Konstantin V Severinov (Konstantin Severinov)

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 49

Top Topics

Escherichia Coli

Gene Expression

Top Venues

Nucleic acids research

Nature communications

International journal of molecular sciences

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Anastasiia Chaban, Leonid Minakhin, Ekaterina Goldobina, Brain Bae, Yue Hao, Sergei Borukhov, Leena Putzeys, Maarten Boon, Florian Kabinger, Rob Lavigne, Kira S Makarova, Eugene V Koonin, Satish K Nair, Shunsuke Tagami, Konstantin V Severinov, Maria L Sokolova
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail. Nature communications 15 (1) (2024)
Ishita Jain, Matvey Kolesnik, Konstantin Kuznedelov, Leonid Minakhin, Natalia Morozova, Anna A Shiriaeva, Alexandr Kirillov, Sofia Medvedeva, Alexei Livenskyi, Laura Kazieva, Kira S Makarova, Eugene V Koonin, Sergei Borukhov, Konstantin V Severinov, Ekaterina Semenova
tRNA anticodon cleavage by target-activated CRISPR-Cas13a effector. Science advances 10 (17) (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research 52 (8) (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research 52 (8) (2024)
Ishita Jain, Matvey Kolesnik, Konstantin Kuznedelov, Leonid Minakhin, Natalia Morozova, Anna A Shiriaeva, Alexandr Kirillov, Sofia Medvedeva, Alexei Livenskyi, Laura Kazieva, Kira S Makarova, Eugene V Koonin, Sergei Borukhov, Konstantin V Severinov, Ekaterina Semenova
tRNA anticodon cleavage by target-activated CRISPR-Cas13a effector. Science advances 10 (17) (2024)
Anastasiia Chaban, Leonid Minakhin, Ekaterina Goldobina, Brain Bae, Yue Hao, Sergei Borukhov, Leena Putzeys, Maarten Boon, Florian Kabinger, Rob Lavigne, Kira S Makarova, Eugene V Koonin, Satish K Nair, Shunsuke Tagami, Konstantin V Severinov, Maria L Sokolova
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail. Nature communications 15 (1) (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research 52 (8) (2024)
Mikhail Skutel, Daria Yanovskaya, Alina Demkina, Aleksandr Shenfeld, Olga Musharova, Konstantin V Severinov, Artem Isaev
RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation. Nucleic acids research 52 (9) (2024)
Svetlana Kozlova, Natalia Morozova, Iaroslav Ispolatov, Konstantin V Severinov
Dependence of post-segregational killing mediated by Type II restriction-modification systems on the lifetime of restriction endonuclease effective activity. mBio 15 (8) (2024)
Svetlana Kozlova, Natalia Morozova, Iaroslav Ispolatov, Konstantin V Severinov
Dependence of post-segregational killing mediated by Type II restriction-modification systems on the lifetime of restriction endonuclease effective activity. mBio 15 (8) (2024)
Svetlana Kozlova, Natalia Morozova, Iaroslav Ispolatov, Konstantin V Severinov
Dependence of post-segregational killing mediated by Type II restriction-modification systems on the lifetime of restriction endonuclease effective activity. mBio 15 (8) (2024)
Mikhail Skutel, Daria Yanovskaya, Alina Demkina, Aleksandr Shenfeld, Olga Musharova, Konstantin V Severinov, Artem Isaev
RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation. Nucleic acids research 52 (9) (2024)
Ishita Jain, Matvey Kolesnik, Konstantin Kuznedelov, Leonid Minakhin, Natalia Morozova, Anna A Shiriaeva, Alexandr Kirillov, Sofia Medvedeva, Alexei Livenskyi, Laura Kazieva, Kira S Makarova, Eugene V Koonin, Sergei Borukhov, Konstantin V Severinov, Ekaterina Semenova
tRNA anticodon cleavage by target-activated CRISPR-Cas13a effector. Science advances 10 (17) (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research 52 (8) (2024)
Mikhail Skutel, Daria Yanovskaya, Alina Demkina, Aleksandr Shenfeld, Olga Musharova, Konstantin V Severinov, Artem Isaev
RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation. Nucleic acids research (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research (2024)
Mikhail Skutel, Daria Yanovskaya, Alina Demkina, Aleksandr Shenfeld, Olga Musharova, Konstantin V Severinov, Artem Isaev
RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation. Nucleic acids research 52 (9) (2024)
Svetlana Kozlova, Natalia Morozova, Iaroslav Ispolatov, Konstantin V Severinov
Dependence of post-segregational killing mediated by Type II restriction-modification systems on the lifetime of restriction endonuclease effective activity. mBio (2024)
Mikhail Skutel, Daria Yanovskaya, Alina Demkina, Aleksandr Shenfeld, Olga Musharova, Konstantin V Severinov, Artem Isaev
RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation. Nucleic acids research 52 (9) (2024)
Anastasiia Chaban, Leonid Minakhin, Ekaterina Goldobina, Brain Bae, Yue Hao, Sergei Borukhov, Leena Putzeys, Maarten Boon, Florian Kabinger, Rob Lavigne, Kira S Makarova, Eugene V Koonin, Satish K Nair, Shunsuke Tagami, Konstantin V Severinov, Maria L Sokolova
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail. Nature communications 15 (1) (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch. Nucleic acids research (2024)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. bioRxiv : the preprint server for biology (2023)
Mikhail Skutel, Aleksandr Andriianov, Maria Zavialova, Maria Kirsanova, Oluwasefunmi Shodunke, Evgenii Zorin, Aleksandr Golovshchinskii, Konstantin V Severinov, Artem Isaev
T5-like phage BF23 evades host-mediated DNA restriction and methylation. microLife 4 (2023)
Daria Antonova, Viktoriia V Belousova, Erik Zhivkoplias, Mariia Sobinina, Tatyana Artamonova, Innokentii E Vishnyakov, Inna Kurdyumova, Anatoly Arseniev, Natalia Morozova, Konstantin V Severinov, Mikhail Khodorkovskii, Maria V Yakunina
The Dynamics of Synthesis and Localization of Jumbo Phage RNA Polymerases inside Infected Cells. Viruses 15 (10) (2023)
Dmitry Sutormin, Veronika Mihailovskaya, Anna Trofimova, Victor Mamontov, Marina Kuznetsova, Konstantin V Severinov
Complete genome sequences of three commensal and two avian pathogenic Escherichia coli strains isolated from farm animals in Russia. Microbiology resource announcements (2023)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. bioRxiv : the preprint server for biology (2023)
Veronika S Mihailovskaya, Dmitry A Sutormin, Marina O Karipova, Anna B Trofimova, Victor A Mamontov, Konstantin V Severinov, Marina V Kuznetsova
Bacteriocin-Producing Escherichia coli Q5 and C41 with Potential Probiotic Properties: In Silico, In Vitro, and In Vivo Studies. International journal of molecular sciences 24 (16) (2023)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. bioRxiv : the preprint server for biology (2023)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. bioRxiv : the preprint server for biology (2023)
Laura M Hertz, Elise N White, Konstantin Kuznedelov, Luyi Cheng, Angela M Yu, Rivaan Kakkaramadam, Konstantin V Severinov, Alan A Chen, Julius B Lucks
The Effect of Pseudoknot Base Pairing on Cotranscriptional Structural Switching of the Fluoride Riboswitch. bioRxiv : the preprint server for biology (2023)
Viktor Mamontov, Alexander Martynov, Natalia Morozova, Anton Bukatin, Dmitry B Staroverov, Konstantin A Lukyanov, Iaroslav Ispolatov, Ekaterina Semenova, Konstantin V Severinov
Persistence of plasmids targeted by CRISPR interference in bacterial populations. Proceedings of the National Academy of Sciences of the United States of America 119 (15) (2022)
Dmitry Bikmetov, Alexander M J Hall, Alexei Livenskyi, Bridget Gollan, Stepan Ovchinnikov, Konstantin Gilep, Jenny Y Kim, Gerald Larrouy-Maumus, Viktor Zgoda, Sergei Borukhov, Konstantin V Severinov, Sophie Helaine, Svetlana Dubiley
GNAT toxins evolve toward narrow tRNA target specificities. Nucleic acids research 50 (10) (2022)
Sooyeon Song, Ekaterina Semenova, Konstantin V Severinov, Laura Fernandez-Garcia, Michael J Benedik, Toshinari Maeda, Thomas K Wood
CRISPR-Cas Controls Cryptic Prophages. International journal of molecular sciences 23 (24) (2022)
Alec Fraser, Maria L Sokolova, Arina V Drobysheva, Julia V Gordeeva, Sergei Borukhov, John M Jumper, Konstantin V Severinov, Petr G Leiman
Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase. Nature communications 13 (1) (2022)
Sooyeon Song, Ekaterina Semenova, Konstantin V Severinov, Laura Fernandez-Garcia, Michael J Benedik, Toshinari Maeda, Thomas K Wood
CRISPR-Cas Controls Cryptic Prophages. International journal of molecular sciences 23 (24) (2022)
Alexander Kirillov, Natalia Morozova, Svetlana Kozlova, Vasilisa Polinovskaya, Sergey Smirnov, Mikhail Khodorkovskii, Lanying Zeng, Yaroslav Ispolatov, Konstantin V Severinov
Cells with stochastically increased methyltransferase to restriction endonuclease ratio provide an entry for bacteriophage into protected cell population. Nucleic acids research (2022)
Dmitry Sutormin, Alina Galivondzhyan, Olga Musharova, Dmitrii Travin, Anastasiia Rusanova, Kseniya Obraztsova, Sergei Borukhov, Konstantin V Severinov
Interaction between transcribing RNA polymerase and topoisomerase I prevents R-loop formation in E. coli. Nature communications 13 (1) (2022)
Sooyeon Song, Ekaterina Semenova, Konstantin V Severinov, Laura Fernandez-Garcia, Michael J Benedik, Toshinari Maeda, Thomas K Wood
CRISPR-Cas Controls Cryptic Prophages. International journal of molecular sciences 23 (24) (2022)
Regina Shebanova, Natalia Nikitchina, Nikita Shebanov, Vladimir Mekler, Konstantin Kuznedelov, Egor Ulashchik, Ruslan Vasilev, Olga Sharko, Vadim Shmanai, Ivan Tarassov, Konstantin V Severinov, Nina Entelis, Ilya Mazunin
Efficient target cleavage by Type V Cas12a effectors programmed with split CRISPR RNA. Nucleic acids research 50 (2) (2022)
Anna A Shiriaeva, Konstantin Kuznedelov, Ivan Fedorov, Olga Musharova, Timofey Khvostikov, Yuliya Tsoy, Elena Kurilovich, Gerald R Smith, Ekaterina Semenova, Konstantin V Severinov
Host nucleases generate prespacers for primed adaptation in the E. coli type I-E CRISPR-Cas system. Science advances 8 (47) (2022)
Daria Lavysh, Vladimir Mekler, Evgeniy I Klimuk, Konstantin V Severinov
Regulation of Gene Expression of phiEco32-like Bacteriophage 7-11. Viruses 14 (3) (2022)
Sooyeon Song, Ekaterina Semenova, Konstantin V Severinov, Laura Fernandez-Garcia, Michael J Benedik, Toshinari Maeda, Thomas K Wood
CRISPR-Cas Controls Cryptic Prophages. International journal of molecular sciences 23 (24) (2022)
Olga Musharova, Sofya A Medvedeva, Evgeniy I Klimuk, Noemi Marco Guzman, Daria Titova, Victor G Zgoda, Anna A Shiriaeva, Ekaterina Semenova, Konstantin V Severinov, Ekaterina Savitskaya
Prespacers formed during primed adaptation associate with the Cas1-Cas2 adaptation complex and the Cas3 interference nuclease-helicase. Proceedings of the National Academy of Sciences of the United States of America 118 (22) (2021)
Bogdan Kirillov, Ekaterina Savitskaya, Maxim Panov, Aleksey Y Ogurtsov, Svetlana A Shabalina, Eugene V Koonin, Konstantin V Severinov
Uncertainty-aware and interpretable evaluation of Cas9-gRNA and Cas12a-gRNA specificity for fully matched and partially mismatched targets with Deep Kernel Learning. Nucleic acids research (2021)
Stanislav S Terekhov, Igor E Eliseev, Leyla A Ovchinnikova, Marsel Rasimovich Kabilov, Andrey D Prjibelski, Alexey E Tupikin, Ivan V Smirnov, Alexey A Belogurov, Konstantin V Severinov, Yakov A Lomakin, Sidney Altman, Alexander G Gabibov
Liquid drop of DNA libraries reveals total genome information. Proceedings of the National Academy of Sciences of the United States of America 117 (44) (2020)
Arina V Drobysheva, Sofia A Panafidina, Matvei V Kolesnik, Evgeniy I Klimuk, Leonid Minakhin, Maria V Yakunina, Sergei Borukhov, Emelie Nilsson, Karin Holmfeldt, Natalya Yutin, Kira S Makarova, Eugene V Koonin, Konstantin V Severinov, Petr G Leiman, Maria L Sokolova
Structure and function of virion RNA polymerase of a crAss-like phage. Nature 589 (7841) (2020)
Olga Musharova, Vasily Sitnik, Marnix Vlot, Ekaterina Savitskaya, Kirill A Datsenko, Andrey Krivoy, Ivan Fedorov, Ekaterina Semenova, Stan J J Brouns, Konstantin V Severinov
Systematic analysis of Type I-E Escherichia coli CRISPR-Cas PAM sequences ability to promote interference and primed adaptation. Molecular microbiology 111 (6) (2019)
Oliver W Bayfield, Evgeniy I Klimuk, Dennis C Winkler, Emma L Hesketh, Maria Chechik, Naiqian Cheng, Eric C Dykeman, Leonid Minakhin, Neil A Ranson, Konstantin V Severinov, Alasdair C Steven, Alfred A Antson
Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids. Proceedings of the National Academy of Sciences of the United States of America 116 (9) (2019)
Julia Piskunova, Etienne Maisonneuve, Elsa Germain, Kenn Gerdes, Konstantin V Severinov
Peptide-nucleotide antibiotic Microcin C is a potent inducer of stringent response and persistence in both sensitive and producing cells. Molecular microbiology 104 (3) (2017)