Jordy P M Coolen

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 19

Top Topics

Intensive Care Unit

Gene Expression

High Throughput Sequencing

Top Venues

Journal of clinical microbiology

Journal of fungi (Basel, Switzerland)

Microbiology spectrum

This page only lists publications with an associated author ORCID identifier.

Publications

Stephan J P Hiel, Amber C A Hendriks, Jos J A Eijkenboom, Thijs Bosch, Jordy P M Coolen, Willem J G Melchers, Paul Anröchte, Simone M T Camps, Paul E Verweij, Jianhua Zhang, Laura van Dommelen
Aspergillus Outbreak in an Intensive Care Unit: Source Analysis with Whole Genome Sequencing and Short Tandem Repeats. Journal of fungi (Basel, Switzerland) 10 (1) (2024)
Bartjan Simmelink, Jordy P M Coolen, Wannes Vogels, Martin Deijs, Jessica L M van der Last-Kempkes, Kah Sing Ng, Siow Foong Chang, Koen Gevers, Liesbeth Harkema, Lia van der Hoek, Ad de Groof
Discovery, Pathogenesis, and Complete Genome Characterization of Lates calcarifer Herpesvirus. Genes 15 (3) (2024)
Bartjan Simmelink, Jordy P M Coolen, Wannes Vogels, Martin Deijs, Jessica L M van der Last-Kempkes, Kah Sing Ng, Siow Foong Chang, Koen Gevers, Liesbeth Harkema, Lia van der Hoek, Ad de Groof
Discovery, Pathogenesis, and Complete Genome Characterization of Lates calcarifer Herpesvirus. Genes 15 (3) (2024)
Bartjan Simmelink, Jordy P M Coolen, Wannes Vogels, Martin Deijs, Jessica L M van der Last-Kempkes, Kah Sing Ng, Siow Foong Chang, Koen Gevers, Liesbeth Harkema, Lia van der Hoek, Ad de Groof
Discovery, Pathogenesis, and Complete Genome Characterization of Lates calcarifer Herpesvirus. Genes 15 (3) (2024)
Stephan J P Hiel, Amber C A Hendriks, Jos J A Eijkenboom, Thijs Bosch, Jordy P M Coolen, Willem J G Melchers, Paul Anröchte, Simone M T Camps, Paul E Verweij, Jianhua Zhang, Laura van Dommelen
Aspergillus Outbreak in an Intensive Care Unit: Source Analysis with Whole Genome Sequencing and Short Tandem Repeats. Journal of fungi (Basel, Switzerland) 10 (1) (2024)
Bartjan Simmelink, Jordy P M Coolen, Wannes Vogels, Martin Deijs, Jessica L M van der Last-Kempkes, Kah Sing Ng, Siow Foong Chang, Koen Gevers, Liesbeth Harkema, Lia van der Hoek, Ad de Groof
Discovery, Pathogenesis, and Complete Genome Characterization of Lates calcarifer Herpesvirus. Genes 15 (3) (2024)
Jodie Anne Schildkraut, Jordy P M Coolen, Heleen Severin, Ellen Koenraad, Nicole Aalders, Willem J G Melchers, Wouter Hoefsloot, Heiman F L Wertheim, Jakko van Ingen
MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care. Journal of clinical microbiology 61 (3) (2023)
Jodie Anne Schildkraut, Jordy P M Coolen, Heleen Severin, Ellen Koenraad, Nicole Aalders, Willem J G Melchers, Wouter Hoefsloot, Heiman F L Wertheim, Jakko van Ingen
MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care. Journal of clinical microbiology (2023)
Sofie C M Tops, Claire E P Schapendonk, Jordy P M Coolen, Fred C Tenover, Isabella A Tickler, Willem J G Melchers, Heiman F L Wertheim
The diagnostic accuracy of the GeneXpert ESBL- ampC prototype assay for rapid PCR-based detection of extended-spectrum beta-lactamase genes directly from urine. Microbiology spectrum (2023)
Tim J H Baltussen, Norman van Rhijn, Jordy P M Coolen, Jan Dijksterhuis, Paul E Verweij, Michael J Bromley, Willem J G Melchers
The C 2 H 2 transcription factor SltA is required for germination and hyphal development in Aspergillus fumigatus . mSphere (2023)
Jodie Anne Schildkraut, Jordy P M Coolen, Heleen Severin, Ellen Koenraad, Nicole Aalders, Willem J G Melchers, Wouter Hoefsloot, Heiman F L Wertheim, Jakko van Ingen
MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care. Journal of clinical microbiology 61 (3) (2023)
Jodie Anne Schildkraut, Jordy P M Coolen, Heleen Severin, Ellen Koenraad, Nicole Aalders, Willem J G Melchers, Wouter Hoefsloot, Heiman F L Wertheim, Jakko van Ingen
MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care. Journal of clinical microbiology 61 (3) (2023)
Simone J C F M Moorlag, Jordy P M Coolen, Bart van den Bosch, Elisabeth Hui-Mei Jin, Jochem B Buil, Heiman F L Wertheim, Willem J G Melchers
Targeting the 16S rRNA Gene by Reverse Complement PCR Next-Generation Sequencing: Specific and Sensitive Detection and Identification of Microbes Directly in Clinical Samples. Microbiology spectrum (2023)
Margriet W J Hokken, Jordy P M Coolen, Hilbert Steenbreker, Jan Zoll, Tim J H Baltussen, Paul E Verweij, Willem J G Melchers
The Transcriptome Response to Azole Compounds in Aspergillus fumigatus Shows Differential Gene Expression across Pathways Essential for Azole Resistance and Cell Survival. Journal of fungi (Basel, Switzerland) 9 (8) (2023)
Thomas J Roodsant, Boas C L Van Der Putten, Jaime Brizuela, Jordy P M Coolen, Tim J H Baltussen, Kim Schipper, Yvonne Pannekoek, Kees C H van der Ark, Constance Schultsz
The streptococcal phase-variable type I restriction modification system SsuCC20p dictates the methylome of Streptococcus suis impacting the transcriptome and virulence in a zebrafish larvae infection model. mBio (2023)
Jodie Anne Schildkraut, Jordy P M Coolen, Sophie Burbaud, Jasper J N Sangen, Michael P Kwint, R Andres Floto, Huub J M Op den Camp, Lindsey H M Te Brake, Heiman F L Wertheim, Kornelia Neveling, Wouter Hoefsloot, Jakko van Ingen
RNA-sequencing elucidates drug-specific mechanisms of antibiotic tolerance and resistance in M. abscessus. Antimicrobial agents and chemotherapy (2021)
Selma L van Esveld, Lisette Meerstein-Kessel, Cas Boshoven, Jochem F Baaij, Konstantin Barylyuk, Jordy P M Coolen, Joeri van Strien, Ronald A J Duim, Bas E Dutilh, Daniel R Garza, Marijn Letterie, Nicholas I Proellochs, Michelle N de Ridder, Prashanna Balaji Venkatasubramanian, Laura E de Vries, Ross Frederick Waller, Taco W A Kooij, Martijn A Huynen
A Prioritized and Validated Resource of Mitochondrial Proteins in Plasmodium Identifies Unique Biology. mSphere 6 (5) (2021)
Fanny Wegner, Tim Roloff, Michael Huber, Samuel Cordey, Alban Ramette, Yannick Gerth, Claire Bertelli, Madlen Stange, Helena M B Seth-Smith, Alfredo Mari, Karoline Leuzinger, Lorenzo Cerutti, Keith Harshman, Ioannis Xenarios, Philippe Le Mercier, Pascal Bittel, Stefan Neuenschwander, Onya Opota, Jonas Fuchs, Marcus Panning, Charlotte Michel, Marie Hallin, Thomas Demuyser, Ricardo De Mendonca, Paul Savelkoul, Jozef Dingemans, Brian M J W van der Veer, Stefan A Boers, Eric C J Claas, Jordy P M Coolen, Willem J G Melchers, Marianne Gunell, Teemu Kallonen, Tytti Vuorinen, Antti J Hakanen, Eva Bernhoff, Marit Andrea Klokkhammer Hetland, Hadar Golan Berman, Sheera Adar, Jacob Moran-Gilad, Dana G Wolf, Stephen L Leib, Oliver Nolte, Laurent Kaiser, Stefan Schmutz, Verena Kufner, Maryam Zaheri, Alexandra Trkola, Hege Vangstein Aamot, Hans H Hirsch, Gilbert Greub, Adrian Egli
External quality assessment of SARS-CoV-2-sequencing: An ESGMD-SSM pilot trial across 15 European laboratories. Journal of clinical microbiology (2021)
Tim J H Baltussen, Jordy P M Coolen, Paul E Verweij, Jan Dijksterhuis, Willem J G Melchers
Identifying Conserved Generic Aspergillus spp. Co-Expressed Gene Modules Associated with Germination Using Cross-Platform and Cross-Species Transcriptomics. Journal of fungi (Basel, Switzerland) 7 (4) (2021)