John W Hickey (John Hickey)

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 24

Top Topics

Nlrp Inflammasome

Top Venues

bioRxiv : the preprint server for biology

Cancer discovery

Research square

Nature cell biology

This page only lists publications with an associated author ORCID identifier.

Publications

Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Nikki Bialy, Frank Alber, Brenda J Andrews, Michael Angelo, Brian J Beliveau, Lacramioara Bintu, Alistair Nicol Boettiger, Ulrike Boehm, Claire M Brown, Mahmoud Bukar Maina, James J Chambers, Beth A Cimini, Kevin W Eliceiri, Rachel Errington, Orestis Faklaris, Nathalie Gaudreault, Ronald N Germain, Wojtek J Goscinski, David Grünwald, Michael Halter, Dorit Hanein, John W Hickey, Judith Lacoste, Alex Laude, Emma Lundberg, Jian Ma, Leonel Malacrida, Josh Moore, Glyn Nelson, Elizabeth Kathleen Neumann, Roland Nitschke, Shuichi Onami, Jaime A Pimentel, Anne L Plant, Andrea J Radtke, Bikash Sabata, Denis Schapiro, Johannes Schöneberg, Jeffrey M Spraggins, Damir Sudar, Wouter-Michiel Vierdag, Niels Volkmann, Carolina Wählby, Siyuan Steven Wang, Ziv Rafael Yaniv, Caterina Strambio-De-Castilla
Harmonizing the Generation and Pre-publication Stewardship of FAIR Image data. ArXiv (2024)
Magdalena Matusiak, John W Hickey, David G P van IJzendoorn, Guolan Lu, Lukasz Kidziński, Shirley Zhu, Deana R C Colburg, Bogdan Luca, Darci J Phillips, Sky W Brubaker, Gregory W Charville, Jeanne Shen, Kyle M Loh, Derick K Okwan-Duodu, Garry P Nolan, Aaron M Newman, Robert B West, Matt van de Rijn
Spatially Segregated Macrophage Populations Predict Distinct Outcomes In Colon Cancer. Cancer discovery (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Magdalena Matusiak, John W Hickey, David G P van IJzendoorn, Guolan Lu, Lukasz Kidziński, Shirley Zhu, Deana R C Colburg, Bogdan Luca, Darci J Phillips, Sky W Brubaker, Gregory W Charville, Jeanne Shen, Kyle M Loh, Derick K Okwan-Duodu, Garry P Nolan, Aaron M Newman, Robert B West, Matt van de Rijn
Spatially Segregated Macrophage Populations Predict Distinct Outcomes in Colon Cancer. Cancer discovery 14 (8) (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Katy Börner, Philip D Blood, Jonathan C Silverstein, Matthew Ruffalo, Sarah A Teichmann, Gloria S Pryhuber, Ravi S Misra, Jeffrey M Purkerson, Jean Fan, John W Hickey, Gesmira Molla, Chuan Xu, Yun Zhang, Griffin M Weber, Yashvardhan Jain, Danial Qaurooni, Yongxin Kong, null null, Andreas Bueckle, Bruce W Herr
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv : the preprint server for biology (2024)
Magdalena Matusiak, John W Hickey, David G P van IJzendoorn, Guolan Lu, Lukasz Kidziński, Shirley Zhu, Deana R C Colburg, Bogdan Luca, Darci J Phillips, Sky W Brubaker, Gregory W Charville, Jeanne Shen, Kyle M Loh, Derick K Okwan-Duodu, Garry P Nolan, Aaron M Newman, Robert B West, Matt van de Rijn
Spatially Segregated Macrophage Populations Predict Distinct Outcomes in Colon Cancer. Cancer discovery 14 (8) (2024)
Sanjay Jain, Liming Pei, Jeffrey M Spraggins, Michael Angelo, James P Carson, Nils Gehlenborg, Fiona Ginty, Joana P Gonçalves, James S Hagood, John W Hickey, Michael P Snyder, Louise C Laurent, Shin Lin, Yiing Lin, Huiping Liu, Alexandra Naba, Ernesto S Nakayasu, Wei-Jun Qian, Andrea J Radtke, Paul Robson, Brent R Stockwell, Raf Van de Plas, Ioannis S Vlachos, Mowei Zhou, null null, Katy Börner, Michael Paul Snyder
Author Correction: Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP). Nature cell biology (2024)
Magdalena Matusiak, John W Hickey, David G P van IJzendoorn, Guolan Lu, Lukasz Kidziński, Shirley Zhu, Deana R C Colburg, Bogdan Luca, Darci J Phillips, Sky W Brubaker, Gregory W Charville, Jeanne Shen, Kyle M Loh, Derick K Okwan-Duodu, Garry P Nolan, Aaron M Newman, Robert B West, Matt van de Rijn
Spatially Segregated Macrophage Populations Predict Distinct Outcomes in Colon Cancer. Cancer discovery 14 (8) (2024)
Sanjay Jain, Liming Pei, Jeffrey M Spraggins, Michael Angelo, James P Carson, Nils Gehlenborg, Fiona Ginty, Joana P Gonçalves, James S Hagood, John W Hickey, Michael P Snyder, Louise C Laurent, Shin Lin, Yiing Lin, Huiping Liu, Alexandra Naba, Ernesto S Nakayasu, Wei-Jun Qian, Andrea J Radtke, Paul Robson, Brent R Stockwell, Raf Van de Plas, Ioannis S Vlachos, Mowei Zhou, null null, Katy Börner, Michael Paul Snyder
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP). Nature cell biology (2023)
Magdalena Matusiak, John W Hickey, Bogdan Luca, Guolan Lu, Lukasz Kidzinski, Shirley Zhu, Deana Colburg, Darci J Phillips, Sky Brubaker, Gregory Charville, Jeanne Shen, Garry P Nolan, Aaron M Newman, Robert West, Matt van de Rijn
A spatial map of human macrophage niches reveals context-dependent macrophage functions in colon and breast cancer. Research square (2023)
John W Hickey, Eran Agmon, Nina Horowitz, Matthew Lamore, John Sunwoo, Markus W Covert, Garry P Nolan
Integrating Multiplexed Imaging and Multiscale Modeling Identifies Tumor Phenotype Transformation as a Critical Component of Therapeutic T Cell Efficacy. bioRxiv : the preprint server for biology (2023)
Yashvardhan Jain, Leah L Godwin, Yingnan Ju, Naveksha Sood, Ellen M Quardokus, Andreas Bueckle, Teri Longacre, Aaron Horning, Yiing Lin, Edward D Esplin, John W Hickey, Michael Paul Snyder, Nathan Heath Patterson, Jeffrey M Spraggins, Katy Börner
Segmentation of human functional tissue units in support of a Human Reference Atlas. Communications biology 6 (1) (2023)
John W Hickey, Eran Agmon, Nina Horowitz, Matthew Lamore, John Sunwoo, Markus W Covert, Garry P Nolan
Integrating Multiplexed Imaging and Multiscale Modeling Identifies Tumor Phenotype Transformation as a Critical Component of Therapeutic T Cell Efficacy. bioRxiv : the preprint server for biology (2023)
John W Hickey, Eran Agmon, Nina Horowitz, Matthew Lamore, John Sunwoo, Markus W Covert, Garry P Nolan
Integrating Multiplexed Imaging and Multiscale Modeling Identifies Tumor Phenotype Transformation as a Critical Component of Therapeutic T Cell Efficacy. bioRxiv : the preprint server for biology (2023)
John W Hickey, Winston R Becker, Stephanie A Nevins, Aaron Horning, Almudena Espin Perez, Chenchen Zhu, Bokai Zhu, Bei Wei, Roxanne Chiu, Derek C Chen, Daniel L Cotter, Edward D Esplin, Annika K Weimer, Chiara Caraccio, Vishal Venkataraaman, Christian M Schürch, Sarah Black, Maria Brbic, Kaidi Cao, Shuxiao Chen, Weiruo Zhang, Emma Monte, Nancy R Zhang, Zongming Ma, Jure Leskovec, Zhengyan Zhang, Shin Lin, Teri Longacre, Sylvia K Plevritis, Yiing Lin, Garry P Nolan, William J Greenleaf, Michael Paul Snyder
Organization of the human intestine at single-cell resolution. Nature 619 (7970) (2023)
Ellen M Quardokus, Diane C Saunders, Elizabeth McDonough, John W Hickey, Christopher Werlein, Christine Surrette, Presha Rajbhandari, Anna Martinez Casals, Hua Tian, Lisa Lowery, Elizabeth K Neumann, Frida Björklund, Taruna V Neelakantan, Joshua Croteau, Anne E Wiblin, Jeremy Fisher, April J Livengood, Karen G Dowell, Jonathan C Silverstein, Jeffrey M Spraggins, Gloria S Pryhuber, Gail Deutsch, Fiona Ginty, Garry P Nolan, Simon Melov, Danny D Jonigk, Michael A Caldwell, Ioannis S Vlachos, Werner Muller, Nils Gehlenborg, Brent R Stockwell, Emma Lundberg, Michael Paul Snyder, Ronald N Germain, Jeannie M Camarillo, Michael P Snyder, Katy Börner, Andrea J Radtke
Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging. Nature methods (2023)
Magdalena Matusiak, John W Hickey, Bogdan Luca, Guolan Lu, Lukasz Kidzinski, Shirley Zhu, Deana Colburg, Darci J Phillips, Sky Brubaker, Gregory Charville, Jeanne Shen, Garry P Nolan, Aaron M Newman, Robert West, Matt van de Rijn
A spatial map of human macrophage niches reveals context-dependent macrophage functions in colon and breast cancer. Research square (2023)
Magdalena Matusiak, John W Hickey, Bogdan Luca, Guolan Lu, Lukasz Kidzinski, Shirley Zhu, Deana Colburg, Darci J Phillips, Sky Brubaker, Gregory Charville, Jeanne Shen, Garry P Nolan, Aaron M Newman, Robert West, Matt van de Rijn
A spatial map of human macrophage niches reveals context-dependent macrophage functions in colon and breast cancer. Research square (2023)
John W Hickey, Eran Agmon, Nina Horowitz, Matthew Lamore, John Sunwoo, Markus W Covert, Garry P Nolan
Integrating Multiplexed Imaging and Multiscale Modeling Identifies Tumor Phenotype Transformation as a Critical Component of Therapeutic T Cell Efficacy. bioRxiv : the preprint server for biology (2023)
Christopher Alvarez-Breckenridge, Kristin G Anderson, Ana Luísa Correia, Shadhmer Demehri, Huy Q Dinh, Karen Olivia Dixon, Gavin P Dunn, Laura Evgin, Jérémy Goc, Zinaida Good, Nir Hacohen, Patrick Han, Pavel Hanč, John W Hickey, Kelly Kersten, Beiyun C Liu, Aitziber Buque, Yuxuan 'Phoenix' Miao, J Justin Milner, Yuri Pritykin, Ferdinando Pucci, Nicole E Scharping, Lisa Sudmeier, Yufei Wang, Andreas Wieland, Michelle M Williams
Lessons for the Next Generation of Scientists from the Second Annual Arthur and Sandra Irving Cancer Immunology Symposium. Cancer immunology research (2023)
Eric Munger, John W Hickey, Amit K Dey, Mohsin Saleet Jafri, Jason M Kinser, Nehal N Mehta
Application of machine learning in understanding atherosclerosis: Emerging insights. APL bioengineering 5 (1) (2021)
Julia Kennedy-Darling, Salil S Bhate, John W Hickey, Sarah Black, Graham L Barlow, Gustavo Vazquez, Vishal G Venkataraaman, Nikolay Samusik, Yury Goltsev, Christian M Schürch, Garry P Nolan
Highly multiplexed tissue imaging using repeated oligonucleotide exchange reaction. European journal of immunology 51 (5) (2021)