Li Deng (L Deng)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 23

Top Venues

Nature communications

Viruses

International journal of molecular sciences

Scientific reports

Helmholtz Zentrum München

University of Bristol (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Helmholtz Zentrum München Sep 06 2016

Germany

Emmy Noether group leader :: Institute of Virology

Helmholtz Zentrum München Dec 01 2011 - Aug 31 2016

Germany

Scientist :: Institute of Groundwater Ecology

University of Arizona Oct 01 2008 - Oct 31 2011

United States

Postsdoc research associate :: Ecology and Evolutional Biology Department

Austrian Academy of Sciences Oct 01 2010 - Aug 31 2011

Austria

Visiting scientist :: Institute of Limnology

Education History

University of Bristol Oct 01 2004 - Oct 01 2008

United Kingdom

PHD :: School of Biological Sciences

University of Nottingham Oct 01 2003 - Sep 30 2004

United Kingdom

MSC :: School of Environmental Science

Publications

M C Ramaboli, S Ocvirk, Mohammadali Khan Mirzaei, B L Eberhart, M Valdivia-Garcia, Amira Metwaly, Klaus Neuhaus, G Barker, J Ru, L T Nesengani, D Mahdi-Joest, A S Wilson, S K Joni, D C Layman, J Zheng, R Mandal, Q Chen, Miriam R Perez, S Fortuin, B Gaunt, D Wishart, B Methé, Dirk Haller, Jia V Li, Li Deng, Elizabeth Catherina Swart, S J D O'Keefe
Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer. Nature communications 15 (1) (2024)
M C Ramaboli, S Ocvirk, Mohammadali Khan Mirzaei, B L Eberhart, M Valdivia-Garcia, Amira Metwaly, Klaus Neuhaus, G Barker, J Ru, L T Nesengani, D Mahdi-Joest, A S Wilson, S K Joni, D C Layman, J Zheng, R Mandal, Q Chen, Miriam R Perez, S Fortuin, B Gaunt, D Wishart, B Methé, Dirk Haller, Jia V Li, Li Deng, Elizabeth Catherina Swart, S J D O'Keefe
Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer. Nature communications 15 (1) (2024)
M C Ramaboli, S Ocvirk, Mohammadali Khan Mirzaei, B L Eberhart, M Valdivia-Garcia, Amira Metwaly, Klaus Neuhaus, G Barker, J Ru, L T Nesengani, D Mahdi-Joest, A S Wilson, S K Joni, D C Layman, J Zheng, R Mandal, Q Chen, Miriam R Perez, S Fortuin, B Gaunt, D Wishart, B Methé, Dirk Haller, Jia V Li, Li Deng, Elizabeth Catherina Swart, S J D O'Keefe
Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer. Nature communications 15 (1) (2024)
M C Ramaboli, S Ocvirk, Mohammadali Khan Mirzaei, B L Eberhart, M Valdivia-Garcia, Amira Metwaly, Klaus Neuhaus, G Barker, J Ru, L T Nesengani, D Mahdi-Joest, A S Wilson, S K Joni, D C Layman, J Zheng, R Mandal, Q Chen, Miriam R Perez, S Fortuin, B Gaunt, D Wishart, B Methé, Dirk Haller, Jia V Li, Li Deng, Elizabeth Catherina Swart, S J D O'Keefe
Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer. Nature communications 15 (1) (2024)
M C Ramaboli, S Ocvirk, Mohammadali Khan Mirzaei, B L Eberhart, M Valdivia-Garcia, Amira Metwaly, Klaus Neuhaus, G Barker, J Ru, L T Nesengani, D Mahdi-Joest, A S Wilson, S K Joni, D C Layman, J Zheng, R Mandal, Q Chen, Miriam R Perez, S Fortuin, B Gaunt, D Wishart, B Methé, Dirk Haller, Jia V Li, Li Deng, Elizabeth Catherina Swart, S J D O'Keefe
Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer. Nature communications 15 (1) (2024)
Magdalena Unterer, Mohammadali Khan Mirzaei, Li Deng
Targeted Single-Phage Isolation Reveals Phage-Dependent Heterogeneous Infection Dynamics. Microbiology spectrum (2023)
Christian Willy, Joachim J Bugert, Annika Y Classen, Li Deng, Anja Düchting, Justus Gross, Jens André Hammerl, Imke H E Korf, Christian Kühn, Simone Lieberknecht-Jouy, Christine Rohde, Markus Rupp, Maria J G T Vehreschild, Kilian Vogele, Sarah Wienecke, Martin Witzenrath, Silvia Würstle, Holger Ziehr, Karin Moelling, Felix Broecker
Phage Therapy in Germany-Update 2023. Viruses 15 (2) (2023)
Jinlong Ru, Mohammadali Khan Mirzaei, Jinling Xue, Xue Peng, Li Deng
ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis. Gut microbes 15 (1) (2023)
Jianfeng Sun, Jinlong Ru, Lorenzo Ramos-Mucci, Fei Qi, Zihao Chen, Suyuan Chen, Adam P Cribbs, Li Deng, Xia Wang
DeepsmirUD: Prediction of Regulatory Effects on microRNA Expression Mediated by Small Molecules Using Deep Learning. International journal of molecular sciences 24 (3) (2023)
Christian Willy, Joachim J Bugert, Annika Y Classen, Li Deng, Anja Düchting, Justus Gross, Jens André Hammerl, Imke H E Korf, Christian Kühn, Simone Lieberknecht-Jouy, Christine Rohde, Markus Rupp, Maria J G T Vehreschild, Kilian Vogele, Sarah Wienecke, Martin Witzenrath, Silvia Würstle, Holger Ziehr, Karin Moelling, Felix Broecker
Phage Therapy in Germany-Update 2023. Viruses 15 (2) (2023)
Shiqi Luo, Jinlong Ru, Mohammadali Khan Mirzaei, Jinling Xue, Xue Peng, Anna Ralser, Joshua Lemuel Hadi, Raquel Mejías-Luque, Markus Gerhard, Li Deng
Helicobacter pylori infection alters gut virome by expanding temperate phages linked to increased risk of colorectal cancer. Gut (2023)
Shiqi Luo, Jinlong Ru, Mohammadali Khan Mirzaei, Jinling Xue, Xue Peng, Anna Ralser, Raquel Mejías Luque, Markus Gerhard, Li Deng
Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection. Gut microbes 15 (2) (2023)
Jianfeng Sun, Jinlong Ru, Lorenzo Ramos-Mucci, Fei Qi, Zihao Chen, Suyuan Chen, Adam P Cribbs, Li Deng, Xia Wang
DeepsmirUD: Prediction of Regulatory Effects on microRNA Expression Mediated by Small Molecules Using Deep Learning. International journal of molecular sciences 24 (3) (2023)
Jianfeng Sun, Jinlong Ru, Lorenzo Ramos-Mucci, Fei Qi, Zihao Chen, Suyuan Chen, Adam P Cribbs, Li Deng, Xia Wang
DeepsmirUD: Prediction of Regulatory Effects on microRNA Expression Mediated by Small Molecules Using Deep Learning. International journal of molecular sciences 24 (3) (2023)
Franziska Hufsky, Ana Barroso Abecasis, Patricia Agudelo-Romero, Magda Bletsa, Katherine Brown, Claudia Claus, Stefanie Deinhardt-Emmer, Li Deng, Caroline C Friedel, María Inés Gismondi, Evangelia Georgia Kostaki, Denise Kühnert, Urmila Kulkarni-Kale, Karin J Metzner, Irmtraud M Meyer, Laura Miozzi, Luca Nishimura, Sofia Paraskevopoulou, Alba Pérez-Cataluña, Janina Rahlff, Emma C Thomson, Charlotte Tumescheit, Lia van der Hoek, Lore Van Espen, Anne-Mieke Vandamme, Maryam Zaheri, Neta S Zuckerman, Manja Marz
Women in the European Virus Bioinformatics Center. Viruses 14 (7) (2022)
Winfried Goettsch, Niko Beerenwinkel, Li Deng, Lars Dölken, Bas E Dutilh, Florian Erhard, Lars Kaderali, Max von Kleist, Roland Marquet, Jelle Matthijnssens, Shawna McCallin, Dino P McMahon, Thomas Rattei, Ronald P Van Rij, David L Robertson, Martin Schwemmle, Noam Stern-Ginossar, Manja Marz
ITN-VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics. Viruses 13 (5) (2021)
Magdalena Unterer, Mohammadali Khan Mirzaei, Li Deng
Gut Phage Database: phage mining in the cave of wonders. Signal transduction and targeted therapy 6 (1) (2021)
Tianli Ma, Jinlong Ru, Jinling Xue, Sarah Schulz, Mohammadali Khan Mirzaei, Klaus-Peter Janssen, Michael Quante, Li Deng
Differences in Gut Virome Related to Barrett Esophagus and Esophageal Adenocarcinoma. Microorganisms 9 (8) (2021)
Judith Kaletta, Carolin Pickl, Christian Griebler, Andreas Klingl, Rainer Kurmayer, Li Deng
A rigorous assessment and comparison of enumeration methods for environmental viruses. Scientific reports 10 (1) (2020)
Rainer Kurmayer, Elisabeth Entfellner, Thomas Weisse, Martin Offterdinger, Andrea Rentmeister, Li Deng
Chemically labeled toxins or bioactive peptides show a heterogeneous intracellular distribution and low spatial overlap with autofluorescence in bloom-forming cyanobacteria. Scientific reports 10 (1) (2020)
Stephanie Jung, Karolin Fiona Kirsten Jacobs, Mikhail Shein, Anne Kathrin Schütz, Fabian Mohr, Herbert Stadler, Daniela Stadler, Aaron Michael Lucko, Sebastian Maximilian Altstetter, Florian Wilsch, Li Deng, Ulrike Protzer
Efficient and reproducible depletion of hepatitis B virus from plasma derived extracellular vesicles. Journal of extracellular vesicles 10 (2) (2020)
Mohammadali Khan Mirzaei, Li Deng
Sustainable Microbiome: a symphony orchestrated by synthetic phages. Microbial biotechnology 14 (1) (2020)
Mária Džunková, Soo Jen Low, Joshua N Daly, Li Deng, Christian Rinke, Philip Hugenholtz
Defining the human gut host-phage network through single-cell viral tagging. Nature microbiology 4 (12) (2019)

Li Deng.css-eqlu8i{font-size:small;padding-left:4px;} (L Deng)

Publication Activity (10 Years)

Top Topics

Top Venues

Li Deng (L Deng)