Katharine M Jenike (Katherine Jenike)

Publication Activity (10 Years)

Years Active: 2023-2024
Publications (10 Years): 13

Top Topics

Respiratory Syndrome Coronavirus

Top Venues

bioRxiv : the preprint server for biology

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Sam Kovaka, Paul W Hook, Katharine M Jenike, Vikram S Shivakumar, Luke B Morina, Roham Razaghi, Winston Timp, Michael C Schatz
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment. bioRxiv : the preprint server for biology (2024)
Stephen Hwang, Nathaniel K Brown, Omar Y Ahmed, Katharine M Jenike, Sam Kovaka, Michael C Schatz, Ben Langmead
MEM-based pangenome indexing for k -mer queries. bioRxiv : the preprint server for biology (2024)
James W Satterlee, David Alonso, Pietro Gramazio, Katharine M Jenike, Jia He, Andrea Arrones, Gloria Villanueva, Mariola Plazas, Srividya Ramakrishnan, Matthias Benoit, Iacopo Gentile, Anat Hendelman, Hagai Shohat, Blaine Fitzgerald, Gina M Robitaille, Yumi Green, Kerry Swartwood, Michael John Passalacqua, Edeline Gagnon, Rebecca Hilgenhof, Trevis D Huggins, Georgia C Eizenga, Amit Gur, Twan Rutten, Nils Stein, Shengrui Yao, Adrien Poncet, Clement Bellot, Amy Frary, Sandra Knapp, Mohammed Bendahmane, Tiina Särkinen, Jonathan M Werner, Joyce Van Eck, Michael C Schatz, Yuval Eshed, Jaime Prohens, Santiago Vilanova, Zachary B Lippman
Convergent evolution of plant prickles by repeated gene co-option over deep time. Science (New York, N.Y.) 385 (6708) (2024)
Sergey Koren, Zhigui Bao, Andrea Guarracino, Shujun Ou, Sara Goodwin, Katharine M Jenike, Julian Lucas, Brandy McNulty, Jimin Park, Mikko Rautianinen, Arang Rhie, Dick Roelofs, Harrie Schneiders, Ilse Vrijenhoek, Koen Nijbroek, Doreen Ware, Michael C Schatz, Erik P Garrison, Sanwen Huang, William Richard McCombie, Karen H Miga, Alexander H J Wittenberg, Adam M Phillippy
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing. bioRxiv : the preprint server for biology (2024)
Sam Kovaka, Paul W Hook, Katharine M Jenike, Vikram S Shivakumar, Luke B Morina, Roham Razaghi, Winston Timp, Michael C Schatz
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment. bioRxiv : the preprint server for biology (2024)
James W Satterlee, David Alonso, Pietro Gramazio, Katharine M Jenike, Jia He, Andrea Arrones, Gloria Villanueva, Mariola Plazas, Srividya Ramakrishnan, Matthias Benoit, Iacopo Gentile, Anat Hendelman, Hagai Shohat, Blaine Fitzgerald, Gina M Robitaille, Yumi Green, Kerry Swartwood, Michael John Passalacqua, Edeline Gagnon, Rebecca Hilgenhof, Trevis D Huggins, Georgia C Eizenga, Amit Gur, Twan Rutten, Nils Stein, Shengrui Yao, Adrien Poncet, Clement Bellot, Amy Frary, Sandra Knapp, Mohammed Bendahmane, Tiina Särkinen, Jonathan M Werner, Joyce Van Eck, Michael C Schatz, Yuval Eshed, Jaime Prohens, Santiago Vilanova, Zachary B Lippman
Convergent evolution of plant prickles by repeated gene co-option over deep time. Science (New York, N.Y.) 385 (6708) (2024)
Stephen Hwang, Nathaniel K Brown, Omar Y Ahmed, Katharine M Jenike, Sam Kovaka, Michael C Schatz, Ben Langmead
MEM-based pangenome indexing for k -mer queries. bioRxiv : the preprint server for biology (2024)
Stephen Hwang, Nathaniel K Brown, Omar Y Ahmed, Katharine M Jenike, Sam Kovaka, Michael C Schatz, Ben Langmead
MEM-based pangenome indexing for k -mer queries. bioRxiv : the preprint server for biology (2024)
Sergey Koren, Zhigui Bao, Andrea Guarracino, Shujun Ou, Sara Goodwin, Katharine M Jenike, Julian Lucas, Brandy McNulty, Jimin Park, Mikko Rautianinen, Arang Rhie, Dick Roelofs, Harrie Schneiders, Ilse Vrijenhoek, Koen Nijbroek, Doreen Ware, Michael C Schatz, Erik P Garrison, Sanwen Huang, William Richard McCombie, Karen H Miga, Alexander H J Wittenberg, Adam M Phillippy
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing. bioRxiv : the preprint server for biology (2024)
James W Satterlee, David Alonso, Pietro Gramazio, Katharine M Jenike, Jia He, Andrea Arrones, Gloria Villanueva, Mariola Plazas, Srividya Ramakrishnan, Matthias Benoit, Iacopo Gentile, Anat Hendelman, Hagai Shohat, Blaine Fitzgerald, Gina M Robitaille, Yumi Green, Kerry Swartwood, Michael John Passalacqua, Edeline Gagnon, Rebecca Hilgenhof, Trevis D Huggins, Georgia C Eizenga, Amit Gur, Twan Rutten, Nils Stein, Shengrui Yao, Adrien Poncet, Clement Bellot, Amy Frary, Sandra Knapp, Mohammed Bendahmane, Tiina Särkinen, Jonathan M Werner, Joyce Van Eck, Michael C Schatz, Yuval Eshed, Jaime Prohens, Santiago Vilanova, Zachary B Lippman
Convergent evolution of plant prickles by repeated gene co-option over deep time. Science (New York, N.Y.) 385 (6708) (2024)
Sergey Koren, Zhigui Bao, Andrea Guarracino, Shujun Ou, Sara Goodwin, Katharine M Jenike, Julian Lucas, Brandy McNulty, Jimin Park, Mikko Rautiainen, Arang Rhie, Dick Roelofs, Harrie Schneiders, Ilse Vrijenhoek, Koen Nijbroek, Doreen Ware, Michael C Schatz, Erik P Garrison, Sanwen Huang, W Richard McCombie, Karen H Miga, Alexander H J Wittenberg, Adam M Phillippy
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing. bioRxiv : the preprint server for biology (2024)
Stephen Hwang, Nathaniel K Brown, Omar Y Ahmed, Katharine M Jenike, Sam Kovaka, Michael C Schatz, Ben Langmead
MEM-based pangenome indexing for k -mer queries. bioRxiv : the preprint server for biology (2024)
Dennis William Stevenson, Srividya Ramakrishnan, Cristiane de Santis Alves, Laís Araujo Coelho, Melissa Kramer, Sara Goodwin, Olivia Mendivil Ramos, Gil Eshel, Veronica M Sondervan, Samantha Frangos, Cecilia Zumajo-Cardona, Katharine M Jenike, Shujun Ou, Xiaojin Wang, Yin Peng Lee, Stella Loke, Maurizio Rossetto, Hannah McPherson, Sebastiano Nigris, Silvia Moschin, Damon P Little, Manpreet S Katari, Kranthi Varala, Sergios-Orestis Kolokotronis, Barbara A Ambrose, Laurence J Croft, Gloria M Coruzzi, Michael C Schatz, W Richard McCombie, Robert A Martienssen
The genome of the Wollemi pine, a critically endangered "living fossil" unchanged since the Cretaceous, reveals extensive ancient transposon activity. bioRxiv : the preprint server for biology (2023)