Matthew J Simpson (Matthew Simpson, M J Simpson)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 61

Top Venues

Bulletin of mathematical biology

Proceedings. Mathematical, physical, and engineering sciences

PLoS computational biology

Journal of the Royal Society, Interface

Queensland University of Technology

University of Western Australia (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Queensland University of Technology Aug 01 2014

Australia

Professor :: Mathematical Sciences

Queensland University of Technology Aug 01 2013 - Aug 01 2014

Australia

Associate Professor :: Mathematical Sciences

Queensland University of Technology Aug 01 2011 - Aug 01 2013

Australia

Senior Lecturer :: Mathematical Sciences

Queensland University of Technology Jan 01 2010 - Aug 01 2011

Australia

Lecturer :: Mathematical Sciences

University of Melbourne Jul 01 2006 - Dec 31 2009

Australia

Australian Research Council Postdoctoral Fellow :: Department of Mathematics and Statistics

University of Melbourne Aug 24 2003 - Jun 30 2006

Australia

Research Fellow :: Department of Mathematics and Statistics

Education History

University of Western Australia Feb 10 2000 - Aug 10 2003

Australia

PHD :: Centre for Water Research

Publications

Ryan J Murphy, Oliver J Maclaren, Matthew J Simpson
Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis and prediction in the life sciences. Journal of the Royal Society, Interface 21 (210) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Ryan J Murphy, Oliver J Maclaren, Matthew J Simpson
Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis and prediction in the life sciences. Journal of the Royal Society, Interface 21 (210) (2024)
Michael J Plank, Matthew J Simpson
Structured methods for parameter inference and uncertainty quantification for mechanistic models in the life sciences. Royal Society open science 11 (8) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Ryan J Murphy, Oliver J Maclaren, Matthew J Simpson
Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis and prediction in the life sciences. Journal of the Royal Society, Interface 21 (210) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Ryan J Murphy, Oliver J Maclaren, Matthew J Simpson
Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis and prediction in the life sciences. Journal of the Royal Society, Interface 21 (210) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Matthew J Simpson, Keeley M Murphy, Scott W McCue, Pascal R Buenzli
Discrete and continuous mathematical models of sharp-fronted collective cell migration and invasion. Royal Society open science 11 (5) (2024)
Michael J Plank, Matthew J Simpson
Structured methods for parameter inference and uncertainty quantification for mechanistic models in the life sciences. Royal Society open science 11 (8) (2024)
Matthew J Simpson, Keeley M Murphy, Scott W McCue, Pascal R Buenzli
Discrete and continuous mathematical models of sharp-fronted collective cell migration and invasion. Royal Society open science 11 (5) (2024)
Matthew J Simpson, Oliver J Maclaren
Making Predictions Using Poorly Identified Mathematical Models. Bulletin of mathematical biology 86 (7) (2024)
Matthew J Simpson, Oliver J Maclaren
Profile-Wise Analysis: A profile likelihood-based workflow for identifiability analysis, estimation, and prediction with mechanistic mathematical models. PLoS computational biology 19 (9) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. PLoS computational biology 19 (1) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. PLoS computational biology 19 (1) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Formation and Growth of Co-Culture Tumour Spheroids: New Compartment-Based Mathematical Models and Experiments. Bulletin of mathematical biology 86 (1) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. PLoS computational biology 19 (1) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. PLoS computational biology 19 (1) (2023)
Ryan J Murphy, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Growth and adaptation mechanisms of tumour spheroids with time-dependent oxygen availability. PLoS computational biology 19 (1) (2023)
Ryan J Murphy, Oliver J Maclaren, Alivia R Calabrese, Patrick B Thomas, David J Warne, Elizabeth D Williams, Matthew J Simpson
Computationally efficient framework for diagnosing, understanding and predicting biphasic population growth. Journal of the Royal Society, Interface 19 (197) (2022)
Jonah J Klowss, Alexander P Browning, Ryan J Murphy, Elliot J Carr, Michael J Plank, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
A stochastic mathematical model of 4D tumour spheroids with real-time fluorescent cell cycle labelling. Journal of the Royal Society, Interface 19 (189) (2022)
Jesse A Sharp, Alexander P Browning, Kevin Burrage, Matthew J Simpson
Parameter estimation and uncertainty quantification using information geometry. Journal of the Royal Society, Interface 19 (189) (2022)
Alexander P Browning, Christopher C Drovandi, Ian W Turner, Adrianne L Jenner, Matthew J Simpson
Efficient inference and identifiability analysis for differential equation models with random parameters. PLoS computational biology 18 (11) (2022)
Yifei Li, Pascal R Buenzli, Matthew J Simpson
Interpreting how nonlinear diffusion affects the fate of bistable populations using a discrete modelling framework. Proceedings. Mathematical, physical, and engineering sciences 478 (2262) (2022)
Alexander P Browning, Niloufar Ansari, Christopher C Drovandi, Angus P R Johnston, Matthew J Simpson, Adrianne L Jenner
Identifying cell-to-cell variability in internalization using flow cytometry. Journal of the Royal Society, Interface 19 (190) (2022)
Ryan J Murphy, Alexander P Browning, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
Designing and interpreting 4D tumour spheroid experiments. Communications biology 5 (1) (2022)
Maud El-Hachem, Scott W McCue, Matthew J Simpson
A Continuum Mathematical Model of Substrate-Mediated Tissue Growth. Bulletin of mathematical biology 84 (4) (2022)
Daniel J VandenHeuvel, Christopher C Drovandi, Matthew J Simpson
Computationally efficient mechanism discovery for cell invasion with uncertainty quantification. PLoS computational biology 18 (11) (2022)
Yifei Li, Stuart T Johnston, Pascal R Buenzli, Peter van Heijster, Matthew J Simpson
Extinction of Bistable Populations is Affected by the Shape of their Initial Spatial Distribution. Bulletin of mathematical biology 84 (1) (2021)
Elliot J Carr, Jacob M Ryan, Matthew J Simpson
Diffusion in heterogeneous discs and spheres: New closed-form expressions for exit times and homogenization formulas. The Journal of chemical physics 153 (7) (2021)
Ryan J Murphy, Pascal R Buenzli, Tamara A Tambyah, Erik W Thompson, Honor J Hugo, Ruth E Baker, Matthew J Simpson
The role of mechanical interactions in EMT. Physical biology 18 (4) (2021)
Matthew J Simpson, Alexander P Browning, Christopher C Drovandi, Elliot J Carr, Oliver J Maclaren, Ruth E Baker
Profile likelihood analysis for a stochastic model of diffusion in heterogeneous media. Proceedings. Mathematical, physical, and engineering sciences 477 (2250) (2021)
Maud El-Hachem, Scott W McCue, Matthew J Simpson
Invading and Receding Sharp-Fronted Travelling Waves. Bulletin of mathematical biology 83 (4) (2021)
Sean T Vittadello, Scott W McCue, Gency Gunasingh, Nikolas K Haass, Matthew J Simpson
A novel mathematical model of heterogeneous cell proliferation. Journal of mathematical biology 82 (5) (2021)
Simon F Martina-Perez, Matthew J Simpson, Ruth E Baker
Bayesian uncertainty quantification for data-driven equation learning. Proceedings. Mathematical, physical, and engineering sciences 477 (2254) (2021)
Wang Jin, Loredana Spoerri, Nikolas K Haass, Matthew J Simpson
Mathematical Model of Tumour Spheroid Experiments with Real-Time Cell Cycle Imaging. Bulletin of mathematical biology 83 (5) (2021)
Michael J Carr, Matthew J Simpson, Christopher C Drovandi
Estimating parameters of a stochastic cell invasion model with fluorescent cell cycle labelling using approximate Bayesian computation. Journal of the Royal Society, Interface 18 (182) (2021)
Alexander P Browning, Jesse A Sharp, Ryan J Murphy, Gency Gunasingh, Brodie Lawson, Kevin Burrage, Nikolas K Haass, Matthew J Simpson
Quantitative analysis of tumour spheroid structure. eLife 10 (2021)
Nabil T Fadai, Stuart T Johnston, Matthew J Simpson
Unpacking the Allee effect: determining individual-level mechanisms that drive global population dynamics. Proceedings. Mathematical, physical, and engineering sciences 476 (2241) (2020)
Ryan J Murphy, Pascal R Buenzli, Ruth E Baker, Matthew J Simpson
Mechanical Cell Competition in Heterogeneous Epithelial Tissues. Bulletin of mathematical biology 82 (10) (2020)
John H Lagergren, John T Nardini, Ruth E Baker, Matthew J Simpson, Kevin B Flores
Biologically-informed neural networks guide mechanistic modeling from sparse experimental data. PLoS computational biology 16 (12) (2020)
Anudeep Surendran, Michael J Plank, Matthew J Simpson
Population dynamics with spatial structure and an Allee effect. Proceedings. Mathematical, physical, and engineering sciences 476 (2242) (2020)
Tamara A Tambyah, Ryan J Murphy, Pascal R Buenzli, Matthew J Simpson
A free boundary mechanobiological model of epithelial tissues. Proceedings. Mathematical, physical, and engineering sciences 476 (2243) (2020)
Stuart T Johnston, Matthew J Simpson, Edmund J Crampin
Predicting population extinction in lattice-based birth-death-movement models. Proceedings. Mathematical, physical, and engineering sciences 476 (2238) (2020)
Nabil T Fadai, Matthew J Simpson
Population Dynamics with Threshold Effects Give Rise to a Diverse Family of Allee Effects. Bulletin of mathematical biology 82 (6) (2020)
Maud El-Hachem, Scott W McCue, Wang Jin, Yihong Du, Matthew J Simpson
Revisiting the Fisher-Kolmogorov-Petrovsky-Piskunov equation to interpret the spreading-extinction dichotomy. Proceedings. Mathematical, physical, and engineering sciences 475 (2229) (2019)
David J Warne, Ruth E Baker, Matthew J Simpson
Using Experimental Data and Information Criteria to Guide Model Selection for Reaction-Diffusion Problems in Mathematical Biology. Bulletin of mathematical biology 81 (6) (2019)
Alexander P Browning, Francis G Woodhouse, Matthew J Simpson
Reversible signal transmission in an active mechanical metamaterial. Proceedings. Mathematical, physical, and engineering sciences 475 (2227) (2019)
Ryan J Murphy, Pascal R Buenzli, Ruth E Baker, Matthew J Simpson
A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation. Proceedings. Mathematical, physical, and engineering sciences 475 (2227) (2019)
Elliot J Carr, Matthew J Simpson
New homogenization approaches for stochastic transport through heterogeneous media. The Journal of chemical physics 150 (4) (2019)
Anudeep Surendran, Michael J Plank, Matthew J Simpson
Spatial Moment Description of Birth-Death-Movement Processes Incorporating the Effects of Crowding and Obstacles. Bulletin of mathematical biology 80 (11) (2018)
Alexander P Browning, Parvathi Haridas, Matthew J Simpson
A Bayesian Sequential Learning Framework to Parameterise Continuum Models of Melanoma Invasion into Human Skin. Bulletin of mathematical biology 81 (3) (2018)
Andrew Parker, Matthew J Simpson, Ruth E Baker
The impact of experimental design choices on parameter inference for models of growing cell colonies. Royal Society open science 5 (8) (2018)
Oleksii M Matsiaka, Catherine J Penington, Ruth E Baker, Matthew J Simpson
Discrete and Continuum Approximations for Collective Cell Migration in a Scratch Assay with Cell Size Dynamics. Bulletin of mathematical biology 80 (4) (2018)
Parvathi Haridas, Alexander P Browning, Jacqui A McGovern, D L Sean McElwain, Matthew J Simpson
Three-dimensional experiments and individual based simulations show that cell proliferation drives melanoma nest formation in human skin tissue. BMC systems biology 12 (1) (2018)
Wang Jin, Catherine J Penington, Scott W McCue, Matthew J Simpson
A computational modelling framework to quantify the effects of passaging cell lines. PloS one 12 (7) (2017)
Alexander P Browning, Scott W McCue, Matthew J Simpson
A Bayesian Computational Approach to Explore the Optimal Duration of a Cell Proliferation Assay. Bulletin of mathematical biology 79 (8) (2017)
Matthew J Simpson, Kai-Yin Lo, Yung-Shin Sun
Quantifying the roles of random motility and directed motility using advection-diffusion theory for a 3T3 fibroblast cell migration assay stimulated with an electric field. BMC systems biology 11 (1) (2017)
Matthew J Simpson, Sean McInerney, Elliot J Carr, Leila Cuttle
Quantifying the efficacy of first aid treatments for burn injuries using mathematical modelling and in vivo porcine experiments. Scientific reports 7 (1) (2017)

Matthew J Simpson.css-eqlu8i{font-size:small;padding-left:4px;} (Matthew Simpson, M J Simpson)

Publication Activity (10 Years)

Top Topics

Top Venues

Matthew J Simpson (Matthew Simpson, M J Simpson)