Koji Yonekura

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 25

Top Topics

Electron Microscopy

Structural Basis

Transition Metal

Top Venues

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

Communications biology

This page only lists publications with an associated author ORCID identifier.

Publications

Koji Kato, Tasuku Hamaguchi, Minoru Kumazawa, Yoshiki Nakajima, Kentaro Ifuku, Shunsuke Hirooka, Yuu Hirose, Shin-Ya Miyagishima, Takehiro Suzuki, Keisuke Kawakami, Naoshi Dohmae, Koji Yonekura, Jian Ren Shen, Ryo Nagao
The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs. Proceedings of the National Academy of Sciences of the United States of America 121 (11) (2024)
Koji Kato, Tasuku Hamaguchi, Minoru Kumazawa, Yoshiki Nakajima, Kentaro Ifuku, Shunsuke Hirooka, Yuu Hirose, Shin-Ya Miyagishima, Takehiro Suzuki, Keisuke Kawakami, Naoshi Dohmae, Koji Yonekura, Jian Ren Shen, Ryo Nagao
The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs. Proceedings of the National Academy of Sciences of the United States of America 121 (11) (2024)
Kiyofumi Takaba, Saori Maki-Yonekura, Ichiro Inoue, Kensuke Tono, Yasuhiro Fukuda, Yota Shiratori, Yiying Peng, Jumpei Morimoto, Satoru Inoue, Toshiki Higashino, Shinsuke Sando, Tatsuo Hasegawa, Makina Yabashi, Koji Yonekura
Comprehensive Application of XFEL Microcrystallography for Challenging Targets in Various Organic Compounds. Journal of the American Chemical Society (2024)
Koji Kato, Tasuku Hamaguchi, Minoru Kumazawa, Yoshiki Nakajima, Kentaro Ifuku, Shunsuke Hirooka, Yuu Hirose, Shin-Ya Miyagishima, Takehiro Suzuki, Keisuke Kawakami, Naoshi Dohmae, Koji Yonekura, Jian Ren Shen, Ryo Nagao
The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs. Proceedings of the National Academy of Sciences of the United States of America 121 (11) (2024)
Kiyofumi Takaba, Saori Maki-Yonekura, Ichiro Inoue, Kensuke Tono, Yasuhiro Fukuda, Yota Shiratori, Yiying Peng, Jumpei Morimoto, Satoru Inoue, Toshiki Higashino, Shinsuke Sando, Tatsuo Hasegawa, Makina Yabashi, Koji Yonekura
Comprehensive Application of XFEL Microcrystallography for Challenging Targets in Various Organic Compounds. Journal of the American Chemical Society 146 (9) (2024)
Koji Kato, Tasuku Hamaguchi, Minoru Kumazawa, Yoshiki Nakajima, Kentaro Ifuku, Shunsuke Hirooka, Yuu Hirose, Shin-Ya Miyagishima, Takehiro Suzuki, Keisuke Kawakami, Naoshi Dohmae, Koji Yonekura, Jian Ren Shen, Ryo Nagao
The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs. Proceedings of the National Academy of Sciences of the United States of America 121 (11) (2024)
Kiyofumi Takaba, Saori Maki-Yonekura, Ichiro Inoue, Kensure Tono, Tasuku Hamaguchi, Keisuke Kawakami, Hisashi Naitow, Tetsuya Ishikawa, Makina Yabashi, Koji Yonekura
Structural resolution of a small organic molecule by serial X-ray free-electron laser and electron crystallography. Nature chemistry (2023)
Ryo Nagao, Koji Kato, Tasuku Hamaguchi, Yoshifumi Ueno, Naoki Tsuboshita, Shota Shimizu, Miyu Furutani, Shigeki Ehira, Yoshiki Nakajima, Keisuke Kawakami, Takehiro Suzuki, Naoshi Dohmae, Seiji Akimoto, Koji Yonekura, Jian Ren Shen
Structure of a monomeric photosystem I core associated with iron-stress-induced-A proteins from Anabaena sp. PCC 7120. Nature communications 14 (1) (2023)
Ryo Nagao, Koji Kato, Tasuku Hamaguchi, Yoshifumi Ueno, Naoki Tsuboshita, Shota Shimizu, Miyu Furutani, Shigeki Ehira, Yoshiki Nakajima, Keisuke Kawakami, Takehiro Suzuki, Naoshi Dohmae, Seiji Akimoto, Koji Yonekura, Jian Ren Shen
Structure of a monomeric photosystem I core associated with iron-stress-induced-A proteins from Anabaena sp. PCC 7120. Nature communications 14 (1) (2023)
Hiroki Aizawa, Takuro Sato, Saori Maki-Yonekura, Koji Yonekura, Kiyofumi Takaba, Tasuku Hamaguchi, Taketoshi Minato, Hiroshi M Yamamoto
Enantioselectivity of discretized helical supramolecule consisting of achiral cobalt phthalocyanines via chiral-induced spin selectivity effect. Nature communications 14 (1) (2023)
Saori Maki-Yonekura, Keisuke Kawakami, Kiyofumi Takaba, Tasuku Hamaguchi, Koji Yonekura
Measurement of charges and chemical bonding in a cryo-EM structure. Communications chemistry 6 (1) (2023)
Tomoki Himiyama, Tasuku Hamaguchi, Koji Yonekura, Tsutomu Nakamura
Unnaturally Distorted Hexagonal Protein Ring Alternatingly Reorganized from Two Distinct Chemically Modified Proteins. Bioconjugate chemistry (2023)
Kiyofumi Takaba, Saori Maki-Yonekura, Ichiro Inoue, Kensure Tono, Tasuku Hamaguchi, Keisuke Kawakami, Hisashi Naitow, Tetsuya Ishikawa, Makina Yabashi, Koji Yonekura
Author Correction: Structural resolution of a small organic molecule by serial X-ray free-electron laser and electron crystallography. Nature chemistry (2023)
Ryo Nagao, Koji Kato, Tasuku Hamaguchi, Yoshifumi Ueno, Naoki Tsuboshita, Shota Shimizu, Miyu Furutani, Shigeki Ehira, Yoshiki Nakajima, Keisuke Kawakami, Takehiro Suzuki, Naoshi Dohmae, Seiji Akimoto, Koji Yonekura, Jian Ren Shen
Structure of a monomeric photosystem I core associated with iron-stress-induced-A proteins from Anabaena sp. PCC 7120. Nature communications 14 (1) (2023)
Akihiro Kimura, Hirotaka Kitoh-Nishioka, Toshimichi Aota, Tasuku Hamaguchi, Koji Yonekura, Keisuke Kawakami, Kyoko Shinzawa-Itoh, Natsuko Inoue-Kashino, Kentaro Ifuku, Eiki Yamashita, Yasuhiro Kashino, Shigeru Itoh
Theoretical Model of the Far-Red-Light-Adapted Photosystem I Reaction Center of Cyanobacterium Acaryochloris marina Using Chlorophyll d and the Effect of Chlorophyll Exchange. The journal of physical chemistry. B 126 (22) (2022)
Koji Kato, Tasuku Hamaguchi, Ryo Nagao, Keisuke Kawakami, Yoshifumi Ueno, Takehiro Suzuki, Hiroko Uchida, Akio Murakami, Yoshiki Nakajima, Makio Yokono, Seiji Akimoto, Naoshi Dohmae, Koji Yonekura, Jian Ren Shen
Structural basis for the absence of low-energy chlorophylls in a photosystem I trimer from Gloeobacter violaceus . eLife 11 (2022)
Naotaka Sekiyama, Kiyofumi Takaba, Saori Maki-Yonekura, Ken-Ichi Akagi, Yasuko Ohtani, Kayo Imamura, Tsuyoshi Terakawa, Keitaro Yamashita, Daigo Inaoka, Koji Yonekura, Takashi S Kodama, Hidehito Tochio
ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures. Proceedings of the National Academy of Sciences of the United States of America 119 (38) (2022)
Keisuke Kawakami, Tasuku Hamaguchi, Yuu Hirose, Daisuke Kosumi, Makoto Miyata, Nobuo Kamiya, Koji Yonekura
Core and rod structures of a thermophilic cyanobacterial light-harvesting phycobilisome. Nature communications 13 (1) (2022)
Koji Yonekura, Saori Maki-Yonekura, Hisashi Naitow, Tasuku Hamaguchi, Kiyofumi Takaba
Machine learning-based real-time object locator/evaluator for cryo-EM data collection. Communications biology 4 (1) (2021)
Tasuku Hamaguchi, Keisuke Kawakami, Kyoko Shinzawa-Itoh, Natsuko Inoue-Kashino, Shigeru Itoh, Kentaro Ifuku, Eiki Yamashita, Kou Maeda, Koji Yonekura, Yasuhiro Kashino
Structure of the far-red light utilizing photosystem I of Acaryochloris marina. Nature communications 12 (1) (2021)
Koji Kato, Naoyuki Miyazaki, Tasuku Hamaguchi, Yoshiki Nakajima, Fusamichi Akita, Koji Yonekura, Jian Ren Shen
High-resolution cryo-EM structure of photosystem II reveals damage from high-dose electron beams. Communications biology 4 (1) (2021)
Hisashi Naitow, Tasuku Hamaguchi, Saori Maki-Yonekura, Masamichi Isogai, Nobuyuki Yoshikawa, Koji Yonekura
Apple latent spherical virus structure with stable capsid frame supports quasi-stable protrusions expediting genome release. Communications biology 3 (1) (2020)
Koji Yonekura, Saori Maki-Yonekura, Rei Matsuoka, Yoshiki Yamashita, Hirofumi Shimizu, Maiko Tanaka, Fumie Iwabuki
Correction: Hexameric and pentameric complexes of the ExbBD energizer in the Ton system. eLife 7 (2018)
Saori Maki-Yonekura, Rei Matsuoka, Yoshiki Yamashita, Hirofumi Shimizu, Maiko Tanaka, Fumie Iwabuki, Koji Yonekura
Hexameric and pentameric complexes of the ExbBD energizer in the Ton system. eLife 7 (2018)
Koji Yonekura, Rei Matsuoka, Yoshiki Yamashita, Tsutomu Yamane, Mitsunori Ikeguchi, Akinori Kidera, Saori Maki-Yonekura
Ionic scattering factors of atoms that compose biological molecules. IUCrJ 5 (Pt 3) (2018)