Matt J Keeling (Matt Keeling)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 57

Top Topics

Antimicrobial Resistance

Respiratory Syndrome Coronavirus

Top Venues

PLoS computational biology

Nature communications

Journal of the Royal Society, Interface

Royal Society open science

This page only lists publications with an associated author ORCID identifier.

Publications

Ronald E Crump, Maryam Aliee, Samuel A Sutherland, Ching-I Huang, Emily H Crowley, Simon E F Spencer, Matt J Keeling, Chansy Shampa, Erick Mwamba Miaka, Kat S Rock
Modelling timelines to elimination of sleeping sickness in the Democratic Republic of Congo, accounting for possible cryptic human and animal transmission. Parasites & vectors 17 (1) (2024)
Phoebe Asplin, Matt J Keeling, Rebecca Mancy, Edward M Hill
Epidemiological and health economic implications of symptom propagation in respiratory pathogens: A mathematical modelling investigation. PLoS computational biology 20 (5) (2024)
Harrison Manley, Thomas Bayley, Gabriel Danelian, Lucy Burton, Thomas Finnie, Andre Charlett, Nicholas A Watkins, Paul Birrell, Daniela De Angelis, Matt J Keeling, Sebastian Funk, Graham Medley, Lorenzo Pellis, Marc Baguelin, Graeme J Ackland, Johanna Hutchinson, Steven Riley, Jasmina Panovska-Griffiths
Combining models to generate consensus medium-term projections of hospital admissions, occupancy and deaths relating to COVID-19 in England. Royal Society open science 11 (2024)
Phoebe Asplin, Rebecca Mancy, Thomas Finnie, Fergus Cumming, Matt J Keeling, Edward M Hill
Symptom propagation in respiratory pathogens of public health concern: a review of the evidence. Journal of the Royal Society, Interface 21 (216) (2024)
Ronald E Crump, Maryam Aliee, Samuel A Sutherland, Ching-I Huang, Emily H Crowley, Simon E F Spencer, Matt J Keeling, Chansy Shampa, Erick Mwamba Miaka, Kat S Rock
Modelling timelines to elimination of sleeping sickness in the Democratic Republic of Congo, accounting for possible cryptic human and animal transmission. Parasites & vectors 17 (1) (2024)
Phoebe Asplin, Rebecca Mancy, Thomas Finnie, Fergus Cumming, Matt J Keeling, Edward M Hill
Symptom propagation in respiratory pathogens of public health concern: a review of the evidence. Journal of the Royal Society, Interface 21 (216) (2024)
Harrison Manley, Thomas Bayley, Gabriel Danelian, Lucy Burton, Thomas Finnie, Andre Charlett, Nicholas A Watkins, Paul Birrell, Daniela De Angelis, Matt J Keeling, Sebastian Funk, Graham Medley, Lorenzo Pellis, Marc Baguelin, Graeme J Ackland, Johanna Hutchinson, Steven Riley, Jasmina Panovska-Griffiths
Combining models to generate consensus medium-term projections of hospital admissions, occupancy and deaths relating to COVID-19 in England. Royal Society open science 11 (2024)
Phoebe Asplin, Rebecca Mancy, Thomas Finnie, Fergus Cumming, Matt J Keeling, Edward M Hill
Symptom propagation in respiratory pathogens of public health concern: a review of the evidence. Journal of the Royal Society, Interface 21 (216) (2024)
Phoebe Asplin, Matt J Keeling, Rebecca Mancy, Edward M Hill
Epidemiological and health economic implications of symptom propagation in respiratory pathogens: A mathematical modelling investigation. PLoS computational biology 20 (5) (2024)
Phoebe Asplin, Matt J Keeling, Rebecca Mancy, Edward M Hill
Epidemiological and health economic implications of symptom propagation in respiratory pathogens: A mathematical modelling investigation. PLoS computational biology 20 (5) (2024)
Phoebe Asplin, Matt J Keeling, Rebecca Mancy, Edward M Hill
Epidemiological and health economic implications of symptom propagation in respiratory pathogens: A mathematical modelling investigation. PLoS computational biology 20 (5) (2024)
Samuel P C Brand, Massimo Cavallaro, Fergus Cumming, Charlie Turner, Isaac Florence, Paula Blomquist, Joe Hilton, Laura M Guzman-Rincon, Thomas A House, David James Nokes, Matt J Keeling
The role of vaccination and public awareness in forecasts of Mpox incidence in the United Kingdom. Nature communications 14 (1) (2023)
Matt J Keeling, Samuel Moore, Bridget S Penman, Edward M Hill
The impacts of SARS-CoV-2 vaccine dose separation and targeting on the COVID-19 epidemic in England. Nature communications 14 (1) (2023)
Massimo Cavallaro, Louise Dyson, Michael J Tildesley, Dan Todkill, Matt J Keeling
Spatio-temporal surveillance and early detection of SARS-CoV-2 variants of concern: a retrospective analysis. Journal of the Royal Society, Interface 20 (208) (2023)
Matt J Keeling, Samuel Moore, Bridget S Penman, Edward M Hill
The impacts of SARS-CoV-2 vaccine dose separation and targeting on the COVID-19 epidemic in England. Nature communications 14 (1) (2023)
Matt J Keeling, Samuel Moore, Bridget S Penman, Edward M Hill
The impacts of SARS-CoV-2 vaccine dose separation and targeting on the COVID-19 epidemic in England. Nature communications 14 (1) (2023)
David Helekal, Matt J Keeling, Yonatan Hagai Grad, Xavier Didelot
Estimating the fitness cost and benefit of antimicrobial resistance from pathogen genomic data. Journal of the Royal Society, Interface 20 (203) (2023)
Hannah Littlecott, Clare Herd, John O'Rourke, Lina Toncon Chaparro, Matt J Keeling, G James Rubin, Elizabeth Fearon
Effectiveness of testing, contact tracing and isolation interventions among the general population on reducing transmission of SARS-CoV-2: a systematic review. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences 381 (2257) (2023)
Matt J Keeling, Samuel Moore, Bridget S Penman, Edward M Hill
The impacts of SARS-CoV-2 vaccine dose separation and targeting on the COVID-19 epidemic in England. Nature communications 14 (1) (2023)
Matt J Keeling, Samuel Moore, Bridget S Penman, Edward M Hill
The impacts of SARS-CoV-2 vaccine dose separation and targeting on the COVID-19 epidemic in England. Nature communications 14 (1) (2023)
Ching-I Huang, Ronald E Crump, Paul E Brown, Simon E F Spencer, Erick Mwamba Miaka, Chansy Shampa, Matt J Keeling, Kat S Rock
Identifying regions for enhanced control of gambiense sleeping sickness in the Democratic Republic of Congo. Nature communications 13 (1) (2022)
Michael J Tildesley, Anna Vassall, Steven Riley, Mark Jit, Frank Sandmann, Edward M Hill, Robin N Thompson, Benjamin D Atkins, John Edmunds, Louise Dyson, Matt J Keeling
Optimal health and economic impact of non-pharmaceutical intervention measures prior and post vaccination in England: a mathematical modelling study. Royal Society open science 9 (8) (2022)
Matt J Keeling, Sam E Moore
An assessment of the vaccination of school-aged children in England against SARS-CoV-2. BMC medicine 20 (1) (2022)
Massimo Cavallaro, Juliana Coelho, Derren Ready, Valerie Decraene, Theresa Lamagni, Noel D McCarthy, Dan Todkill, Matt J Keeling
Cluster detection with random neighbourhood covering: Application to invasive Group A Streptococcal disease. PLoS computational biology 18 (11) (2022)
Lorenzo Pellis, Paul J Birrell, Joshua Blake, Christopher E Overton, Francesca Scarabel, Helena B Stage, Ellen Brooks-Pollock, Leon Danon, Ian Hall, Thomas A House, Matt J Keeling, Jonathan M Read, null null, Daniela De Angelis
Estimation of reproduction numbers in real time: Conceptual and statistical challenges. Journal of the Royal Statistical Society. Series A, (Statistics in Society) 185 (Suppl 1) (2022)
Trystan Leng, Edward M Hill, Robin N Thompson, Michael J Tildesley, Matt J Keeling, Louise Dyson
Assessing the impact of lateral flow testing strategies on within-school SARS-CoV-2 transmission and absences: A modelling study. PLoS computational biology 18 (5) (2022)
Trystan Leng, Edward M Hill, Alex Holmes, Emma Southall, Robin N Thompson, Michael J Tildesley, Matt J Keeling, Louise Dyson
Quantifying pupil-to-pupil SARS-CoV-2 transmission and the impact of lateral flow testing in English secondary schools. Nature communications 13 (1) (2022)
Matt J Keeling, Louise Dyson, Michael J Tildesley, Edward M Hill, Samuel Moore
Comparison of the 2021 COVID-19 roadmap projections against public health data in England. Nature communications 13 (1) (2022)
Joe Hilton, Heather Riley, Lorenzo Pellis, Rabia Aziza, Samuel P C Brand, Ivy K Kombe, John Ojal, Andrea Parisi, Matt J Keeling, David James Nokes, Robert Manson-Sawko, Thomas House
A computational framework for modelling infectious disease policy based on age and household structure with applications to the COVID-19 pandemic. PLoS computational biology 18 (9) (2022)
John Ojal, Samuel P C Brand, Vincent Were, Emelda A Okiro, Ivy K Kombe, Caroline Mburu, Rabia Aziza, Morris Ogero, Ambrose Agweyu, George M Warimwe, Sophie Uyoga, Ifedayo M O Adetifa, J Anthony G Scott, Edward Otieno, Lynette I Ochola-Oyier, Charles N Agoti, Kadondi Kasera, Patrick Amoth, Mercy Mwangangi, Rashid Aman, Wangari Ng'ang'a, Benjamin Tsofa, Philip Bejon, Edwine Barasa, Matt J Keeling, David James Nokes
Revealing the extent of the first wave of the COVID-19 pandemic in Kenya based on serological and PCR-test data. Wellcome open research 6 (2022)
Trystan Leng, Edward M Hill, Matt J Keeling, Michael J Tildesley, Robin N Thompson
The effect of notification window length on the epidemiological impact of COVID-19 contact tracing mobile applications. Communications medicine 2 (2022)
Edward M Hill, Matt J Keeling
Comparison between one and two dose SARS-CoV-2 vaccine prioritization for a fixed number of vaccine doses. Journal of the Royal Society, Interface 18 (182) (2021)
Edward M Hill, Benjamin D Atkins, Matt J Keeling, Louise Dyson, Michael J Tildesley
A network modelling approach to assess non-pharmaceutical disease controls in a worker population: An application to SARS-CoV-2. PLoS computational biology 17 (6) (2021)
Massimo Cavallaro, Haseeb Moiz, Matt J Keeling, Noel D McCarthy
Contrasting factors associated with COVID-19-related ICU admission and death outcomes in hospitalised patients by means of Shapley values. PLoS computational biology 17 (6) (2021)
Sam Moore, Edward M Hill, Louise Dyson, Michael J Tildesley, Matt J Keeling
Modelling optimal vaccination strategy for SARS-CoV-2 in the UK. PLoS computational biology 17 (5) (2021)
John Ojal, Samuel P C Brand, Vincent Were, Emelda A Okiro, Ivy K Kombe, Caroline Mburu, Rabia Aziza, Morris Ogero, Ambrose Agweyu, George M Warimwe, Sophie Uyoga, Ifedayo M O Adetifa, J Anthony G Scott, Edward Otieno, Lynette I Ochola-Oyier, Charles N Agoti, Kadondi Kasera, Patrick Amoth, Mercy Mwangangi, Rashid Aman, Wangari Ng'ang'a, Benjamin Tsofa, Philip Bejon, Edwine Barasa, Matt J Keeling, David James Nokes
Revealing the extent of the first wave of the COVID-19 pandemic in Kenya based on serological and PCR-test data. Wellcome open research 6 (2021)
Warren S D Tennant, Eric Cardinale, Catherine Cêtre-Sossah, Youssouf Moutroifi, Gilles Le Godais, Davide Colombi, Simon E F Spencer, Michael J Tildesley, Matt J Keeling, Onzade Charafouddine, Vittoria Colizza, W John Edmunds, Raphaëlle Métras
Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape. Nature communications 12 (1) (2021)
Tim W R Möhlmann, Matt J Keeling, Uno Wennergren, Guido Favia, Inge Santman-Berends, Willem Takken, Constantianus J M Koenraadt, Samuel P C Brand
Biting midge dynamics and bluetongue transmission: a multiscale model linking catch data with climate and disease outbreaks. Scientific reports 11 (1) (2021)
Louise Dyson, Edward M Hill, Sam Moore, Jacob Curran-Sebastian, Michael J Tildesley, Katrina A Lythgoe, Thomas A House, Lorenzo Pellis, Matt J Keeling
Possible future waves of SARS-CoV-2 infection generated by variants of concern with a range of characteristics. Nature communications 12 (1) (2021)
Andrea Parisi, Samuel P C Brand, Joe Hilton, Rabia Aziza, Matt J Keeling, David James Nokes
Spatially resolved simulations of the spread of COVID-19 in three European countries. PLoS computational biology 17 (7) (2021)
Matt J Keeling, Edward M Hill, Erin E Gorsich, Bridget S Penman, Glen Guyver-Fletcher, Alex Holmes, Trystan Leng, Hector McKimm, Massimiliano Tamborrino, Louise Dyson, Michael J Tildesley
Predictions of COVID-19 dynamics in the UK: Short-term forecasting and analysis of potential exit strategies. PLoS computational biology 17 (1) (2021)
Maryam Aliee, Matt J Keeling, Kat S Rock
Modelling to explore the potential impact of asymptomatic human infections on transmission and dynamics of African sleeping sickness. PLoS computational biology 17 (9) (2021)
Ronald E Crump, Ching-I Huang, Edward S Knock, Simon E F Spencer, Paul E Brown, Erick Mwamba Miaka, Chansy Shampa, Matt J Keeling, Kat S Rock
Quantifying epidemiological drivers of gambiense human African Trypanosomiasis across the Democratic Republic of Congo. PLoS computational biology 17 (1) (2021)
Christopher N Davis, Matt J Keeling, Kat S Rock
Modelling gambiense human African trypanosomiasis infection in villages of the Democratic Republic of Congo using Kolmogorov forward equations. Journal of the Royal Society, Interface 18 (183) (2021)
Samuel P C Brand, John Ojal, Rabia Aziza, Vincent Omondi Were, Emelda A Okiro, Ivy K Kombe, Caroline Mburu, Morris Ogero, Ambrose Agweyu, George M Warimwe, James Nyagwange, Henry K Karanja, John N Gitonga, Daisy Mugo, Sophie Uyoga, Ifedayo M O Adetifa, J Anthony G Scott, Edward Otieno, Nickson Murunga, Mark Otiende, Lynette Isabella Ochola-Oyier, Charles N Agoti, George Githinji, Kadondi Kasera, Patrick Amoth, Mercy Mwangangi, Rashid Aman, Wangari Ng'ang'a, Benjamin Tsofa, Philip Bejon, Matt J Keeling, David James Nokes, Edwine W Barasa
COVID-19 transmission dynamics underlying epidemic waves in Kenya. Science (New York, N.Y.) 374 (6570) (2021)
Matt J Keeling, T Deirdre Hollingsworth, Jonathan M Read
Efficacy of contact tracing for the containment of the 2019 novel coronavirus (COVID-19). Journal of epidemiology and community health 74 (10) (2020)
Joe Hilton, Matt J Keeling
Estimation of country-level basic reproductive ratios for novel Coronavirus (SARS-CoV-2/COVID-19) using synthetic contact matrices. PLoS computational biology 16 (7) (2020)
Edward M Hill, Stavros Petrou, Henry Forster, Simon de Lusignan, Ivelina Yonova, Matt J Keeling
Optimising age coverage of seasonal influenza vaccination in England: A mathematical and health economic evaluation. PLoS computational biology 16 (10) (2020)
Christopher N Davis, Kat S Rock, Erick Mwamba Miaka, Matt J Keeling
Village-scale persistence and elimination of gambiense human African trypanosomiasis. PLoS neglected tropical diseases 13 (10) (2019)
Edward M Hill, Stavros Petrou, Simon de Lusignan, Ivelina Yonova, Matt J Keeling
Seasonal influenza: Modelling approaches to capture immunity propagation. PLoS computational biology 15 (10) (2019)
Michael A Irvine, James C Bull, Matt J Keeling
Conservation of pattern as a tool for inference on spatial snapshots in ecological data. Scientific reports 8 (1) (2018)
Matt J Keeling, Samik Datta, Daniel N Franklin, Ivor Flatman, Andy Wattam, Mike Brown, Giles E Budge
Efficient use of sentinel sites: detection of invasive honeybee pests and diseases in the UK. Journal of the Royal Society, Interface 14 (129) (2018)
Stefan Sellman, Kimberly Tsao, Michael J Tildesley, Peter Brommesson, Colleen T Webb, Uno Wennergren, Matt J Keeling, Tom Lindström
Need for speed: An optimized gridding approach for spatially explicit disease simulations. PLoS computational biology 14 (4) (2018)
Matt J Keeling, Daniel N Franklin, Samik Datta, Mike A Brown, Giles E Budge
Predicting the spread of the Asian hornet (Vespa velutina) following its incursion into Great Britain. Scientific reports 7 (1) (2017)
Samuel P C Brand, Matt J Keeling
The impact of temperature changes on vector-borne disease transmission: Culicoides midges and bluetongue virus. Journal of the Royal Society, Interface 14 (128) (2017)
Naomi V Bradbury, William J M Probert, Katriona Shea, Michael C Runge, Christopher J Fonnesbeck, Matt J Keeling, Matthew J Ferrari, Michael J Tildesley
Quantifying the Value of Perfect Information in Emergency Vaccination Campaigns. PLoS computational biology 13 (2) (2017)
Matt J Keeling, Thomas A House, Alison J Cooper, Lorenzo Pellis
Systematic Approximations to Susceptible-Infectious-Susceptible Dynamics on Networks. PLoS computational biology 12 (12) (2016)