Quaid D Morris (Quaid Morris)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 27

Top Venues

Nature communications

Cancer discovery

Nature biotechnology

Scientific reports

Memorial Sloan Kettering Cancer Center

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Memorial Sloan Kettering Cancer Center Nov 01 2019

United States

Full Member :: Computational and Systems Biology

University of Toronto Sep 01 2005 - Dec 31 2020

Canada

Full professor :: Donnelly Centre

Publications

Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data. Cancer discovery 14 (6) (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data. Cancer discovery 14 (6) (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data. Cancer discovery 14 (6) (2024)
Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle M G Espiritu, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, Ignaty Leshchiner, Dimitris Anastassiou, Yuanfang Guan, Gun Ho Jang, Mohammed Faizal Eeman Mootor, Kerstin Haase, Amit G Deshwar, William Zou, Imaad Umar, Stefan Dentro, Jeff A Wintersinger, Kami Chiotti, Jonas Demeulemeester, Clemency Jolly, Lesia Sycza, Minjeong Ko, null null, null null, David C Wedge, Quaid D Morris, Kyle Ellrott, Peter Van Loo, Paul C Boutros
Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction. Nature biotechnology (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data. Cancer discovery 14 (6) (2024)
Adriana Salcedo, Maxime Tarabichi, Alex Buchanan, Shadrielle M G Espiritu, Hongjiu Zhang, Kaiyi Zhu, Tai-Hsien Ou Yang, Ignaty Leshchiner, Dimitris Anastassiou, Yuanfang Guan, Gun Ho Jang, Mohammed Faizal Eeman Mootor, Kerstin Haase, Amit G Deshwar, William Zou, Imaad Umar, Stefan Dentro, Jeff A Wintersinger, Kami Chiotti, Jonas Demeulemeester, Clemency Jolly, Lesia Sycza, Minjeong Ko, null null, null null, David C Wedge, Quaid D Morris, Kyle Ellrott, Peter Van Loo, Paul C Boutros
Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction. Nature biotechnology (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data. Cancer discovery (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data. Cancer discovery (2024)
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen, Jason C Chang, Efsevia Vakiani, Marjorie G Zauderer, Anoop Balakrishnan Rema, Aijazuddin Syed, Nikolaus Schultz, Michael F Berger, Quaid D Morris
Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data. Cancer discovery (2024)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Debashish Ray, Kaitlin U Laverty, Arttu Jolma, Kate Nie, Reuben Samson, Sara E Pour, Cyrus L Tam, Niklas von Krosigk, Syed Nabeel-Shah, Mihai Albu, Hong Zheng, Gabrielle Perron, Hyunmin Lee, Hamed Najafabadi, Benjamin J Blencowe, Jack Greenblatt, Quaid D Morris, Timothy R Hughes
RNA-binding proteins that lack canonical RNA-binding domains are rarely sequence-specific. Scientific reports 13 (1) (2023)
Debashish Ray, Kaitlin U Laverty, Arttu Jolma, Kate Nie, Reuben Samson, Sara E Pour, Cyrus L Tam, Niklas von Krosigk, Syed Nabeel-Shah, Mihai Albu, Hong Zheng, Gabrielle Perron, Hyunmin Lee, Hamed Najafabadi, Benjamin J Blencowe, Jack Greenblatt, Quaid D Morris, Timothy R Hughes
RNA-binding proteins that lack canonical RNA-binding domains are rarely sequence-specific. Scientific reports 13 (1) (2023)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Abdurrahman Elbasir, Ying Ye, Daniel E Schäffer, Xue Hao, Jayamanna Wickramasinghe, Konstantinos Tsingas, Paul M Lieberman, Qi Long, Quaid D Morris, Rugang Zhang, Alejandro A Schäffer, Noam Auslander
A deep learning approach reveals unexplored landscape of viral expression in cancer. Nature communications 14 (1) (2023)
Yulia Rubanova, Ruian Shi, Caitlin F Harrigan, Roujia Li, Jeff Wintersinger, Nil Sahin, Amit G Deshwar, null null, Quaid D Morris, null null
Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig. Nature communications 13 (1) (2022)
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, null null, Alexandra Danyi, Jeroen de Ridder, Carla van Herpen, Martijn Paul Lolkema, Neeltje Steeghs, Gad A Getz, Quaid D Morris, Lincoln D Stein, null null
Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns. Nature communications 13 (1) (2022)
Caitlin M Timmons, Quaid D Morris, Caitlin F Harrigan
Regional mutational signature activities in cancer genomes. PLoS computational biology 18 (12) (2022)
Kimberly Skead, Armande Ang Houle, Sagi Abelson, Mawusse Agbessi, Vanessa Bruat, Boxi Lin, David Soave, Liran Shlush, Stephen I Wright, John E Dick, Quaid D Morris, Phillip Awadalla
Interacting evolutionary pressures drive mutation dynamics and health outcomes in aging blood. Nature communications 12 (1) (2021)
Maxime Tarabichi, Adriana Salcedo, Amit G Deshwar, Máire Ní Leathlobhair, Jeff A Wintersinger, David C Wedge, Peter Van Loo, Quaid D Morris, Paul C Boutros
A practical guide to cancer subclonal reconstruction from DNA sequencing. Nature methods 18 (2) (2021)
Lydia Y Liu, Vinayak Bhandari, Adriana Salcedo, Shadrielle M G Espiritu, Quaid D Morris, Thomas Kislinger, Paul C Boutros
Quantifying the influence of mutation detection on tumour subclonal reconstruction. Nature communications 11 (1) (2020)
Yulia Rubanova, Ruian Shi, Caitlin F Harrigan, Roujia Li, Jeff Wintersinger, Nil Sahin, Amit Deshwar, null null, Quaid D Morris, null null
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig. Nature communications 11 (1) (2020)
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, null null, Alexandra Danyi, Jeroen de Ridder, Carla van Herpen, Martijn Paul Lolkema, Neeltje Steeghs, Gad A Getz, Quaid D Morris, Lincoln D Stein, null null
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns. Nature communications 11 (1) (2020)
Samuel A Lambert, Ally W H Yang, Alexander Sasse, Gwendolyn Cowley, Mihai Albu, Mark X Caddick, Quaid D Morris, Matthew T Weirauch, Timothy R Hughes
Similarity regression predicts evolution of transcription factor sequence specificity. Nature genetics 51 (6) (2019)
Maxime Tarabichi, Iñigo Martincorena, Moritz Gerstung, Armand M Leroi, Florian Markowetz, null null, Paul T Spellman, Quaid D Morris, Ole Christian Lingjærde, David C Wedge, Peter Van Loo
Neutral tumor evolution? Nature genetics 50 (12) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Quaid D Morris (Quaid Morris)