Kaiyi Zhu

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 7

Top Topics

Bipolar Disorder

Top Venues

Nature biotechnology

Science advances

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle M G Espiritu, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, Ignaty Leshchiner, Dimitris Anastassiou, Yuanfang Guan, Gun Ho Jang, Mohammed Faizal Eeman Mootor, Kerstin Haase, Amit G Deshwar, William Zou, Imaad Umar, Stefan Dentro, Jeff A Wintersinger, Kami Chiotti, Jonas Demeulemeester, Clemency Jolly, Lesia Sycza, Minjeong Ko, null null, null null, David C Wedge, Quaid D Morris, Kyle Ellrott, Peter Van Loo, Paul C Boutros
Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction. Nature biotechnology (2024)
Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle M G Espiritu, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, Ignaty Leshchiner, Dimitris Anastassiou, Yuanfang Guan, Gun Ho Jang, Mohammed Faizal Eeman Mootor, Kerstin Haase, Amit G Deshwar, William Zou, Imaad Umar, Stefan Dentro, Jeff A Wintersinger, Kami Chiotti, Jonas Demeulemeester, Clemency Jolly, Lesia Sycza, Minjeong Ko, null null, null null, David C Wedge, Quaid D Morris, Kyle Ellrott, Peter Van Loo, Paul C Boutros
Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction. Nature biotechnology (2024)
Kaiyi Zhu, Jaroslav Bendl, Samir Rahman, James M Vicari, Claire Coleman, Tereza Clarence, Ovaun Latouche, Nadejda M Tsankova, Aiqun Li, Kristen J Brennand, Donghoon Lee, Guo-Cheng Yuan, John F Fullard, Panagiotis Roussos
Multi-omic profiling of the developing human cerebral cortex at the single-cell level. Science advances 9 (41) (2023)
Kaiyi Zhu, Lingyi Cai, Chenqian Cui, Juan R de Los Toyos, Dimitris Anastassiou
Single-cell analysis reveals the pan-cancer invasiveness-associated transition of adipose-derived stromal cells into COL11A1-expressing cancer-associated fibroblasts. PLoS computational biology 17 (7) (2021)
Adriana Salcedo, Maxime Tarabichi, Shadrielle Melijah G Espiritu, Amit G Deshwar, Matei David, Nathan M Wilson, Stefan Dentro, Jeff A Wintersinger, Lydia Y Liu, Minjeong Ko, Srinivasan Sivanandan, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, John M Chilton, Alex Buchanan, Christopher M Lalansingh, Christine P'ng, Catalina V Anghel, Imaad Umar, Bryan Lo, William Zou, null null, Jared T Simpson, Joshua M Stuart, Dimitris Anastassiou, Yuanfang Guan, Adam D Ewing, Kyle Ellrott, David C Wedge, Quaid Morris, Peter Van Loo, Paul C Boutros
A community effort to create standards for evaluating tumor subclonal reconstruction. Nature biotechnology 38 (1) (2020)
Oyetunji E Ogundijo, Kaiyi Zhu, Xiaodong Wang, Dimitris Anastassiou
A sequential Monte Carlo algorithm for inference of subclonal structure in cancer. PloS one 14 (1) (2019)
Kaiyi Zhu, Tai-Hsien Ou Yang, Vincent Dorie, Tian Zheng, Dimitris Anastassiou
Meta-analysis of expression and methylation signatures indicates a stress-related epigenetic mechanism in multiple neuropsychiatric disorders. Translational psychiatry 9 (1) (2019)