Matthew D Shoulders

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 36

Top Topics

Endoplasmic Reticulum

Single Molecule

Top Venues

Science advances

Life science alliance

Journal of the American Chemical Society

This page only lists publications with an associated author ORCID identifier.

Publications

Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications. eLife 12 (2024)
Kathryn M Yammine, Sophia Mirda Abularach, Seo-Yeon Kim, Agata A Bikovtseva, Jinia Lilianty, Vincent L Butty, Richard P Schiavoni, John F Bateman, Shireen R Lamandé, Matthew D Shoulders
ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis. Life science alliance 7 (9) (2024)
Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications. eLife 12 (2024)
Kathryn M Yammine, Sophia Mirda Abularach, Seo-Yeon Kim, Agata A Bikovtseva, Jinia Lilianty, Vincent L Butty, Richard P Schiavoni, John F Bateman, Shireen R Lamandé, Matthew D Shoulders
ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis. Life science alliance 7 (9) (2024)
Kathryn M Yammine, Sophia Mirda Abularach, Seo-Yeon Kim, Agata A Bikovtseva, Jinia Lilianty, Vincent L Butty, Richard P Schiavoni, John F Bateman, Shireen R Lamandé, Matthew D Shoulders
ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis. Life science alliance 7 (9) (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Amanuella A Mengiste, Julie L McDonald, Minh Thuan Nguyen Tran, Anna V Plank, Robert H Wilson, Vincent L Butty, Matthew D Shoulders
MutaT7 GDE : A Single Chimera for the Targeted, Balanced, Efficient, and Processive Installation of All Possible Transition Mutations In Vivo . ACS synthetic biology (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications. eLife 12 (2024)
Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications. eLife 12 (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Kathryn M Yammine, Sophia Mirda Abularach, Seo-Yeon Kim, Agata A Bikovtseva, Jinia Lilianty, Vincent L Butty, Richard P Schiavoni, John F Bateman, Shireen R Lamandé, Matthew D Shoulders
ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis. Life science alliance 7 (9) (2024)
Jimin Yoon, Yu Meng Zhang, Cheenou Her, Robert A Grant, Anna I Ponomarenko, Bryce E Ackermann, Tiffani Hui, Yu-Shan Lin, Galia T Debelouchina, Matthew D Shoulders
The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure. Science advances 10 (16) (2024)
Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability for low-dimensional fitness landscapes toward new metrics for antimicrobial applications. eLife 12 (2024)
Kathryn M Yammine, Sophia Mirda Abularach, Seo-Yeon Kim, Agata A Bikovtseva, Jinia Lilianty, Vincent L Butty, Richard P Schiavoni, John F Bateman, Shireen R Lamandé, Matthew D Shoulders
ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis. Life science alliance 7 (9) (2024)
Rafael F Guerrero, Tandin Dorji, Ra'Mal M Harris, Matthew D Shoulders, C Brandon Ogbunugafor
Evolutionary druggability: leveraging low-dimensional fitness landscapes towards new metrics for antimicrobial applications. bioRxiv : the preprint server for biology (2023)
Amanuella A Mengiste, Robert H Wilson, Rachel F Weissman, Louis J Papa Iii, Samuel J Hendel, Christopher L Moore, Vincent L Butty, Matthew D Shoulders
Expanded MutaT7 toolkit efficiently and simultaneously accesses all possible transition mutations in bacteria. Nucleic acids research (2023)
Amanuella A Mengiste, Robert H Wilson, Rachel F Weissman, Louis J Papa Iii, Samuel J Hendel, Christopher L Moore, Vincent L Butty, Matthew D Shoulders
Expanded MutaT7 toolkit efficiently and simultaneously accesses all possible transition mutations in bacteria. Nucleic acids research (2023)
C Brandon Ogbunugafor, Rafael F Guerrero, Eugene I Shakhnovich, Matthew D Shoulders
Epistasis meets pleiotropy in shaping biophysical protein subspaces associated with antimicrobial resistance. bioRxiv : the preprint server for biology (2023)
Dustin T King, Jesús E Serrano-Negrón, Yanping Zhu, Christopher L Moore, Matthew D Shoulders, Leonard J Foster, David J Vocadlo
Thermal Proteome Profiling Reveals the O-GlcNAc-Dependent Meltome. Journal of the American Chemical Society 144 (9) (2022)
Jimin Yoon, Emmanuel E Nekongo, Jessica E Patrick, Tiffani Hui, Angela M Phillips, Anna I Ponomarenko, Samuel J Hendel, Rebecca M Sebastian, Yu Meng Zhang, Vincent L Butty, C Brandon Ogbunugafor, Yu-Shan Lin, Matthew D Shoulders
The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope. PLoS biology 20 (2) (2022)
Samuel J Hendel, Matthew D Shoulders
Directed evolution in mammalian cells. Nature methods 18 (4) (2021)
Emmanuel E Nekongo, Anna I Ponomarenko, Mahender B Dewal, Vincent L Butty, Edward P Browne, Matthew D Shoulders
HSF1 Activation Can Restrict HIV Replication. ACS infectious diseases 6 (7) (2020)
Ngoc-Duc Doan, Azade S Hosseini, Agata A Bikovtseva, Michelle S Huang, Andrew S DiChiara, Louis J Papa, Antonius Koller, Matthew D Shoulders
Elucidation of proteostasis defects caused by osteogenesis imperfecta mutations in the collagen-α2(I) C-propeptide domain. The Journal of biological chemistry 295 (29) (2020)
Madeline Y Wong, Ngoc Duc Doan, Andrew S DiChiara, Louis J Papa, Jaime H Cheah, Christian K Soule, Nicki Watson, John D Hulleman, Matthew D Shoulders
A High-Throughput Assay for Collagen Secretion Suggests an Unanticipated Role for Hsp90 in Collagen Production. Biochemistry 57 (19) (2018)
Angela M Phillips, Michael B Doud, Luna O Gonzalez, Vincent L Butty, Yu-Shan Lin, Jesse D Bloom, Matthew D Shoulders
Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin. eLife 7 (2018)
Chet M Berman, Louis J Papa, Samuel J Hendel, Christopher L Moore, Patreece H Suen, Alexander F Weickhardt, Ngoc-Duc Doan, Caiden M Kumar, Taco G Uil, Vincent L Butty, Robert C Hoeben, Matthew D Shoulders
An Adaptable Platform for Directed Evolution in Human Cells. Journal of the American Chemical Society 140 (51) (2018)
Christopher E R Richardson, Lisa S Cunden, Vincent L Butty, Elizabeth M Nolan, Stephen J Lippard, Matthew D Shoulders
A Method for Selective Depletion of Zn(II) Ions from Complex Biological Media and Evaluation of Cellular Consequences of Zn(II) Deficiency. Journal of the American Chemical Society 140 (7) (2018)
Christopher E R Richardson, Elizabeth M Nolan, Matthew D Shoulders, Stephen J Lippard
A Sensitive, Nonradioactive Assay for Zn(II) Uptake into Metazoan Cells. Biochemistry 57 (50) (2018)
Andrew S DiChiara, Rasia C Li, Patreece H Suen, Azade S Hosseini, Rebecca J Taylor, Alexander F Weickhardt, Diya Malhotra, Darrell R McCaslin, Matthew D Shoulders
A cysteine-based molecular code informs collagen C-propeptide assembly. Nature communications 9 (1) (2018)
Angela M Phillips, Anna I Ponomarenko, Kenny Chen, Orr Ashenberg, Jiayuan Miao, Sean M McHugh, Vincent L Butty, Charles A Whittaker, Christopher L Moore, Jesse D Bloom, Yu-Shan Lin, Matthew D Shoulders
Destabilized adaptive influenza variants critical for innate immune system escape are potentiated by host chaperones. PLoS biology 16 (9) (2018)
Kyle S Cole, Julia M D Grandjean, Kenny Chen, Collin H Witt, Johanna O'Day, Matthew D Shoulders, R Luke Wiseman, Eranthie Weerapana
Characterization of an A-Site Selective Protein Disulfide Isomerase A1 Inhibitor. Biochemistry 57 (13) (2018)
Christopher L Moore, Louis J Papa, Matthew D Shoulders
A Processive Protein Chimera Introduces Mutations across Defined DNA Regions In Vivo. Journal of the American Chemical Society 140 (37) (2018)
Angela M Phillips, Luna O Gonzalez, Emmanuel E Nekongo, Anna I Ponomarenko, Sean M McHugh, Vincent L Butty, Stuart S Levine, Yu-Shan Lin, Leonid A Mirny, Matthew D Shoulders
Host proteostasis modulates influenza evolution. eLife 6 (2017)