receptor Surface Expression. Journal of immunology (Baltimore, Md. : 1950) 209 (10) (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology (2022)
Kevin J Kramer, Erin M Wilfong, Kelsey Voss, Sierra M Barone, Andrea R Shiakolas, Nagarajan Raju, Caroline E Roe, Naveen Chandra Suryadevara, Lauren M Walker, Steven C Wall, Ariana Paulo, Samuel G Schaefer, Debolanle O Dahunsi, Camille S Westlake, James E Crowe, Robert H Carnahan, Jeffrey C Rathmell, Rachel H Bonami, Ivelin S Georgiev, Jonathan Michael Irish
Single-cell profiling of the antigen-specific response to BNT162b2 SARS-CoV-2 RNA vaccine. Nature communications 13 (1) (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology 45 (1) (2022)
Stephanie Medina, Rebecca A Ihrie, Jonathan Michael Irish
Learning cell identity in immunology, neuroscience, and cancer. Seminars in immunopathology 45 (1) (2022)
Benjamin J Reisman, Sierra M Barone, Brian O Bachmann, Jonathan Michael Irish
DebarcodeR increases fluorescent cell barcoding capacity and accuracy. Cytometry. Part A : the journal of the International Society for Analytical Cytology 99 (9) (2021)
Kevin J Kramer, Erin M Wilfong, Kelsey Voss, Sierra M Barone, Andrea R Shiakolas, Nagarajan Raju, Caroline E Roe, Naveen Chandra Suryadevara, Lauren Walker, Steven C Wall, Ariana Paulo, Samuel Schaefer, Debolanle O Dahunsi, Camille S Westlake, James E Crowe, Robert H Carnahan, Jeffrey C Rathmell, Rachel H Bonami, Ivelin S Georgiev, Jonathan Michael Irish
Single-Cell Profiling of the Antigen-Specific Response to BNT162b2 SARS-CoV-2 RNA Vaccine. bioRxiv : the preprint server for biology (2021)
Albert C Yeh, Antiopi Varelias, Anupama Reddy, Sierra M Barone, Stuart Olver, Kate Chilson, Lynn Onstad, Kathleen S Ensbey, Andrea S Henden, Luke Samson, Carla A Jaeger, Timothy Bi, Kimberly Dahlman, Tae Kon Kim, Ping Zhang, Mariapia A Degli-Esposti, Evan W Newell, Madan Jagasia, Jonathan Michael Irish, Stephanie J Lee, Geoffrey R Hill
CMV exposure drives long-term CD57+ CD4 memory T cell inflation following allogeneic stem cell transplant. Blood (2021)
Sierra M Barone, Alberta G A Paul, Lyndsey M Muehling, Joanne A Lannigan, William Wai-Hung Kwok, Ronald B Turner, Judith A Woodfolk, Jonathan Michael Irish
Unsupervised machine learning reveals key immune cell subsets in COVID-19, rhinovirus infection, and cancer therapy. eLife 10 (2021)
Nalin Leelatian, Justine Sinnaeve, Akshitkumar M Mistry, Sierra M Barone, Asa A Brockman, Kirsten E Diggins, Allison R Greenplate, Kyle D Weaver, Reid C Thompson, Lola B Chambless, Bret C Mobley, Rebecca A Ihrie, Jonathan Michael Irish
Unsupervised machine learning reveals risk stratifying glioblastoma tumor cells. eLife 9 (2020)
Mikael Roussel, Faustine Lhomme, Caroline E Roe, Todd Bartkowiak, Pauline Gravelle, Camille Laurent, Thierry Fest, Jonathan Michael Irish
Mass cytometry defines distinct immune profile in germinal center B-cell lymphomas. Cancer immunology, immunotherapy : CII 69 (3) (2020)
Laura Ferrer-Font, Johannes U Mayer, Samuel Old, Ian F Hermans, Jonathan Michael Irish, Kylie M Price
High-Dimensional Data Analysis Algorithms Yield Comparable Results for Mass Cytometry and Spectral Flow Cytometry Data. Cytometry. Part A : the journal of the International Society for Analytical Cytology 97 (8) (2020)
Gabrielle V Rushing, Asa A Brockman, Madelyn K Bollig, Nalin Leelatian, Bret C Mobley, Jonathan Michael Irish, Kevin C Ess, Cary Fu, Rebecca A Ihrie
Location-dependent maintenance of intrinsic susceptibility to mTORC1-driven tumorigenesis. Life science alliance 2 (2) (2019)
Kanutte Huse, Cara Ellen Wogsland, Hannah G Polikowsky, Kirsten E Diggins, Erlend B Smeland, June Helen Myklebust, Jonathan Michael Irish
Human Germinal Center B Cells Differ from Naïve and Memory B Cells in CD40 Expression and CD40L-Induced Signaling Response. Cytometry. Part A : the journal of the International Society for Analytical Cytology 95 (4) (2019)
Akshitkumar M Mistry, Allison R Greenplate, Rebecca A Ihrie, Jonathan Michael Irish
Beyond the message: advantages of snapshot proteomics with single-cell mass cytometry in solid tumors. The FEBS journal 286 (8) (2019)
David C Earl, P Brent Ferrell, Nalin Leelatian, Jordan T Froese, Benjamin J Reisman, Jonathan Michael Irish, Brian O Bachmann
Discovery of human cell selective effector molecules using single cell multiplexed activity metabolomics. Nature communications 9 (1) (2018)
Allison R Greenplate, Daniel D McClanahan, Brian K Oberholtzer, Deon B Doxie, Caroline E Roe, Kirsten E Diggins, Nalin Leelatian, Megan L Rasmussen, Mark C Kelley, Vivian Gama, Peter J Siska, Jeffrey C Rathmell, P Brent Ferrell, Douglas B Johnson, Jonathan Michael Irish
Computational Immune Monitoring Reveals Abnormal Double-Negative T Cells Present across Human Tumor Types. Cancer immunology research 7 (1) (2018)
Deon Bryant Doxie, Allison R Greenplate, Jocelyn S Gandelman, Kirsten E Diggins, Caroline E Roe, Kimberly B Dahlman, Jeffrey A Sosman, Mark C Kelley, Jonathan Michael Irish
BRAF and MEK inhibitor therapy eliminates Nestin-expressing melanoma cells in human tumors. Pigment cell & melanoma research 31 (6) (2018)
Kirsten E Diggins, Allison R Greenplate, Nalin Leelatian, Cara Ellen Wogsland, Jonathan Michael Irish
Characterizing cell subsets using marker enrichment modeling. Nature methods 14 (3) (2017)
Paul Brent Ferrell, Kirsten Elizabeth Diggins, Hannah Grace Polikowsky, Sanjay Ram Mohan, Adam C Seegmiller, Jonathan Michael Irish
High-Dimensional Analysis of Acute Myeloid Leukemia Reveals Phenotypic Changes in Persistent Cells during Induction Therapy. PloS one 11 (4) (2016)
Nalin Leelatian, Deon B Doxie, Allison R Greenplate, Bret C Mobley, Jonathan M Lehman, Justine Sinnaeve, Rondi M Kauffmann, Jay A Werkhaven, Akshitkumar M Mistry, Kyle D Weaver, Reid C Thompson, Pierre P Massion, Mary A Hooks, Mark C Kelley, Lola B Chambless, Rebecca A Ihrie, Jonathan Michael Irish
Single cell analysis of human tissues and solid tumors with mass cytometry. Cytometry. Part B, Clinical cytometry 92 (1) (2016)
Douglas B Johnson, Monica V Estrada, Roberto Salgado, Violeta Sanchez, Deon B Doxie, Susan R Opalenik, Anna E Vilgelm, Emily Feld, Adam S Johnson, Allison R Greenplate, Melinda E Sanders, Christine M Lovly, Dennie T Frederick, Mark C Kelley, Ann Richmond, Jonathan Michael Irish, Yu Shyr, Ryan J Sullivan, Igor Puzanov, Jeffrey A Sosman, Justin M Balko
Melanoma-specific MHC-II expression represents a tumour-autonomous phenotype and predicts response to anti-PD-1/PD-L1 therapy. Nature communications 7 (2016)
Katherine M Chong, Nalin Leelatian, Sean M Deguire, Asa A Brockman, David Earl, Rebecca A Ihrie, Jonathan Michael Irish, Brian O Bachmann, Gary A Sulikowski
The use of fluorescently-tagged apoptolidins in cellular uptake and response studies. The Journal of antibiotics 69 (4) (2016)
Jonathan Michael Irish
Beyond the age of cellular discovery. Nature immunology 15 (12) (2015)

Jonathan Michael Irish.css-eqlu8i{font-size:small;padding-left:4px;} (Jonathan M Irish, Jonathan Irish)

Publication Activity (10 Years)

Top Topics

Top Venues

Jonathan Michael Irish (Jonathan M Irish, Jonathan Irish)